chr1 : 15,797,793 15,798,244
451 bp 100 TFs 0 linked genes
This 451 bp open chromatin element has no linked target genes and is bound by 100 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:15,792,793 – 15,803,244
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AFF4 2 datasets
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 120 bp overlap
ChIP HeLa_DOX_EGF GSE40632.AFF4.HeLa_DOX_EGF 95 bp overlap
ARID1A 4 datasets
ChIP 12Z GSE129781.ARID1A.12Z 135 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 173 bp overlap
ChIP RMG-I GSE104545.ARID1A.RMG-I 451 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 161 bp overlap
ATF2 2 datasets
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 144 bp overlap
ChIP HepG2 ENCFF955VER 168 bp overlap
ATF3 5 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 53 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 59 bp overlap
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 119 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 125 bp overlap
ChIP K562 ENCFF604FPV 258 bp overlap
ATF4 1 dataset
ChIP K-562 ENCSR145TSJ.ATF4.K-562 160 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 407 bp overlap
ATOH8 1 dataset
ChIP A-549 ENCSR161CZA.ATOH8.A-549 248 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 451 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 147 bp overlap
ChIP K562 ENCFF343XWA 252 bp overlap
BRD4 18 datasets
ChIP 402-91 GSE111253.BRD4.402-91 82 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 202 bp overlap
ChIP HUVEC-C_TNF GSE53998.BRD4.HUVEC-C_TNF 308 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 345 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 345 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 220 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 248 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 205 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 179 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 86 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 297 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 279 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 325 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 293 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 451 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 132 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 350 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 172 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 328 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 201 bp overlap
ChIP K562 ENCFF673OEZ 398 bp overlap
CDK8 1 dataset
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 96 bp overlap
CEBPA 2 datasets
ChIP HepG2 ENCFF175DFS 146 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.CEBPA.Kasumi-1_CEBPA-ER 66 bp overlap
CEBPB 6 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 69 bp overlap
ChIP A549 ENCFF235AIY 130 bp overlap
ChIP HeLa-S3 ENCFF722WEG 137 bp overlap
ChIP HepG2 ENCFF536NTI 97 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 82 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 212 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 120 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 114 bp overlap
CHD4 1 dataset
ChIP A-549 ENCSR550SCU.CHD4.A-549 103 bp overlap
CREB1 4 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 94 bp overlap
ChIP A-549 ENCSR000BRC.CREB1.A-549 107 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 168 bp overlap
ChIP HepG2 ENCFF792THT 208 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 159 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 246 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 228 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF031ISE 161 bp overlap
ChIP BLaER1 ENCFF093OYK 150 bp overlap
ChIP BLaER1 ENCFF460KDD 126 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 142 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 273 bp overlap
EP300 2 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 377 bp overlap
ChIP A549 ENCFF960ZEI 238 bp overlap
ESR1 2 datasets
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 226 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 231 bp overlap
ETS1 2 datasets
ChIP 786-O GSE86092.ETS1.786-O 233 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 170 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 52 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 423 bp overlap
FOSB 2 datasets
ChIP A-549 ENCSR918GHT.FOSB.A-549 202 bp overlap
ChIP A549 ENCFF029EEU 286 bp overlap
FOSL2 3 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 153 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 257 bp overlap
ChIP A549 ENCFF195CES 227 bp overlap
FOXA1 2 datasets
ChIP A-549 ENCSR000BRD.FOXA1.A-549 106 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 152 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 448 bp overlap
ChIP DE DE-FOXA2-2 451 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 247 bp overlap
FOXF2 1 dataset
ChIP A549 ENCFF148XDC 314 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 451 bp overlap
ChIP A549 ENCFF226FVV 378 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 451 bp overlap
ChIP DE DE-GATA4-2 451 bp overlap
ChIP foregut GSE117136.GATA4.foregut 281 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 451 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 334 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 416 bp overlap
ChIP DE DE-GATA6-2 451 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 339 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 427 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 451 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 449 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 417 bp overlap
ChIP OACP4-C GSE132680.GATA6.OACP4-C 64 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 171 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 228 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 258 bp overlap
