chr17 : 66,549,271 66,549,513
242 bp 95 TFs 0 linked genes
This 242 bp open chromatin element has no linked target genes and is bound by 95 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:66,544,271 – 66,554,513
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_EGF GSE40632.AFF4.HeLa_EGF 150 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 242 bp overlap
ARID1A 5 datasets
ChIP 12Z GSE129781.ARID1A.12Z 242 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 242 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 239 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 242 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 242 bp overlap
ARNTL 3 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 77 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 77 bp overlap
ChIP U2OS_trough_DMSO GSE85096.ARNTL.U2OS_trough_DMSO 112 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 242 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 241 bp overlap
BRD2 4 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 229 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD2.MDA-MB-231_DMSO 153 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD2.MDA-MB-231_DMSO_rDNA 153 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 242 bp overlap
BRD4 15 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 242 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 77 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 133 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 98 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 162 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 153 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 116 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 116 bp overlap
ChIP MOLT-4_DMSO GSE79288.BRD4.MOLT-4_DMSO 207 bp overlap
ChIP OVCAR-3_DMSO GSE77568.BRD4.OVCAR-3_DMSO 114 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 82 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 137 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 242 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 242 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 178 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_DMSO GSE116879.BRD9.MDA-MB-231_DMSO 115 bp overlap
CBFB 1 dataset
ChIP SaOS-2 GSE76937.CBFB.SaOS-2 167 bp overlap
CDKN1B 1 dataset
ChIP MDA-BoM-1833_shp27 GSE112444.CDKN1B.MDA-BoM-1833_shp27 177 bp overlap
CEBPB 2 datasets
ChIP A549 ENCFF797MXZ 242 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 126 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 92 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 65 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 242 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 242 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 228 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 212 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 242 bp overlap
ChIP BLaER1 ENCFF274GAT 189 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 242 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 96 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX_EGF GSE40632.ELL2.HeLa_DOX_EGF 172 bp overlap
EP300 5 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 54 bp overlap
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 209 bp overlap
ChIP SK-N-SH ENCFF451CNG 152 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 234 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 173 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 242 bp overlap
ChIP breast_tumor_Male_5 GSE104399.ESR1.breast_tumor_Male_5 162 bp overlap
ETS1 1 dataset
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 220 bp overlap
FOSL2 3 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 78 bp overlap
ChIP SK-N-SH ENCFF127ZDW 99 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 149 bp overlap
FOXM1 1 dataset
ChIP SK-N-SH ENCSR000BTB.FOXM1.SK-N-SH 147 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 144 bp overlap
GATA2 3 datasets
ChIP ESF GSE108408.GATA2.ESF 147 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 71 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 68 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 233 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 217 bp overlap
GATA6 8 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 242 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 219 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 221 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 242 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 218 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 191 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 189 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 242 bp overlap
GRHL2 1 dataset
ChIP OVCA429 GSE71018.GRHL2.OVCA429 151 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 242 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 129 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 242 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 242 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 134 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 81 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 154 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 173 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 204 bp overlap
MAX 4 datasets
ChIP A549 ENCFF310XGQ 242 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 96 bp overlap
ChIP SK-N-SH ENCFF285LXR 242 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 224 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 69 bp overlap
MED26 3 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 223 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 212 bp overlap
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 175 bp overlap
MEF2A 1 dataset
ChIP SK-N-SH ENCSR000BVC.MEF2A.SK-N-SH 140 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 135 bp overlap
MYB 1 dataset
ChIP Jurkat GSE59657.MYB.Jurkat 73 bp overlap
MYCN 5 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 185 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 151 bp overlap
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 72 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 187 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 187 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 163 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 242 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 81 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 174 bp overlap
NELFCD 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.NELFCD.DLD-1_NELFCD-AID 242 bp overlap
NFE2L2 5 datasets
ChIP A-549 GSE113497.NFE2L2.A-549 183 bp overlap
ChIP BEAS-2B GSE145834.NFE2L2.BEAS-2B 125 bp overlap
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 242 bp overlap
ChIP IMR-90 ENCFF059WEE 109 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 88 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 188 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 179 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 158 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 207 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 210 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 93 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 166 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 197 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 242 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 242 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 128 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 237 bp overlap
POLR2A 1 dataset
ChIP SK-N-SH ENCFF683PFH 209 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 214 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 242 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 242 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 130 bp overlap
RAD21 1 dataset
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 242 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 197 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 187 bp overlap
RELA 3 datasets
ChIP 786-O GSE109953.RELA.786-O 97 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 118 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 65 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCFF861MKH 234 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 63 bp overlap
RUVBL2 1 dataset
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 180 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 152 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 181 bp overlap
SIN3A 2 datasets
ChIP SK-N-SH ENCFF931NFD 133 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 242 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 211 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 192 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 80 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 97 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 203 bp overlap
SMARCA4 6 datasets
ChIP J-Lat_GFP-Clone-A72_DMSO GSE100266.SMARCA4.J-Lat_GFP-Clone-A72_DMSO 188 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 103 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 131 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 242 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 204 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 140 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 242 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 242 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 201 bp overlap
SS18 1 dataset
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 229 bp overlap
STAT3 1 dataset
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 57 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 64 bp overlap
TAF1 5 datasets
ChIP H1 ENCFF478SZO 242 bp overlap
ChIP SK-N-SH ENCFF630ERV 145 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 103 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 96 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 213 bp overlap
TCF12 4 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 133 bp overlap
ChIP Ishikawa ENCSR000BUV.TCF12.Ishikawa 62 bp overlap
ChIP SK-N-SH ENCFF147AHB 242 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 118 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 208 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 205 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 186 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 242 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 210 bp overlap
TWIST1 5 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 242 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 227 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 242 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 242 bp overlap
ChIP SHEP-21N_DOX_24H GSE80151.TWIST1.SHEP-21N_DOX_24H 242 bp overlap
USF1 2 datasets
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 77 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 61 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 142 bp overlap
ZBTB33 2 datasets
ChIP SK-N-SH ENCFF667JYU 159 bp overlap
ChIP SK-N-SH ENCSR000BTS.ZBTB33.SK-N-SH 95 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 126 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 199 bp overlap