chrX : 44,343,432 44,343,787
355 bp 96 TFs 1 linked gene
This 355 bp open chromatin element is linked to EFHC2 and is bound by 96 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
EFHC2 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:44,338,432 – 44,348,787
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
96 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 355 bp overlap
ATF1 1 dataset
ChIP HCT-116 GSE130477.ATF1.HCT-116 355 bp overlap
BCOR 2 datasets
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 282 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 282 bp overlap
BRD2 5 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 355 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 355 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD2.K-562_iBET-BD2-IFNG 208 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 355 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 164 bp overlap
BRD3 5 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 355 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 355 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 334 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 314 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD3.K-562_iBET-IFNG 311 bp overlap
BRD4 17 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 237 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 355 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 236 bp overlap
ChIP K-562 GSE140325.BRD4.K-562 166 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 355 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 355 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 190 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 355 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 355 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 355 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 355 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 350 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 232 bp overlap
ChIP SEM GSE83671.BRD4.SEM 187 bp overlap
ChIP hESC GSE33281.BRD4.hESC 91 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 242 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 188 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 288 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 271 bp overlap
CDK9 2 datasets
ChIP MM1-S_DMSO GSE42161.CDK9.MM1-S_DMSO 230 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 291 bp overlap
CREB1 3 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 131 bp overlap
ChIP K-562 ENCSR000BSO.CREB1.K-562 120 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 136 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 160 bp overlap
ChIP K562 ENCFF180STA 246 bp overlap
CTCF 1 dataset
ChIP MM1-S GSE43743.CTCF.MM1-S 236 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 316 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 133 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 114 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHRB GSE40343.E2F7.IMR-90_SENES_SHRB 129 bp overlap
ERG 4 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 267 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 305 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 182 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 355 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 302 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 236 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 220 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 325 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 159 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 61 bp overlap
FOXJ2 2 datasets
ChIP K-562 ENCSR847LBF.FOXJ2.K-562 220 bp overlap
ChIP K562 ENCFF457GZC 355 bp overlap
FOXJ3 1 dataset
ChIP K562 ENCFF605HNH 295 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 342 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 355 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 219 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 269 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 355 bp overlap
HNRNPK 2 datasets
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 206 bp overlap
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 206 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 135 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 290 bp overlap
KDM1A 3 datasets
ChIP K562 ENCFF128TYE 136 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 55 bp overlap
ChIP SET-2_GSK GSE121424.KDM1A.SET-2_GSK 165 bp overlap
KDM5B 2 datasets
ChIP K-562 ENCSR000AQA.KDM5B.K-562 154 bp overlap
ChIP T-47D GSE46055.KDM5B.T-47D 273 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 167 bp overlap
KMT2A 2 datasets
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 355 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 355 bp overlap
MAX 3 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 159 bp overlap
ChIP K562 ENCFF524IJO 355 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 173 bp overlap
MAZ 3 datasets
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 147 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 302 bp overlap
ChIP K562 ENCFF333ZIV 303 bp overlap
MED1 3 datasets
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 124 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 222 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 177 bp overlap
MIER1 1 dataset
ChIP K-562 ENCSR426MDV.MIER1.K-562 102 bp overlap
MLLT3 1 dataset
ChIP HSPC_MLLT3-virus GSE111482.MLLT3.HSPC_MLLT3-virus 355 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 187 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 193 bp overlap
MYB 1 dataset
ChIP MOLT-3 GSE59657.MYB.MOLT-3 250 bp overlap
MYC 3 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 220 bp overlap
ChIP BE2C_SHWDR5 GSE70098.MYC.BE2C_SHWDR5 184 bp overlap
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 207 bp overlap
MYCN 1 dataset
ChIP Kelly GSE94782.MYCN.Kelly 303 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 309 bp overlap
NANOG 1 dataset
