chr5 : 173,245,361 173,246,026
665 bp 109 TFs 4 linked genes
This 665 bp open chromatin element is linked to 4 target genes and is bound by 109 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
STC2 82.7 kb Distal Multiome
CREBRF 189.4 kb Distal Multiome
ATP6V0E1 261.9 kb Distal Multiome
RPL26L1 286.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:173,240,361 – 173,251,026
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
BACH2 1 dataset
Motif DE_72h DE_72h-BACH2_MA1470.2 19 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 665 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 665 bp overlap
BRD1 2 datasets
ChIP HUES-64 GSE104059.BRD1.HUES-64 458 bp overlap
ChIP HUES-64 GSE104059.BRD1.HUES-64 151 bp overlap
BRD4 2 datasets
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 378 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 266 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 329 bp overlap
ChIP K562 ENCFF673OEZ 411 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 204 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 665 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 225 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 553 bp overlap
CUX1 1 dataset
Motif DE_72h DE_72h-CUX1_MA0754.3 9 bp overlap
CUX2 1 dataset
Motif DE_72h DE_72h-CUX2_MA0755.2 9 bp overlap
EED 2 datasets
ChIP ProEs GSE59087.EED.ProEs 266 bp overlap
ChIP ProEs GSE59087.EED.ProEs 247 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 564 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 305 bp overlap
ESR2 1 dataset
Motif DE_72h DE_72h-ESR2_MA0258.2 15 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 574 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D14 GSE129986.ETS1.cardiomyocyte_D14 181 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 198 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 201 bp overlap
ETV2 1 dataset
Motif DE_72h DE_72h-ETV2_MA0762.2 9 bp overlap
EZH2 31 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 506 bp overlap
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 249 bp overlap
ChIP GM12878 ENCFF635TDF 291 bp overlap
ChIP GM23338 ENCFF613YON 665 bp overlap
ChIP GM23338 ENCFF886DXX 397 bp overlap
ChIP GM23338 ENCFF886DXX 343 bp overlap
ChIP H1 ENCFF232NZA 665 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 665 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 665 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 665 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 665 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 665 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 620 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 654 bp overlap
ChIP astrocyte ENCFF365JTP 665 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 208 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 665 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 665 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 338 bp overlap
ChIP fibroblast of lung ENCFF479BAW 527 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 665 bp overlap
ChIP hESC GSE113817.EZH2.hESC 545 bp overlap
ChIP hepatocyte ENCFF118DKH 190 bp overlap
ChIP hepatocyte ENCFF118DKH 161 bp overlap
ChIP hepatocyte ENCFF552DZB 665 bp overlap
ChIP keratinocyte ENCFF070STK 251 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 369 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 429 bp overlap
ChIP neural cell ENCFF610EPB 378 bp overlap
ChIP neural progenitor cell ENCFF018MKA 665 bp overlap
ChIP neural progenitor cell ENCFF472NFV 665 bp overlap
EZH2_phosphoT487 4 datasets
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 151 bp overlap
ChIP GM23248 ENCSR096KPA.EZH2_phosphoT487.GM23248 260 bp overlap
ChIP GM23338 ENCSR591DTH.EZH2_phosphoT487.GM23338 527 bp overlap
ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 605 bp overlap
Erg 1 dataset
Motif DE_72h DE_72h-Erg_MA0474.4 10 bp overlap
FERD3L 1 dataset
Motif DE_72h DE_72h-FERD3L_MA1485.1 14 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 134 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 264 bp overlap
GABPA 1 dataset
Motif DE_72h DE_72h-GABPA_MA0062.4 10 bp overlap
GATA1 3 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 192 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 259 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 126 bp overlap
GATA2 4 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 196 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 211 bp overlap
ChIP hiPSC_SLC9ebs GSE107639.GATA2.hiPSC_SLC9ebs 248 bp overlap
GATA4 14 datasets
ChIP DE DE-GATA4-1 522 bp overlap
ChIP DE DE-GATA4-2 665 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP G296S GSE85628.GATA4.G296S 405 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 405 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 394 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 304 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 305 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 470 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 409 bp overlap
ChIP foregut GSE117136.GATA4.foregut 583 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 596 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 556 bp overlap
GATA5 1 dataset
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 440 bp overlap
ChIP DE DE-GATA6-2 665 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 620 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 588 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 665 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 665 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 665 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 665 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 600 bp overlap
ChIP foregut GSE117136.GATA6.foregut 555 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 552 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 562 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 510 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 468 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
Gata3 1 dataset
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 167 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 285 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 230 bp overlap
IKZF1 1 dataset
