chr6 : 106,051,129 106,051,711
582 bp 124 TFs 0 linked genes
This 582 bp open chromatin element has no linked target genes and is bound by 124 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:106,046,129 – 106,056,711
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
124 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 507 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 134 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 184 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 297 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 323 bp overlap
BRD2 2 datasets
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 425 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 425 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 170 bp overlap
BRD4 1 dataset
ChIP HEK293T GSE39579.BRD4.HEK293T 242 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 268 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 381 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 230 bp overlap
EGR3 1 dataset
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
EGR4 1 dataset
Motif DE_12h DE_12h-EGR4_MA0733.2 11 bp overlap
ELF1 1 dataset
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_12h DE_12h-ELF4_MA0641.1 12 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 324 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 430 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FLI1 5 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 226 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 231 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 213 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 273 bp overlap
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 299 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 314 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 430 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 374 bp overlap
FOXA2 4 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 444 bp overlap
ChIP DE DE-FOXA2-1 361 bp overlap
ChIP DE DE-FOXA2-2 333 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 435 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 157 bp overlap
GABPA 1 dataset
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 342 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 276 bp overlap
HNF1B 2 datasets
ChIP H9 ERP004206.HNF1B.H9 218 bp overlap
ChIP foregut GSE117136.HNF1B.foregut 355 bp overlap
HNF4A 1 dataset
ChIP Caco-2_PROLIF GSE23436.HNF4A.Caco-2_PROLIF 164 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 422 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 360 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 393 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 349 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 208 bp overlap
KMT2B 1 dataset
ChIP AML GSE112074.KMT2B.AML 207 bp overlap
MEF2A 1 dataset
Motif DE_12h DE_12h-MEF2A_MA0052.5 10 bp overlap
MSC 1 dataset
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 211 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 322 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 186 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 572 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 489 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 133 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 582 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 494 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 474 bp overlap
ChIP hESC GSE18292.NANOG.hESC 161 bp overlap
NIPBL 3 datasets
ChIP WA09 GSE105028.NIPBL.WA09 303 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 376 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 186 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap
NR2F6 1 dataset
Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
Olig2 1 dataset
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 455 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 288 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PRDM14 1 dataset
ChIP hESC GSE22767.PRDM14.hESC 499 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 278 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
RAD21 2 datasets
ChIP WA09 GSE105028.RAD21.WA09 189 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 207 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 170 bp overlap
RNF2 2 datasets
ChIP WA09 GSE105028.RNF2.WA09 482 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 346 bp overlap
Rhox11 1 dataset
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SIX2 3 datasets
Motif DE_12h DE_12h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 243 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 206 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 377 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 344 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
ChIP BG03 GSE21614.SMAD3.BG03 220 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 160 bp overlap
SMARCA4 7 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 423 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 582 bp overlap
ChIP A-549_AG15686 GSE132290.SMARCA4.A-549_AG15686 336 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 375 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 304 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 469 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 302 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 323 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 384 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 501 bp overlap
SPI1 4 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 259 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 232 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 228 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 106 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 310 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 376 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 441 bp overlap
Tcf12 1 dataset
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 338 bp overlap
ZBTB1 1 dataset
ChIP Jurkat_ZBTB1-KO_cDNA GSE145783.ZBTB1.Jurkat_ZBTB1-KO_cDNA 158 bp overlap
ZBTB7A 2 datasets
Motif DE_12h DE_12h-ZBTB7A_MA0750.3 9 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 223 bp overlap
ZIC1 1 dataset
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
ZIC2 1 dataset
ChIP HCT-116_WT GSE127960.ZIC2.HCT-116_WT 289 bp overlap
ZIC4 1 dataset
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
ZIC5 5 datasets
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 459 bp overlap
ChIP HCT-116_WT-FL290 GSE127960.ZIC5.HCT-116_WT-FL290 188 bp overlap
ChIP HCT-116_sc1 GSE127960.ZIC5.HCT-116_sc1 223 bp overlap
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 384 bp overlap
ZNF143 1 dataset
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 315 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF184 3 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ChIP WTC11 ENCFF352POG 463 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 158 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 178 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF667 1 dataset
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
ZNF816 1 dataset
ChIP HEK293 GSE76494.ZNF816.HEK293 186 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap