chr6 : 72,626,097 72,626,496
399 bp 92 TFs 2 linked genes
This 399 bp open chromatin element is linked to KCNQ5-DT and KCNQ5 and is bound by 92 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
KCNQ5-DT 4.0 kb Proximal Proximity
KCNQ5 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:72,621,097 – 72,631,496
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AHR 1 dataset
ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 99 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 309 bp overlap
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 399 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 351 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 399 bp overlap
BACH2 1 dataset
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 262 bp overlap
BATF 2 datasets
ChIP GM12878 ENCFF954REE 214 bp overlap
ChIP OCI-Ly10 GSE56857.BATF.OCI-Ly10 289 bp overlap
BATF3 2 datasets
ChIP GM12878 GSE97661.BATF3.GM12878 242 bp overlap
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 377 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 271 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 327 bp overlap
BCL3 1 dataset
ChIP GM12878 ENCSR000BNQ.BCL3.GM12878 126 bp overlap
BCLAF1 1 dataset
ChIP GM12878 ENCFF306JRM 399 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF010ZUU 331 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 253 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 399 bp overlap
BRD4 3 datasets
ChIP GM15850_PA1_JQ1 GSE99402.BRD4.GM15850_PA1_JQ1 375 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 298 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 67 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 256 bp overlap
ChIP K562 ENCFF673OEZ 384 bp overlap
CBFB 2 datasets
ChIP GM12878 ENCFF056JUS 399 bp overlap
ChIP GM12878 ENCSR860UHK.CBFB.GM12878 179 bp overlap
CBX5 1 dataset
ChIP GM12878 ENCSR372GIN.CBX5.GM12878 201 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 396 bp overlap
ChIP GM12878 ENCFF249AMT 242 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 165 bp overlap
CREM 2 datasets
ChIP GM12878 ENCFF391UGE 361 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 336 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCFF681AJV 399 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 298 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP LCL GSE75503.EBF1.LCL 133 bp overlap
EED 1 dataset
ChIP GM12878 ENCFF266FYW 132 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 232 bp overlap
EP300 3 datasets
ChIP GM12878 ENCFF039QRE 351 bp overlap
ChIP GM12878 ENCSR000BHB.EP300.GM12878 174 bp overlap
ChIP GM12878 ENCSR000DZG.EP300.GM12878 158 bp overlap
ETV6 3 datasets
ChIP GM12878 ENCFF105ZMI 361 bp overlap
ChIP GM12878 GSE97661.ETV6.GM12878 395 bp overlap
ChIP GM12878 ENCSR626VUC.ETV6.GM12878 300 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 399 bp overlap
ChIP DE DE-FOXA2-2 399 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 399 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 282 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 107 bp overlap
GABPA 1 dataset
ChIP GM12878 ENCFF872TWR 349 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 399 bp overlap
ChIP DE DE-GATA4-2 399 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 399 bp overlap
ChIP DE DE-GATA6-2 399 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 245 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 312 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 398 bp overlap
ChIP K562 ENCFF744ALD 334 bp overlap
IKZF1 3 datasets
ChIP GM12878 ENCFF753XDO 371 bp overlap
ChIP GM12878 ENCFF824TGK 399 bp overlap
ChIP GM12878 ENCFF824TGK 291 bp overlap
IKZF2 5 datasets
ChIP GM12878 ENCFF238LYK 399 bp overlap
ChIP GM12878 ENCFF238LYK 290 bp overlap
ChIP GM12878 ENCFF918AID 399 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 390 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 379 bp overlap
IRF4 9 datasets
ChIP B-cell GSE142493.IRF4.B-cell 399 bp overlap
ChIP BC-3 GSE132777.IRF4.BC-3 222 bp overlap
ChIP GM12878 ENCFF769ZDL 118 bp overlap
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 383 bp overlap
ChIP KK-1 GSE94732.IRF4.KK-1 93 bp overlap
ChIP OCI-Ly10 GSE142493.IRF4.OCI-Ly10 397 bp overlap
ChIP OCI-Ly3 GSE142493.IRF4.OCI-Ly3 270 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 212 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 399 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 270 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 399 bp overlap
JUND 2 datasets
ChIP GM12878 ENCFF086GAB 285 bp overlap
ChIP GM12878 ENCSR000DYS.JUND.GM12878 154 bp overlap
KMT2A 1 dataset
ChIP SEM GSE83671.KMT2A.SEM 244 bp overlap
MAF 1 dataset
ChIP CD4_Th1 GSE72266.MAF.CD4_Th1 378 bp overlap
MAX 1 dataset
ChIP P493-6 GSE42262.MAX.P493-6 184 bp overlap
MED1 1 dataset
ChIP GM12878 GSE93080.MED1.GM12878 399 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 291 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 250 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 215 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 359 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 204 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 368 bp overlap