Motif DE_72h DE_72h-IKZF1_MA1508.2 8 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 622 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 215 bp overlap
IRF2 1 dataset
Motif DE_72h DE_72h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 207 bp overlap
JARID2 5 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 665 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 617 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 665 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 665 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 665 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 438 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 220 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 178 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 285 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 173 bp overlap
LIN54 1 dataset
Motif DE_72h DE_72h-LIN54_MA0619.2 7 bp overlap
MED1 2 datasets
ChIP G296S GSE85628.MED1.G296S 665 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 665 bp overlap
MEF2A 1 dataset
Motif DE_72h DE_72h-MEF2A_MA0052.5 10 bp overlap
MEF2C 1 dataset
Motif DE_72h DE_72h-MEF2C_MA0497.2 11 bp overlap
MEIS1 2 datasets
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_72h DE_72h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_72h DE_72h-MEIS3_MA0775.2 7 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 172 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 413 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 212 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 246 bp overlap
NRF1 3 datasets
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 111 bp overlap
ChIP K562 ENCFF689EWI 557 bp overlap
ChIP K562 ENCFF689EWI 409 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 342 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 334 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 311 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 286 bp overlap
ONECUT1 2 datasets
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 170 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 558 bp overlap
ONECUT3 1 dataset
Motif DE_72h DE_72h-ONECUT3_MA0757.2 12 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 665 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 427 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 298 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 288 bp overlap
POLR2A 4 datasets
ChIP neural cell ENCFF604SPB 385 bp overlap
ChIP neural cell ENCFF604SPB 121 bp overlap
ChIP spleen ENCFF446ZGT 224 bp overlap
ChIP spleen ENCFF706IUS 283 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 150 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 253 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 214 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 288 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 555 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 182 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 209 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 142 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 202 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 191 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 665 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 599 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 218 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 204 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 665 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 596 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 95 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 660 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 585 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 541 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 330 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 532 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 425 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 119 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 514 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 519 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 547 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 164 bp overlap
SPI1 1 dataset
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 109 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 306 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 133 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 182 bp overlap
SUZ12 14 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 364 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 665 bp overlap
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 297 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 343 bp overlap
ChIP K-562 ENCSR412CTM.SUZ12.K-562 184 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 290 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 665 bp overlap
ChIP NT2/D1 ENCFF574SXS 292 bp overlap
ChIP ProEs GSE59087.SUZ12.ProEs 162 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 665 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 496 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 88 bp overlap
ChIP hMSC GSE125166.SUZ12.hMSC 263 bp overlap
Spz1 1 dataset
Motif DE_72h DE_72h-Spz1_MA0111.1 11 bp overlap
TAL1 2 datasets
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 168 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 201 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 665 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 665 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 478 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 102 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 356 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 537 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 180 bp overlap
TEAD1 1 dataset
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
TEAD3 1 dataset
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 99 bp overlap
THRB 1 dataset
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 211 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 163 bp overlap
ChIP AF22 GSE84259.TRIM28.AF22 376 bp overlap
TRPS1 1 dataset
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 178 bp overlap
ZBTB14 1 dataset
Motif DE_72h DE_72h-ZBTB14_MA1650.2 8 bp overlap
ZNF140 1 dataset
Motif DE_72h DE_72h-ZNF140_MA1589.2 19 bp overlap
ZNF557 1 dataset
ChIP HEK293T GSE78099.ZNF557.HEK293T 261 bp overlap