chr2 : 61,004,935 – 61,005,062
127 bp 117 TFs 0 linked genes
This 127 bp open chromatin element has no linked target genes and is bound by 117 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:60,999,935 – 61,010,062
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
117 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP K562 ENCFF583EEH 96 bp overlap
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 127 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 127 bp overlap
ChIP K562 ENCFF938UXQ 127 bp overlap
ARID2 1 dataset
ChIP K562 ENCFF099BVK 98 bp overlap
ASH1L 1 dataset
ChIP K562 ENCFF808EMX 79 bp overlap
ATF3 4 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 127 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 127 bp overlap
ChIP K562 ENCFF604FPV 127 bp overlap
ChIP K562 ENCFF921JQW 127 bp overlap
Atf3 1 dataset
Motif DE_12h DE_12h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_12h DE_12h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_12h DE_12h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_12h DE_12h-BATF3_MA0835.3 7 bp overlap
BATF::JUN 1 dataset
Motif DE_12h DE_12h-BATFJUN_MA0462.3 7 bp overlap
BCL11A 1 dataset
ChIP HEK293 ENCFF294OHB 127 bp overlap
BCL11B 1 dataset
ChIP HEK293 ENCFF859UHP 123 bp overlap
BCOR 1 dataset
ChIP K562 ENCFF343XWA 127 bp overlap
BHLHE40 1 dataset
ChIP IMR-90 ENCFF312JYK 127 bp overlap
BNC2 1 dataset
Motif DE_12h DE_12h-BNC2_MA1928.2 7 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 87 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 116 bp overlap
BRD4 5 datasets
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 57 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 90 bp overlap
ChIP SW480 GSE110473.BRD4.SW480 127 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 96 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 83 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 127 bp overlap
CREM 1 dataset
ChIP K562 ENCFF180STA 127 bp overlap
CSDE1 1 dataset
ChIP K562 ENCFF209YQQ 52 bp overlap
CTCF 5 datasets
ChIP 22Rv1 ENCFF466OXN 51 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 127 bp overlap
ChIP A549 ENCFF669BWC 113 bp overlap
ChIP HEK293 ENCFF821TIC 61 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 127 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 102 bp overlap
Crx 1 dataset
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
DPF2 3 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 127 bp overlap
ChIP K562 ENCFF739JDE 127 bp overlap
ChIP K562 ENCFF775HUO 127 bp overlap
E2F1 2 datasets
ChIP MCF-7 ENCFF692OYJ 127 bp overlap
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 104 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 127 bp overlap
EGR1 10 datasets
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 127 bp overlap
ChIP HCT116 ENCFF456NPQ 127 bp overlap
ChIP Ishikawa ENCFF550FKT 127 bp overlap
ChIP K-562 ENCSR211LTF.EGR1.K-562 127 bp overlap
ChIP K-562 ENCSR024CNP.EGR1.K-562 127 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 122 bp overlap
ChIP K562 ENCFF006PJY 88 bp overlap
ChIP K562 ENCFF113OPQ 127 bp overlap
ChIP K562 ENCFF895KGN 127 bp overlap
ChIP MCF-7 ENCFF679ZBN 127 bp overlap
ESR1 13 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 124 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 127 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 116 bp overlap
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 127 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 127 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 127 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 127 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 127 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 127 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 127 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 127 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 127 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 127 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 103 bp overlap
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 117 bp overlap
ChIP MCF-7 ENCFF282FWZ 127 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 127 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA0099.4 9 bp overlap