MTA3 2 datasets
ChIP GM12878 ENCFF681QPL 399 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 209 bp overlap
MYB 2 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 294 bp overlap
ChIP DU528 GSE94000.MYB.DU528 283 bp overlap
NBN 2 datasets
ChIP GM12878 ENCFF213ZNN 399 bp overlap
ChIP GM12878 ENCSR278SQL.NBN.GM12878 399 bp overlap
NFATC3 3 datasets
ChIP GM12878 ENCFF340KVJ 399 bp overlap
ChIP GM12878 ENCFF340KVJ 274 bp overlap
ChIP GM12878 ENCSR437GBJ.NFATC3.GM12878 399 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR000FCC.NFE2.K-562 130 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 167 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 399 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 249 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCFF482PUW 251 bp overlap
ChIP GM12878 ENCFF503GOV 305 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 317 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 188 bp overlap
PBX3 1 dataset
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 92 bp overlap
PKNOX1 2 datasets
ChIP GM12878 ENCFF589FCY 263 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 175 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF263VRI 399 bp overlap
ChIP GM12878 ENCFF412KAE 375 bp overlap
POU2F2 1 dataset
ChIP GM12878 ENCFF207RKY 321 bp overlap
RAD21 4 datasets
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 201 bp overlap
ChIP lymphoblast GSE155324.RAD21.lymphoblast 301 bp overlap
ChIP lymphoblast_mut GSE155324.RAD21.lymphoblast_mut 350 bp overlap
RBPJ 2 datasets
ChIP LCL GSE75503.RBPJ.LCL 202 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 381 bp overlap
RCOR1 2 datasets
ChIP GM12878 ENCFF982CRX 380 bp overlap
ChIP GM12878 ENCFF982CRX 268 bp overlap
RELA 1 dataset
ChIP GM12878 ENCSR000EAG.RELA.GM12878 172 bp overlap
RELB 2 datasets
ChIP GM12878 ENCFF217ADF 399 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 399 bp overlap
REST 1 dataset
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 142 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 252 bp overlap
SKIL 3 datasets
ChIP GM12878 ENCFF171OVM 399 bp overlap
ChIP GM12878 ENCFF171OVM 248 bp overlap
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 399 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap
SMARCA5 1 dataset
ChIP GM12878 ENCFF327LDR 182 bp overlap
SMC3 2 datasets
ChIP GM12878 ENCFF085RLZ 271 bp overlap
ChIP GM12878 ENCFF085RLZ 119 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 123 bp overlap
SP1 1 dataset
ChIP GM12878 ENCSR000BHK.SP1.GM12878 139 bp overlap
SPI1 20 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 248 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 357 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 203 bp overlap
ChIP GM12878 ENCFF134LCP 258 bp overlap
ChIP GM12891 ENCFF563IUT 204 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 300 bp overlap
ChIP HL-60 ENCFF645GBT 149 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 266 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 165 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 170 bp overlap
ChIP K562 ENCFF410ORC 205 bp overlap
ChIP KG-1 GSE128834.SPI1.KG-1 235 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 175 bp overlap
ChIP OCI-Ly3 GSE56857.SPI1.OCI-Ly3 186 bp overlap
ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 216 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 91 bp overlap
ChIP primary-B-cell_donorA GSE128834.SPI1.primary-B-cell_donorA 213 bp overlap
ChIP primary-monocyte_donorA_ncMO GSE128834.SPI1.primary-monocyte_donorA_ncMO 114 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 136 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 130 bp overlap
SPIB 3 datasets
ChIP OCI-Ly10 GSE56857.SPIB.OCI-Ly10 235 bp overlap
ChIP OCI-Ly3 GSE56857.SPIB.OCI-Ly3 399 bp overlap
ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 291 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 395 bp overlap
STAT5A 2 datasets
ChIP GM12878 ENCSR000BQZ.STAT5A.GM12878 174 bp overlap
ChIP K-562 ENCSR000BRR.STAT5A.K-562 128 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 184 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 198 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 207 bp overlap
TBL1XR1 1 dataset
ChIP GM12878 ENCFF409FTM 381 bp overlap
TBP 1 dataset
ChIP GM12878 ENCFF571OXR 330 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 399 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 399 bp overlap
TCF12 2 datasets
ChIP GM12878 ENCFF506WWB 257 bp overlap
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 290 bp overlap
TCF3 1 dataset
ChIP GM12878 ENCSR000BQT.TCF3.GM12878 201 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 131 bp overlap
TCF7 2 datasets
ChIP GM12878 ENCFF749DPM 278 bp overlap
ChIP GM12878 ENCSR501DKS.TCF7.GM12878 293 bp overlap
TRIM22 2 datasets
ChIP GM12878 ENCFF919OMX 399 bp overlap
ChIP GM12878 ENCSR835XKS.TRIM22.GM12878 399 bp overlap
YY1 1 dataset
ChIP GM12878 ENCFF908JTL 340 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 162 bp overlap
ZBTB4 1 dataset
ChIP GM12878 ENCFF811BTD 72 bp overlap
ZMYM3 1 dataset
ChIP GM12878 GSE97661.ZMYM3.GM12878 177 bp overlap
ZNF217 1 dataset
ChIP GM12878 ENCFF978IGL 399 bp overlap