chr15 : 43,492,229 – 43,492,558
329 bp 99 TFs 1 linked gene
This 329 bp open chromatin element is linked to TP53BP1 and is bound by 99 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TP53BP1 568 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:43,487,229 – 43,497,558
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K-562 ENCSR426URK.AFF1.K-562 198 bp overlap
AR 1 dataset
ChIP prostate_1798_T GSE130408.AR.prostate_1798_T 219 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 259 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 298 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 329 bp overlap
BCOR 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 136 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 188 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 196 bp overlap
BRD4 2 datasets
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 107 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 106 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 290 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 95 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 156 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 150 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 269 bp overlap
CREBBP 1 dataset
ChIP PC-3 GSE147455.CREBBP.PC-3 75 bp overlap
ELF1 3 datasets
ChIP K-562 ENCSR000BMD.ELF1.K-562 168 bp overlap
ChIP K562 ENCFF496AKI 145 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 136 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 310 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 310 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 282 bp overlap
ELF4 1 dataset
ChIP K-562 ENCSR638QHV.ELF4.K-562 285 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 329 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 280 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 229 bp overlap
ERG 1 dataset
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 226 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 115 bp overlap
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 286 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 196 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 89 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 329 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 150 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 105 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 62 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap
ChIP DE DE-FOXA2-1 329 bp overlap
ChIP DE DE-FOXA2-2 329 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 70 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 234 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 137 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 209 bp overlap
GABPA 2 datasets
ChIP VCaP GSE49091.GABPA.VCaP 160 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 104 bp overlap
GABPB1 1 dataset
ChIP K-562 ENCSR138YYY.GABPB1.K-562 220 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
GATA4 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 329 bp overlap
ChIP DE DE-GATA4-2 329 bp overlap
ChIP foregut GSE117136.GATA4.foregut 329 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 296 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 329 bp overlap
ChIP DE DE-GATA6-2 329 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 311 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 329 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 271 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 329 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 329 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 329 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 329 bp overlap
ChIP foregut GSE117136.GATA6.foregut 279 bp overlap
HDAC1 1 dataset
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 53 bp overlap
HDAC2 5 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 234 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 197 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 92 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 275 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 143 bp overlap
HOXB13 1 dataset
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 202 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 182 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 176 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 147 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 54 bp overlap
KMT2A 4 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 101 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 235 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 142 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 329 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 204 bp overlap
MED1 2 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 59 bp overlap
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 185 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 97 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 125 bp overlap
NANOG 7 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 329 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 208 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 217 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 329 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 284 bp overlap
ChIP hESC GSE18292.NANOG.hESC 329 bp overlap
ChIP hESC GSE20650.NANOG.hESC 215 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 197 bp overlap
NEUROG2 3 datasets
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 232 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 177 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 259 bp overlap
NFATC2 2 datasets
ChIP CD4 GSE116695.NFATC2.CD4 185 bp overlap
ChIP CD4_CD28-ab GSE116695.NFATC2.CD4_CD28-ab 202 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 134 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B GSE145834.NFE2L2.BEAS-2B 156 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 134 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 221 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 222 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 182 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 207 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF566JSR 97 bp overlap
ChIP H1 ENCFF770YBQ 299 bp overlap
POU5F1 9 datasets
ChIP H1 ENCFF698ZAP 188 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 321 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 329 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 223 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 167 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 255 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 273 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 233 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 196 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 52 bp overlap
RAD21 1 dataset
ChIP neural cell ENCFF564MOT 329 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 114 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 78 bp overlap
SAP30 2 datasets
ChIP H1 ENCFF149IOE 75 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 240 bp overlap
SIN3A 5 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 211 bp overlap
ChIP H1 ENCFF042ZSL 124 bp overlap
ChIP K-562 ENCSR920BLG.SIN3A.K-562 143 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 268 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 214 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 329 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 329 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 329 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 165 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 329 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 240 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 242 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 280 bp overlap
SMARCB1 3 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 250 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 329 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 232 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 318 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 329 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 222 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 203 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 275 bp overlap
SOX2 2 datasets
ChIP hESC GSE18292.SOX2.hESC 290 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 288 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 303 bp overlap
SPDEF 1 dataset
ChIP MCF-7 ENCSR042GSX.SPDEF.MCF-7 229 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 81 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 86 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 84 bp overlap
SRF 1 dataset
ChIP K-562 ENCSR000BLK.SRF.K-562 160 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 181 bp overlap
ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 152 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 315 bp overlap
TAF1 2 datasets
ChIP WA01 ENCSR000BHO.TAF1.WA01 248 bp overlap
ChIP neural cell ENCFF468SPD 229 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 155 bp overlap
TBP 4 datasets
ChIP H1 ENCFF859IIO 325 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 161 bp overlap
ChIP hESC GSE122298.TBP.hESC 211 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 190 bp overlap
TBX5 1 dataset
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 187 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 174 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 248 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF254RJL 125 bp overlap
TP63 1 dataset
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 121 bp overlap
YY1 2 datasets
ChIP ALL GSE145549.YY1.ALL 161 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 265 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 279 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 140 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 110 bp overlap
ZNF148 1 dataset
ChIP K-562 ENCSR018MSO.ZNF148.K-562 61 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 129 bp overlap
ChIP HEK293 ENCFF784SLD 129 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 53 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 265 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 201 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 69 bp overlap
ZSCAN16 1 dataset
ChIP HEK293 GSE76494.ZSCAN16.HEK293 166 bp overlap
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