chr5 : 108,239,085 108,240,084
999 bp 145 TFs 0 linked genes
This 999 bp open chromatin element has no linked target genes and is bound by 145 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:108,234,085 – 108,245,084
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
145 transcription factors
Source
Cell type
AR 7 datasets
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 187 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.AR.LNCaP_SHFOXA1_R1881 116 bp overlap
ChIP MDA-MB-453_R1881_SICTR GSE70161.AR.MDA-MB-453_R1881_SICTR 146 bp overlap
ChIP MDA-MB-453_R1881_SIPIAS1 GSE70161.AR.MDA-MB-453_R1881_SIPIAS1 178 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 201 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 181 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 226 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 131 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 3 datasets
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 413 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 596 bp overlap
ChIP SUM149PT_R_JQ1 GSE131097.BRD2.SUM149PT_R_JQ1 198 bp overlap
BRD4 2 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 432 bp overlap
CDK8 1 dataset
ChIP HCT-116_NOMO GSE38258.CDK8.HCT-116_NOMO 377 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 182 bp overlap
CTCF 27 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1930.2 33 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 143 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 297 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 264 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 164 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 222 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 248 bp overlap
ChIP HCT116 ENCFF209YMI 285 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 326 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 326 bp overlap
ChIP HeLa-Kyoto GSE102884.CTCF.HeLa-Kyoto 296 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 170 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 231 bp overlap
ChIP K562 ENCFF111MGE 245 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 307 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 270 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 98 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 119 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 411 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 167 bp overlap
E2F1 1 dataset
ChIP HMEC-1 GSE62425.E2F1.HMEC-1 311 bp overlap
E2F6 2 datasets
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 140 bp overlap
E2F8 1 dataset
Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif ES_0h ES_0h-ERFHOXB13_MA1937.2 13 bp overlap
ESR1 5 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 234 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 238 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 392 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 311 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 272 bp overlap
ESR2 1 dataset
Motif DE_12h DE_12h-ESR2_MA0258.2 15 bp overlap
ESRRA 4 datasets
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 417 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 635 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 887 bp overlap
ESRRB 1 dataset
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
ETV2::DRGX 2 datasets
Motif DE_12h DE_12h-ETV2DRGX_MA1940.2 12 bp overlap
Motif ES_0h ES_0h-ETV2DRGX_MA1940.2 12 bp overlap
ETV2::HOXB13 2 datasets
Motif DE_12h DE_12h-ETV2HOXB13_MA1943.2 13 bp overlap
Motif ES_0h ES_0h-ETV2HOXB13_MA1943.2 13 bp overlap
ETV5::DRGX 2 datasets
Motif DE_12h DE_12h-ETV5DRGX_MA1944.2 12 bp overlap
Motif ES_0h ES_0h-ETV5DRGX_MA1944.2 12 bp overlap
ETV5::HOXA2 2 datasets
Motif DE_12h DE_12h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap
Elf5 1 dataset
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Esrrg 2 datasets
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FLI1::DRGX 2 datasets
Motif DE_12h DE_12h-FLI1DRGX_MA1949.2 14 bp overlap
Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOXA1 1 dataset
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 152 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 103 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 416 bp overlap
HOXB2::ELK1 2 datasets
Motif DE_12h DE_12h-HOXB2ELK1_MA1957.1 14 bp overlap
Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap
IKZF2 5 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
IRF6 1 dataset
Motif DE_12h DE_12h-IRF6_MA1509.1 9 bp overlap
IRF7 1 dataset
Motif DE_12h DE_12h-IRF7_MA0772.2 13 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP HCT116 ENCFF748ZQX 397 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 139 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 582 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 279 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MITF 1 dataset
Motif DE_12h DE_12h-MITF_MA0620.4 10 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYC 4 datasets
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 182 bp overlap