ChIP foregut GSE117136.GATA6.foregut 300 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 391 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 323 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 144 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 230 bp overlap
GLIS2 1 dataset
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 126 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 269 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 237 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 279 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 194 bp overlap
HIF1A 2 datasets
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 218 bp overlap
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 93 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 76 bp overlap
ChIP HepG2 ENCFF854JLR 132 bp overlap
HMGA2 1 dataset
ChIP A549 ENCFF624CAQ 104 bp overlap
HNF4A 1 dataset
ChIP KATO-III GSE114018.HNF4A.KATO-III 397 bp overlap
HOXA7 1 dataset
ChIP A549 ENCFF746ZBJ 150 bp overlap
HOXB5 2 datasets
ChIP A-549 ENCSR748HJZ.HOXB5.A-549 250 bp overlap
ChIP A549 ENCFF891VDO 230 bp overlap
IKZF1 1 dataset
ChIP K562 ENCFF771OHZ 272 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 241 bp overlap
ChIP A549 ENCFF191QZG 451 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 143 bp overlap
JUNB 1 dataset
ChIP A549 ENCFF251BPG 345 bp overlap
JUND 2 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 111 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 121 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 387 bp overlap
MAX 2 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 208 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 64 bp overlap
MED1 3 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 298 bp overlap
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 451 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 451 bp overlap
MXI1 1 dataset
ChIP HeLa-S3 ENCSR000ECU.MXI1.HeLa-S3 112 bp overlap
MYC 2 datasets
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 76 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 114 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 72 bp overlap
NR3C1 3 datasets
ChIP A-549 ENCSR116TFA.NR3C1.A-549 91 bp overlap
ChIP BEAS-2B_shNR3C1_TNF_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_TNF_IA1 212 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 151 bp overlap
NR5A2 3 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 301 bp overlap
ChIP A549 ENCFF834RVE 444 bp overlap
ChIP A549 ENCFF834RVE 244 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 312 bp overlap
PBX1 1 dataset
ChIP A549 ENCFF475JCE 118 bp overlap
PHIP 3 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 451 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 445 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 209 bp overlap
PRDM1 1 dataset
ChIP A549 ENCFF012KDW 83 bp overlap
RELA 7 datasets
ChIP 786-O GSE86092.RELA.786-O 235 bp overlap
ChIP BJAB_1h-activation GSE117250.RELA.BJAB_1h-activation 148 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 241 bp overlap
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 246 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 108 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 108 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 121 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 205 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 221 bp overlap
ChIP liver ENCFF807CIA 205 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 266 bp overlap
ChIP A549 ENCFF752ATT 352 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 120 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 385 bp overlap
SMAD3 6 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 195 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 214 bp overlap
ChIP MDA-MB-231_TGF-beta GSE92443.SMAD3.MDA-MB-231_TGF-beta 166 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 99 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 127 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 193 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 97 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 451 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 222 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 149 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 149 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 149 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 322 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 239 bp overlap
SUPT5H 4 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 57 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 178 bp overlap
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 73 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 93 bp overlap
SUPT6H 2 datasets
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 232 bp overlap
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 284 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 356 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 108 bp overlap
TP53 1 dataset
ChIP GM06170 GSE55727.TP53.GM06170 161 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 451 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 160 bp overlap
YY1 2 datasets
ChIP A-549 ENCSR000BPM.YY1.A-549 144 bp overlap
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 59 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 233 bp overlap
ZEB2 1 dataset
ChIP K562 ENCFF795CMH 451 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 336 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 148 bp overlap
ZFP36 2 datasets
ChIP A549 ENCFF505LUC 182 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 104 bp overlap
ZNF513 1 dataset
ChIP HEK293 ENCFF457TCC 377 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 368 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 198 bp overlap