FOS::JUNB 1 dataset
Motif DE_12h DE_12h-FOSJUNB_MA1134.2 9 bp overlap
FOS::JUND 1 dataset
Motif DE_12h DE_12h-FOSJUND_MA1141.2 9 bp overlap
FOSB::JUNB 1 dataset
Motif DE_12h DE_12h-FOSBJUNB_MA1135.2 9 bp overlap
FOSL1 7 datasets
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 127 bp overlap
ChIP HCT116 ENCFF540ZXN 127 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 127 bp overlap
ChIP K-562 ENCSR000BMV.FOSL1.K-562 127 bp overlap
ChIP K562 ENCFF455MKD 127 bp overlap
ChIP K562 ENCFF728OTE 127 bp overlap
FOSL1::JUN 1 dataset
Motif DE_12h DE_12h-FOSL1JUN_MA1128.2 9 bp overlap
FOSL1::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL1JUNB_MA1137.2 9 bp overlap
FOSL1::JUND 1 dataset
Motif DE_12h DE_12h-FOSL1JUND_MA1142.2 8 bp overlap
FOSL2 7 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 127 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 127 bp overlap
ChIP A549 ENCFF195CES 127 bp overlap
ChIP A549 ENCFF651PDH 127 bp overlap
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 92 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 127 bp overlap
FOSL2::JUN 1 dataset
Motif DE_12h DE_12h-FOSL2JUN_MA1130.2 9 bp overlap
FOSL2::JUNB 1 dataset
Motif DE_12h DE_12h-FOSL2JUNB_MA1138.2 9 bp overlap
FOSL2::JUND 1 dataset
Motif DE_12h DE_12h-FOSL2JUND_MA1144.2 9 bp overlap
FOXA1 1 dataset
ChIP 22Rv1_r261g_CST GSE123618.FOXA1.22Rv1_r261g_CST 109 bp overlap
FOXA2 1 dataset
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 111 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 127 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 127 bp overlap
GLIS2 4 datasets
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 127 bp overlap
ChIP HCT-116_DMSO GSE125927.GLIS2.HCT-116_DMSO 111 bp overlap
ChIP HEK293 ENCFF446EIF 127 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 107 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 127 bp overlap
GSC 1 dataset
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
HDAC1 2 datasets
ChIP K562 ENCFF928TKZ 121 bp overlap
ChIP K562 ENCFF968WBH 127 bp overlap
HIC1 2 datasets
ChIP HEK293 ENCFF252CFL 127 bp overlap
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 127 bp overlap
JDP2 1 dataset
Motif DE_12h DE_12h-JDP2_MA0655.1 9 bp overlap
JUN 11 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 127 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 127 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 127 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 127 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 127 bp overlap
ChIP K-562 ENCSR000EZT.JUN.K-562 124 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 92 bp overlap
ChIP MCF-7_DMSO GSE157385.JUN.MCF-7_DMSO 127 bp overlap
ChIP MCF-7_TamR GSE128445.JUN.MCF-7_TamR 127 bp overlap
ChIP MCF-7_TamR_BD610326 GSE128445.JUN.MCF-7_TamR_BD610326 127 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 127 bp overlap
JUN::JUNB 1 dataset
Motif DE_12h DE_12h-JUNJUNB_MA1132.2 8 bp overlap
JUNB 5 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 127 bp overlap
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
ChIP MCF-7_DMSO GSE157218.JUNB.MCF-7_DMSO 127 bp overlap
ChIP MCF-7_abemaciclib GSE157218.JUNB.MCF-7_abemaciclib 127 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 90 bp overlap
JUND 9 datasets
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 102 bp overlap
ChIP HCT116 ENCFF748ZQX 127 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 127 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 120 bp overlap
ChIP K562 ENCFF336RCR 127 bp overlap
ChIP K562 ENCFF830LVJ 127 bp overlap
ChIP MCF-7 ENCFF450KFZ 127 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 82 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KLF16 2 datasets
ChIP HEK293 ENCFF558HSJ 127 bp overlap
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 127 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 127 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 127 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 74 bp overlap
KLF9 2 datasets
ChIP HEK293 ENCFF588INF 127 bp overlap
ChIP MCF-7 ENCFF618FCM 127 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 127 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 127 bp overlap
KMT2B 2 datasets