ChIP WA01 ENCSR000BMT.NANOG.WA01 173 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 289 bp overlap
NELFA 2 datasets
ChIP K-562_HS GSE112379.NELFA.K-562_HS 291 bp overlap
ChIP K-562_NHS GSE112379.NELFA.K-562_NHS 202 bp overlap
NELFE 3 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 293 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 149 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 86 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 163 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 121 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 112 bp overlap
OGG1 1 dataset
ChIP HEK293 GSE89017.OGG1.HEK293 264 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 283 bp overlap
PGR 2 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 58 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 355 bp overlap
PHF8 2 datasets
ChIP K-562 ENCSR000AQH.PHF8.K-562 242 bp overlap
ChIP K562 ENCFF217UCA 239 bp overlap
POLR2A 1 dataset
ChIP uterus ENCFF208ADI 355 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 311 bp overlap
ChIP K562 ENCFF648YPL 325 bp overlap
ChIP K562 ENCFF648YPL 57 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 262 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 182 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 263 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 214 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 220 bp overlap
RBFOX2 5 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 319 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 319 bp overlap
ChIP K562 ENCFF196WTG 355 bp overlap
ChIP K562 ENCFF196WTG 58 bp overlap
ChIP K562 ENCFF967GRF 346 bp overlap
RBM22 2 datasets
ChIP K-562 ENCSR848AOP.RBM22.K-562 246 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 229 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 355 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 355 bp overlap
ChIP K562 ENCFF421AVO 355 bp overlap
ChIP K562 ENCFF809XVG 355 bp overlap
ChIP MCF-7 ENCFF782EZS 310 bp overlap
ChIP MCF-7 ENCFF973QAD 323 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 312 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 230 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 65 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 230 bp overlap
RUNX1 5 datasets
ChIP AML GSE111821.RUNX1.AML 267 bp overlap
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 271 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 271 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 210 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 176 bp overlap
RUNX1T1 2 datasets
ChIP CD34 GSE80773.RUNX1T1.CD34 178 bp overlap
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 355 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 285 bp overlap
SAP30 1 dataset
ChIP K-562 ENCSR000AQJ.SAP30.K-562 148 bp overlap
SIN3A 4 datasets
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 202 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 162 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 246 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 197 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 160 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 63 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 355 bp overlap
SMARCB1 2 datasets
ChIP MCF-7_estrogen GSE123284.SMARCB1.MCF-7_estrogen 309 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 239 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 301 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 321 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 107 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 89 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 299 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 149 bp overlap
SPI1 2 datasets
ChIP K-562 GSE70482.SPI1.K-562 59 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 62 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 192 bp overlap
SRSF1 1 dataset
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 177 bp overlap
STAT3 14 datasets
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 291 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 218 bp overlap
ChIP T-47D_JC4735 GSE126004.STAT3.T-47D_JC4735 304 bp overlap
ChIP T-47D_JC4737 GSE126004.STAT3.T-47D_JC4737 247 bp overlap
ChIP T-47D_JC4739 GSE126004.STAT3.T-47D_JC4739 205 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 279 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 323 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 355 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 231 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 355 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 347 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 355 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 340 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 297 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 304 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 52 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 169 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 333 bp overlap
TFDP1 1 dataset
ChIP K-562 ENCSR224IKA.TFDP1.K-562 127 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 318 bp overlap
TP53 1 dataset
ChIP Calu-1_WT-DMSO GSE128673.TP53.Calu-1_WT-DMSO 250 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 230 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 332 bp overlap
ChIP K562 ENCFF053XDV 274 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 353 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 95 bp overlap
ZBTB7A 5 datasets
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 215 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 355 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 355 bp overlap
ChIP K562 ENCFF579ZGM 268 bp overlap
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 245 bp overlap
ZFX 1 dataset
ChIP K562 ENCFF536AJO 355 bp overlap
ZNF148 3 datasets
ChIP K-562 ENCSR018MSO.ZNF148.K-562 355 bp overlap
ChIP K562 ENCFF352SDL 210 bp overlap
ChIP K562 ENCFF352SDL 171 bp overlap