chr19 : 991,298 991,443
145 bp 100 TFs 2 linked genes
This 145 bp open chromatin element is linked to WDR18 and GRIN3B and is bound by 100 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
WDR18 7.0 kb Proximal Proximity
GRIN3B 9.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:986,298 – 996,443
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 115 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 134 bp overlap
ChIP K-562 GSE120104.AGO1.K-562 116 bp overlap
ChIP K562 ENCFF025NLP 145 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 89 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 63 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 145 bp overlap
BCL11A 2 datasets
ChIP HEK293 ENCFF294OHB 145 bp overlap
ChIP HEK293 ENCSR021DJC.BCL11A.HEK293 80 bp overlap
BCL11B 2 datasets
ChIP HEK293 ENCFF859UHP 145 bp overlap
ChIP HEK293 ENCSR770PQN.BCL11B.HEK293 87 bp overlap
BRD4 3 datasets
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 78 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 59 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 59 bp overlap
CBFB 1 dataset
ChIP K562 ENCFF145YWG 145 bp overlap
CBX5 1 dataset
ChIP K-562 ENCSR272JAT.CBX5.K-562 104 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 53 bp overlap
CHD2 2 datasets
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 134 bp overlap
ChIP K-562 ENCSR000EHD.CHD2.K-562 145 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 53 bp overlap
CTCF 2 datasets
ChIP MM1-S GSE43743.CTCF.MM1-S 56 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 114 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 145 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 102 bp overlap
EGR1 6 datasets
ChIP Ishikawa ENCFF550FKT 145 bp overlap
ChIP Ishikawa ENCSR000BSQ.EGR1.Ishikawa 130 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 106 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 127 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 145 bp overlap
ChIP K562 ENCFF006PJY 145 bp overlap
ELF1 1 dataset
ChIP K562 ENCFF496AKI 145 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 137 bp overlap
ERG 1 dataset
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 115 bp overlap
ESR1 3 datasets
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 144 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 53 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 53 bp overlap
FIP1L1 5 datasets
ChIP K-562 ENCSR177DNR.FIP1L1.K-562 76 bp overlap
ChIP K-562 GSE120104.FIP1L1.K-562 79 bp overlap
ChIP K562 ENCFF002WKI 119 bp overlap
ChIP K562 ENCFF002WKI 145 bp overlap
ChIP K562 ENCFF363ZMN 145 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 145 bp overlap
GATA6 1 dataset
ChIP PATU8988 GSE47535.GATA6.PATU8988 145 bp overlap
GTF2F1 2 datasets
ChIP K-562 GSE120104.GTF2F1.K-562 145 bp overlap
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 145 bp overlap
HCFC1 1 dataset
ChIP K-562 ENCSR000EFN.HCFC1.K-562 126 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 105 bp overlap
ChIP K562 ENCFF928TKZ 145 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 115 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 94 bp overlap
HDGF 3 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 145 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 120 bp overlap
ChIP K562 ENCFF682FBH 145 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 145 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 50 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 126 bp overlap
HMGN3 2 datasets
ChIP K562 ENCFF083BIJ 145 bp overlap
ChIP K562 ENCFF083BIJ 109 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 145 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 145 bp overlap
IRF1 1 dataset
ChIP K-562 ENCSR000EGT.IRF1.K-562 139 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 99 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 128 bp overlap
KLF13 1 dataset
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 145 bp overlap
KLF5 2 datasets
ChIP ESO-26 GSE132680.KLF5.ESO-26 145 bp overlap
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 145 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 145 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 145 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 137 bp overlap
ChIP HEK293 ENCFF588INF 145 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 145 bp overlap
MAF 1 dataset
Motif DE_24h DE_24h-MAF_MA1520.2 13 bp overlap
MAFA 1 dataset
Motif DE_24h DE_24h-MAFA_MA1521.2 13 bp overlap
MAX 6 datasets
ChIP Ishikawa ENCFF064TDQ 145 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 135 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 128 bp overlap
ChIP K562 ENCFF110LJS 145 bp overlap
ChIP K562 ENCFF524IJO 145 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 145 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 145 bp overlap
ChIP K562 ENCFF333ZIV 145 bp overlap
ChIP K562 ENCFF982GSZ 145 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR914NEI.MTA3.K-562 94 bp overlap
ChIP K-562 ENCSR180NCY.MTA3.K-562 98 bp overlap
MYC 3 datasets
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 75 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 97 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 63 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 65 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 132 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 122 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 145 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 77 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 74 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 130 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 145 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 145 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 125 bp overlap
ChIP K562 ENCFF167YID 145 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 137 bp overlap
NRF1 4 datasets
ChIP K-562 ENCSR837EYC.NRF1.K-562 145 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 131 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 130 bp overlap
ChIP K562 ENCFF130SGK 145 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 53 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 145 bp overlap
PCBP1 3 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 144 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 117 bp overlap
ChIP K562 ENCFF382QWQ 98 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 89 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 145 bp overlap
ChIP K562 ENCFF648YPL 145 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 93 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 110 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 126 bp overlap
RB1 2 datasets
ChIP K-562 ENCSR670JDQ.RB1.K-562 112 bp overlap
ChIP K562 ENCFF627ZBG 145 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 115 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 99 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 142 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 145 bp overlap
RUNX1 3 datasets
ChIP ME-1 GSE46044.RUNX1.ME-1 53 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 145 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 145 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 134 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 117 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 72 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 121 bp overlap
SMARCA4 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 129 bp overlap
SMARCA5 2 datasets
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 78 bp overlap
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 56 bp overlap
SP1 3 datasets
ChIP HEK293T ERP007114.SP1.HEK293T 145 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 119 bp overlap
ChIP K562 ENCFF365HQT 145 bp overlap
SP2 1 dataset
ChIP HEK293T ERP007114.SP2.HEK293T 93 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 145 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 145 bp overlap
TCF12 2 datasets
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 145 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 132 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 145 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 145 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 110 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 71 bp overlap
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 145 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 145 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 113 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 117 bp overlap
YY1 1 dataset
ChIP GM12892 ENCSR000BLT.YY1.GM12892 103 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 145 bp overlap
ZBTB7A 4 datasets
ChIP Ishikawa ENCFF191NFH 145 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 130 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 140 bp overlap
ChIP K562 ENCFF579ZGM 145 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 113 bp overlap
ZNF148 3 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 145 bp overlap
ChIP K-562 GSE121133.ZNF148.K-562 51 bp overlap
ChIP K562 ENCFF352SDL 145 bp overlap
ZNF331 1 dataset
Motif DE_24h DE_24h-ZNF331_MA1726.2 10 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 145 bp overlap