ChIP NCI-H128 GSE41105.MYC.NCI-H128 155 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 342 bp overlap
ChIP P493-6_Dpy30-shRNA GSE101853.MYC.P493-6_Dpy30-shRNA 62 bp overlap
MYCN 2 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 251 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 230 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 189 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 260 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 189 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFIB 1 dataset
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
NFIC 3 datasets
Motif DE_12h DE_12h-NFIC_MA1527.2 15 bp overlap
ChIP Ishikawa ENCFF029AAD 381 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 144 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA1528.2 14 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NR2F1 1 dataset
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
NR2F2 1 dataset
Motif DE_12h DE_12h-NR2F2_MA1111.2 7 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHG.NR3C1.A-549 120 bp overlap
NR5A1 1 dataset
Motif DE_12h DE_12h-NR5A1_MA1540.3 12 bp overlap
Nfe2l2 1 dataset
Motif DE_12h DE_12h-Nfe2l2_MA0150.3 11 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 420 bp overlap
ChIP AB32 GSE31129.PGR.AB32 304 bp overlap
Ppara 1 dataset
Motif DE_12h DE_12h-Ppara_MA2338.1 7 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
RARA::RXRA 2 datasets
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RBPJ 1 dataset
ChIP HCC1599 GSE116871.RBPJ.HCC1599 255 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 242 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 248 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0857.1 16 bp overlap
Rarg 1 dataset
Motif DE_12h DE_12h-Rarg_MA0859.2 15 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCFF513YVP 68 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 97 bp overlap
SMAD3 1 dataset
Motif ES_0h ES_0h-SMAD3_MA0795.1 10 bp overlap
SMAD5 1 dataset
Motif ES_0h ES_0h-SMAD5_MA1557.1 10 bp overlap
SMC3 4 datasets
ChIP HeLa GSE126990.SMC3.HeLa 268 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 268 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 268 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 154 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
STAT3 2 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 165 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 236 bp overlap
Smad4 1 dataset
Motif ES_0h ES_0h-Smad4_MA1153.2 7 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBP 2 datasets
Motif DE_12h DE_12h-TBP_MA0108.3 7 bp overlap
Motif ES_0h ES_0h-TBP_MA0108.3 7 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 123 bp overlap
TCF7L2 3 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 291 bp overlap
ChIP HCT116 ENCFF038POZ 371 bp overlap
ChIP LNCaP GSE51621.TCF7L2.LNCaP 211 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
TFAP2A 1 dataset
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 1 dataset
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFE3 1 dataset
Motif DE_12h DE_12h-TFE3_MA0831.3 10 bp overlap
TFEB 1 dataset
Motif DE_12h DE_12h-TFEB_MA0692.2 8 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
TP53 1 dataset
ChIP SaOS-2 GSE51268.TP53.SaOS-2 281 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 197 bp overlap
TWIST1 2 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 200 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 200 bp overlap
Tfcp2l1 2 datasets
Motif DE_12h DE_12h-Tfcp2l1_MA0145.2 14 bp overlap
Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
USF1 9 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 127 bp overlap
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 241 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 171 bp overlap
ChIP HCT116 ENCFF330PYP 365 bp overlap
ChIP Ishikawa ENCFF728IEG 261 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 150 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 155 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 210 bp overlap
USF2 2 datasets
ChIP WA01 ENCSR000ECD.USF2.WA01 137 bp overlap
ChIP WTC11 ENCFF139JAW 417 bp overlap
XBP1 1 dataset
Motif ES_0h ES_0h-XBP1_MA0844.2 11 bp overlap
YY1AP1 1 dataset
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 152 bp overlap
ZBTB24 2 datasets
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 322 bp overlap
ZBTB6 2 datasets
Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap
Motif ES_0h ES_0h-ZBTB6_MA1581.2 9 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 158 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 497 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF398 1 dataset
ChIP BG01V GSE133630.ZNF398.BG01V 158 bp overlap
ZNF417 2 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF563 1 dataset
ChIP HEK293 GSE76494.ZNF563.HEK293 273 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
ChIP HEK293 GSE76494.ZNF667.HEK293 273 bp overlap
ZSCAN21 3 datasets
Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap
Motif DE_12h DE_12h-ZSCAN21_MA2336.1 7 bp overlap
Motif ES_0h ES_0h-ZSCAN21_MA2336.1 7 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap