chr7 : 2,815,206 2,815,593
387 bp 99 TFs 1 linked gene
This 387 bp open chromatin element is linked to GNA12 and is bound by 99 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GNA12 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:2,810,206 – 2,820,593
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 387 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 112 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 387 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 387 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 387 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 191 bp overlap
ATOH7 1 dataset
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 293 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 375 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 387 bp overlap
BHLHA15 1 dataset
Motif DE_12h DE_12h-BHLHA15_MA0607.2 10 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA0818.2 10 bp overlap
BHLHE23 1 dataset
Motif DE_12h DE_12h-BHLHE23_MA0817.2 10 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 259 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 236 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 67 bp overlap
ChIP NMC24335 GSE96775.BRD4.NMC24335 117 bp overlap
ChIP hESC GSE33281.BRD4.hESC 116 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 246 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 334 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 387 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 133 bp overlap
CTCF 17 datasets
ChIP H9 ENCFF152GTF 146 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 134 bp overlap
ChIP astrocyte ENCFF042YJV 345 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 201 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 179 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 281 bp overlap
ChIP chondrocyte ENCFF134ORZ 327 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 275 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 235 bp overlap
ChIP endodermal cell ENCFF471YCZ 380 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 246 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 158 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 167 bp overlap
ChIP osteocyte ENCFF929FPD 153 bp overlap
ChIP placenta ENCFF029PHY 387 bp overlap
ChIP smooth muscle cell ENCFF656FBT 311 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 205 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF274GAT 217 bp overlap
ChIP BLaER1 ENCFF335XTP 60 bp overlap
E2F4 1 dataset
ChIP K-562 ENCSR000EWL.E2F4.K-562 124 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 307 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 387 bp overlap
ESR1 1 dataset
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 179 bp overlap
FOSL2 3 datasets
ChIP HepG2 ENCFF548CXY 341 bp overlap
ChIP HepG2 ENCFF796NIA 257 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 340 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 118 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 223 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 190 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 267 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 270 bp overlap
HNF1B 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.HNF1B.PANC-1_HNF1B-OE 56 bp overlap
JMJD1C 1 dataset
ChIP NB4 GSE63484.JMJD1C.NB4 136 bp overlap
JUN 10 datasets
ChIP 786-O GSE86092.JUN.786-O 115 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 253 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 387 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 387 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 345 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 387 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 365 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 387 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 379 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 319 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 294 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 304 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 387 bp overlap
KLF5 2 datasets
ChIP HEK293 GSE88976.KLF5.HEK293 201 bp overlap
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 287 bp overlap
KMT2A 4 datasets
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 387 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 349 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 387 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 387 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 387 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 310 bp overlap
MAFK 3 datasets
ChIP H1 ENCFF854XWE 285 bp overlap
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 124 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 162 bp overlap
MAX 1 dataset
ChIP WTC11 ENCFF223QFY 387 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 50 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 251 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 239 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 187 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 306 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 385 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 227 bp overlap
NEUROG1 1 dataset
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
NFE2 6 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 303 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 193 bp overlap
ChIP K-562 ENCSR000FAF.NFE2.K-562 98 bp overlap
ChIP K562 ENCFF047YKA 340 bp overlap
ChIP K562 ENCFF163BSI 265 bp overlap
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 83 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 339 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 196 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 291 bp overlap
OLIG1 1 dataset
Motif DE_12h DE_12h-OLIG1_MA0826.1 10 bp overlap
OLIG2 1 dataset
Motif DE_12h DE_12h-OLIG2_MA0678.1 10 bp overlap
OLIG3 1 dataset
Motif DE_12h DE_12h-OLIG3_MA0827.1 10 bp overlap
POLR2A 4 datasets
ChIP GM23338 ENCFF450WCS 292 bp overlap
ChIP H1 ENCFF833NJP 198 bp overlap
ChIP H1 ENCFF833NJP 371 bp overlap
ChIP H54 ENCFF398BXN 157 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 387 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 236 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 387 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 337 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 240 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 102 bp overlap
RUNX1 1 dataset
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 127 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 218 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 104 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 81 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 314 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 357 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 377 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 263 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 330 bp overlap
SPI1 1 dataset
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 84 bp overlap
SUZ12 1 dataset
ChIP ProEs GSE59087.SUZ12.ProEs 63 bp overlap
TAF1 1 dataset
ChIP H1 ENCFF478SZO 263 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 193 bp overlap
TCF21 1 dataset
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0810.2 11 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 129 bp overlap
TRIM25 2 datasets
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 125 bp overlap
ChIP MDA-MB-231 GSE79588.TRIM25.MDA-MB-231 170 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 264 bp overlap
YY1 3 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 127 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 136 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 125 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 105 bp overlap
ZBTB33 4 datasets
ChIP HepG2 ENCFF778UKV 131 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 387 bp overlap
ChIP K562 ENCFF427SDV 387 bp overlap
ChIP K562 ENCFF875HLX 246 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 266 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 91 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 387 bp overlap
ZBTB7C 1 dataset
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
ZFHX2 2 datasets
ChIP HEK293 ENCFF167TUA 128 bp overlap
ChIP HEK293 ENCFF167TUA 198 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 305 bp overlap
ZNF263 7 datasets
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 175 bp overlap
ChIP HepG2 ENCFF626SSV 86 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 112 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 110 bp overlap
ChIP K562 ENCFF640RNA 153 bp overlap
ChIP K562 ENCFF650LPZ 122 bp overlap
ChIP WTC11 ENCFF893RTM 139 bp overlap
ZNF281 1 dataset
ChIP K-562 GSE121133.ZNF281.K-562 198 bp overlap
ZNF316 2 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 387 bp overlap
ChIP K562 ENCFF838QCD 344 bp overlap
ZNF534 2 datasets
ChIP HEK293T GSE78099.ZNF534.HEK293T 86 bp overlap
ChIP HEK293T GSE78099.ZNF534.HEK293T 139 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 322 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap