chr18 : 13,279,726 13,280,861
1,135 bp 131 TFs 1 linked gene
This 1.1 kb open chromatin element is linked to ENSG00000279275 and is bound by 131 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000279275 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:13,274,726 – 13,285,861
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
131 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 275 bp overlap
ARNTL 1 dataset
ChIP U2OS_cordycepin GSE130506.ARNTL.U2OS_cordycepin 366 bp overlap
ATF7 2 datasets
ChIP GM12878 ENCFF037PYH 84 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 219 bp overlap
BARX2 1 dataset
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 63 bp overlap
BCL6 1 dataset
ChIP CD4 GSE59933.BCL6.CD4 114 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 220 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 149 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 52 bp overlap
BRD2 1 dataset
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 346 bp overlap
BRD4 8 datasets
ChIP CLL_patient1 GSE109411.BRD4.CLL_patient1 542 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 270 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 503 bp overlap
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 275 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 226 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 226 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 694 bp overlap
ChIP SW480_16h_TNF-a GSE110473.BRD4.SW480_16h_TNF-a 302 bp overlap
CDKN1B 1 dataset
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 258 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 501 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 57 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 130 bp overlap
CRY1 3 datasets
ChIP U2OS GSE130602.CRY1.U2OS 541 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 520 bp overlap
ChIP U2OS_cordycepin GSE130506.CRY1.U2OS_cordycepin 291 bp overlap
CTCF 3 datasets
Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 240 bp overlap
ChIP heart_left-ventricle ENCSR544APK.CTCF.heart_left-ventricle 498 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 400 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 239 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 279 bp overlap
ChIP hESC GSE26097.EOMES.hESC 213 bp overlap
EZH2 3 datasets
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 210 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 245 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 779 bp overlap
FOS 2 datasets
Motif DE_60h DE_60h-FOS_MA1951.2 13 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 58 bp overlap
FOSL2 2 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 206 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 181 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 326 bp overlap
ChIP DE DE-FOXA2-1 335 bp overlap
ChIP DE DE-FOXA2-2 290 bp overlap
ChIP DE DE-FOXA2-2 443 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 136 bp overlap
GATA2 1 dataset
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 171 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 360 bp overlap
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 377 bp overlap
ChIP DE DE-GATA4-2 515 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 378 bp overlap
ChIP DE DE-GATA6-1 262 bp overlap
ChIP DE DE-GATA6-2 450 bp overlap
ChIP DE DE-GATA6-2 584 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 300 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 262 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 448 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 447 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 303 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 326 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 416 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 380 bp overlap
HOXB9 1 dataset
Motif DE_60h DE_60h-HOXB9_MA1503.2 9 bp overlap
HOXC10 1 dataset
Motif DE_60h DE_60h-HOXC10_MA0905.2 9 bp overlap
HOXC11 1 dataset
Motif DE_60h DE_60h-HOXC11_MA0651.3 11 bp overlap
HOXC12 1 dataset
Motif DE_60h DE_60h-HOXC12_MA0906.2 10 bp overlap
HOXC9 1 dataset
Motif DE_60h DE_60h-HOXC9_MA0485.3 9 bp overlap
HOXD11 1 dataset
Motif DE_60h DE_60h-HOXD11_MA0908.2 9 bp overlap
HOXD12 1 dataset
Motif DE_60h DE_60h-HOXD12_MA0873.2 10 bp overlap
Hoxa11 1 dataset
Motif DE_60h DE_60h-Hoxa11_MA0911.2 9 bp overlap
IKZF2 2 datasets
ChIP GM12878 ENCFF918AID 167 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 55 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 181 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 309 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 250 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 501 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 343 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 366 bp overlap
KLF1 1 dataset
Motif DE_60h DE_60h-KLF1_MA0493.3 8 bp overlap
KLF10 1 dataset
Motif DE_60h DE_60h-KLF10_MA1511.2 9 bp overlap
KLF11 1 dataset
Motif DE_60h DE_60h-KLF11_MA1512.2 10 bp overlap
KLF2 1 dataset
Motif DE_60h DE_60h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_60h DE_60h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_60h DE_60h-KLF6_MA1517.2 9 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 210 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 264 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 490 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 482 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 160 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 206 bp overlap
MED12 2 datasets
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 83 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 57 bp overlap
MED26 2 datasets
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 311 bp overlap
ChIP U2OS_SHEP400 GSE73742.MED26.U2OS_SHEP400 350 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 178 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 57 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 172 bp overlap
MTF1 1 dataset
Motif DE_60h DE_60h-MTF1_MA0863.1 14 bp overlap
MYB 1 dataset
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 208 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 201 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 105 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 162 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 534 bp overlap
NFATC2 3 datasets
ChIP CD4 GSE116695.NFATC2.CD4 133 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 139 bp overlap
ChIP CD4_fly-DNA GSE116695.NFATC2.CD4_fly-DNA 209 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 212 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 121 bp overlap
NR2C1 1 dataset
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
NR3C1 1 dataset
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 367 bp overlap
NRL 1 dataset
Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap
Nfe2l2 1 dataset
Motif DE_60h DE_60h-Nfe2l2_MA0150.3 11 bp overlap
Nr1H2 1 dataset
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
ONECUT3 1 dataset
Motif DE_60h DE_60h-ONECUT3_MA0757.2 12 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 322 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 250 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 273 bp overlap
PGR 3 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 374 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 413 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 158 bp overlap
POLR2A 1 dataset
ChIP PFSK-1 ENCFF576NIT 557 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 650 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 92 bp overlap
RELA 1 dataset
Motif DE_60h DE_60h-RELA_MA0107.1 10 bp overlap
REST 2 datasets
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 213 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 215 bp overlap
RUNX1 1 dataset
ChIP SKH1 GSE87283.RUNX1.SKH1 179 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 177 bp overlap
RUVBL2 3 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 545 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 423 bp overlap
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 948 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 176 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 433 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 477 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 363 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 494 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 416 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 272 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 306 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 445 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1135 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 162 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 217 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 218 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 523 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 187 bp overlap
SMARCC1 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 474 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 227 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 58 bp overlap
SOX10 1 dataset
Motif DE_60h DE_60h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 207 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 395 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 318 bp overlap
SREBF1 1 dataset
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_60h DE_60h-SREBF2_MA0596.1 10 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 475 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 131 bp overlap
Sox11 1 dataset
Motif DE_60h DE_60h-Sox11_MA0869.3 8 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 301 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 274 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 258 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1575.2 17 bp overlap
TP53 1 dataset
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 216 bp overlap
Wt1 1 dataset
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
XBP1 1 dataset
Motif DE_60h DE_60h-XBP1_MA0844.2 11 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 146 bp overlap
ZFP14 1 dataset
Motif DE_60h DE_60h-ZFP14_MA1972.1 15 bp overlap
ZNF135 1 dataset
Motif DE_60h DE_60h-ZNF135_MA1587.1 14 bp overlap
ZNF157 1 dataset
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
ZNF217 2 datasets
ChIP GM12878 ENCFF978IGL 240 bp overlap
ChIP GM12878 ENCSR764CZW.ZNF217.GM12878 108 bp overlap
ZNF257 1 dataset
Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap
ZNF75A 2 datasets
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN16 1 dataset
Motif DE_60h DE_60h-ZSCAN16_MA2100.1 18 bp overlap
Zic3 1 dataset
Motif DE_60h DE_60h-Zic3_MA0697.3 7 bp overlap