ChIP HEK293T_C-term GSE90762.KMT2B.HEK293T_C-term 87 bp overlap
ChIP HEK293T_C-term_C49 GSE90762.KMT2B.HEK293T_C-term_C49 127 bp overlap
KMT2B-D 1 dataset
ChIP SW480 GSE115985.KMT2B-D.SW480 119 bp overlap
MAX 2 datasets
ChIP HCT-116 ENCSR000BSH.MAX.HCT-116 90 bp overlap
ChIP HCT116 ENCFF810LEN 127 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 127 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 127 bp overlap
MEF2A 1 dataset
ChIP K562 ENCFF903PRO 105 bp overlap
MLLT1 1 dataset
ChIP K562 ENCFF074XRJ 89 bp overlap
MNT 1 dataset
ChIP K562 ENCFF450LDL 127 bp overlap
NFE2 1 dataset
Motif DE_12h DE_12h-NFE2_MA0841.2 10 bp overlap
NFRKB 1 dataset
ChIP K562 ENCFF221WAF 125 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 92 bp overlap
NKRF 1 dataset
ChIP K562 ENCFF815TQL 102 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 127 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 127 bp overlap
OTX1 1 dataset
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
OTX2 1 dataset
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
PHF8 1 dataset
ChIP A549 ENCFF815XUD 127 bp overlap
PITX1 1 dataset
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
POLR2A 3 datasets
ChIP HeLa-S3 ENCFF224LWS 127 bp overlap
ChIP K562 ENCFF836GHX 127 bp overlap
ChIP body of pancreas ENCFF501FEC 127 bp overlap
POLR2B 1 dataset
ChIP K562 ENCFF513ENO 95 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 127 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 127 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 54 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 127 bp overlap
RAD21 1 dataset
ChIP MCF-7 ENCFF694KOM 127 bp overlap
RELA 2 datasets
ChIP Detroit-562_Poly-I GSE91018.RELA.Detroit-562_Poly-I 127 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 127 bp overlap
RHOXF1 1 dataset
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 61 bp overlap
SIN3A 1 dataset
ChIP A549 ENCFF752ATT 127 bp overlap
SMARCA4 4 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 61 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 127 bp overlap
ChIP K562 ENCFF316MCJ 127 bp overlap
ChIP K562 ENCFF506JCB 97 bp overlap
SMARCC2 1 dataset
ChIP K562 ENCFF368GSR 127 bp overlap
SMARCD3 1 dataset
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 71 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 127 bp overlap
ChIP K562 ENCFF690CFF 127 bp overlap
SP1 2 datasets
ChIP HCT-116 ENCSR000BSF.SP1.HCT-116 96 bp overlap
ChIP HCT116 ENCFF800LBN 127 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 55 bp overlap
SREBF1 4 datasets
ChIP A549 ENCFF955FQW 127 bp overlap
ChIP KYSE-150 GSE143803.SREBF1.KYSE-150 127 bp overlap
ChIP MCF-7 ENCFF254QOR 127 bp overlap
ChIP TE-5 GSE143803.SREBF1.TE-5 89 bp overlap
SUPT5H 2 datasets
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 127 bp overlap
ChIP HeLa GSE125534.SUPT5H.HeLa 89 bp overlap
TRIM25 1 dataset
ChIP K562 ENCFF376TLP 110 bp overlap
USF1 1 dataset
ChIP K562 ENCFF633EZB 127 bp overlap
YY1 3 datasets
ChIP HEK293 ENCFF734SBY 101 bp overlap
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 115 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 127 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 127 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 127 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 127 bp overlap
ZC3H11A 1 dataset
ChIP A549 ENCFF640AQE 127 bp overlap
ZC3H8 1 dataset
ChIP K562 ENCFF495URH 99 bp overlap
ZEB1 1 dataset
ChIP PDAC GSE64557.ZEB1.PDAC 127 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 127 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 127 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 126 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 127 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 127 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 127 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 127 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 127 bp overlap
ZSCAN29 2 datasets
ChIP K562 ENCFF797SOU 127 bp overlap
ChIP K562 ENCFF842XOY 98 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 124 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 127 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
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