chr12 : 70,251,242 70,251,469
227 bp 111 TFs 2 linked genes
This 227 bp open chromatin element is linked to CNOT2 and PRANCR and is bound by 111 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CNOT2 7.8 kb Proximal Proximity
PRANCR 7.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:70,246,242 – 70,256,469
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 227 bp overlap
AR 2 datasets
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 137 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 99 bp overlap
ARID3A 2 datasets
ChIP K-562 ENCSR000EFY.ARID3A.K-562 227 bp overlap
ChIP K562 ENCFF728CDS 226 bp overlap
ARNT 1 dataset
ChIP K-562 ENCSR613NUC.ARNT.K-562 135 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 193 bp overlap
ATF2 6 datasets
ChIP HEK293 ENCFF194VKZ 87 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 227 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 133 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 227 bp overlap
ChIP K562 ENCFF139ZZG 227 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 162 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 220 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 173 bp overlap
CHAMP1 3 datasets
ChIP K-562 ENCSR065XVO.CHAMP1.K-562 227 bp overlap
ChIP K-562 ENCSR315NNL.CHAMP1.K-562 227 bp overlap
ChIP K562 ENCFF860ZIW 227 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 175 bp overlap
CTBP1 1 dataset
ChIP HEK293T ENCSR237TFX.CTBP1.HEK293T 59 bp overlap
CTCF 1 dataset
ChIP gastrocnemius medialis ENCFF468QWC 227 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 208 bp overlap
ChIP K562 ENCFF775HUO 222 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 227 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 224 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 191 bp overlap
EP300 1 dataset
ChIP K562 ENCFF226VMS 70 bp overlap
EP400 1 dataset
ChIP K-562 ENCSR817QKV.EP400.K-562 227 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
EZH1 2 datasets
ChIP ProEs GSE59087.EZH1.ProEs 92 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 52 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 180 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 94 bp overlap
FOXM1 1 dataset
ChIP K-562 ENCSR429QPP.FOXM1.K-562 227 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 227 bp overlap
ChIP erythroblast ENCFF867JAR 227 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 100 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 60 bp overlap
GATA4 4 datasets
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 160 bp overlap
ChIP foregut GSE117136.GATA4.foregut 109 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 181 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 123 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 172 bp overlap
ChIP DE DE-GATA6-2 197 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 227 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 227 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 211 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 227 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 227 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 227 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 196 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 98 bp overlap
GFI1B 1 dataset
ChIP HEK293 ENCSR445PDR.GFI1B.HEK293 181 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 227 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 227 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 199 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 227 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 227 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 227 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 227 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 179 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 227 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 227 bp overlap
ChIP K562 ENCFF055GAZ 227 bp overlap
ChIP K562 ENCFF317JJX 227 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 202 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 227 bp overlap
ChIP K562 ENCFF348IBL 227 bp overlap
ChIP K562 ENCFF771OHZ 227 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 62 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 204 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 118 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 225 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 227 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 227 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 227 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 227 bp overlap
KDM1A 2 datasets
ChIP K-562 ENCSR908CMW.KDM1A.K-562 227 bp overlap
ChIP K562 ENCFF128TYE 227 bp overlap
LEF1 1 dataset
ChIP K-562 ENCSR343ELW.LEF1.K-562 227 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 185 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 227 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 77 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 227 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 227 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 227 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 173 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 227 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 227 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 92 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 227 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 168 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 140 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 227 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 227 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 170 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 215 bp overlap
POLR2H 1 dataset
ChIP K562 ENCFF377NHG 216 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 220 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 227 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 227 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 227 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 227 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 227 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF196WTG 212 bp overlap
RUNX1 1 dataset
ChIP THP-1 GSE79899.RUNX1.THP-1 166 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 227 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 186 bp overlap
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 125 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 195 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 183 bp overlap
SMC3 1 dataset
ChIP HEK293T_CRISPR GSE122299.SMC3.HEK293T_CRISPR 221 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 227 bp overlap
TAL1 1 dataset
ChIP K-562 ENCSR106FRG.TAL1.K-562 200 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 137 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 227 bp overlap
ChIP HEK293 ENCFF582MWI 184 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 227 bp overlap
ZBTB12 2 datasets
ChIP HEK293 ENCFF963HPT 227 bp overlap
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 227 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 131 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 227 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 227 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 166 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 181 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 127 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 227 bp overlap
ZFP91 1 dataset
ChIP K562 ENCFF501CDP 227 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 192 bp overlap
ZKSCAN5 1 dataset
ChIP HEK293T GSE78099.ZKSCAN5.HEK293T 227 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 116 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 125 bp overlap
ZNF143 1 dataset
ChIP MCF-7 GSE76454.ZNF143.MCF-7 192 bp overlap
ZNF148 2 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 227 bp overlap
ChIP K562 ENCFF352SDL 227 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 163 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 227 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 223 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 227 bp overlap
ZNF24 10 datasets
ChIP HEK293 ENCFF308WOW 223 bp overlap
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 227 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 227 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 227 bp overlap
ChIP K-562 ENCSR385AHH.ZNF24.K-562 227 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 227 bp overlap
ChIP K562 ENCFF497GLV 227 bp overlap
ChIP K562 ENCFF615YYW 227 bp overlap
ChIP K562 ENCFF781QQQ 227 bp overlap
ChIP K562 ENCFF877JCX 227 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 227 bp overlap
ZNF394 2 datasets
ChIP HEK293 ENCFF236OPX 227 bp overlap
ChIP HEK293 ENCSR125DNC.ZNF394.HEK293 227 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 227 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 178 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 184 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 227 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 59 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 221 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 204 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 175 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 193 bp overlap
ZSCAN30 3 datasets
ChIP HEK293 ENCFF082YBI 227 bp overlap
ChIP HEK293 ENCFF082YBI 99 bp overlap
ChIP HEK293 ENCSR768VNZ.ZSCAN30.HEK293 227 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 70 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 217 bp overlap
ZZZ3 1 dataset
ChIP K-562 ENCSR780BBJ.ZZZ3.K-562 148 bp overlap