chr22 : 45,052,140 45,053,598
1,458 bp 132 TFs 6 linked genes
This 1.5 kb open chromatin element is linked to 6 target genes and is bound by 132 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
PHF21B 43.0 kb Distal Multiome
NUP50-DT 110.8 kb Distal Multiome
NUP50 111.0 kb Distal Multiome
KIAA0930 187.9 kb Distal Multiome
FAM118A 257.0 kb Distal Multiome
ARHGAP8 300.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:45,047,140 – 45,058,598
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
132 transcription factors
Source
Cell type
ARNT2 1 dataset
Motif DE_72h DE_72h-ARNT2_MA1464.2 8 bp overlap
Arnt 1 dataset
Motif DE_72h DE_72h-Arnt_MA0004.1 6 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 321 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 222 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 105 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 69 bp overlap
CLOCK 1 dataset
Motif DE_72h DE_72h-CLOCK_MA0819.3 7 bp overlap
CREB1 4 datasets
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 241 bp overlap
ChIP H1 ENCFF955PMP 321 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 138 bp overlap
Crx 1 dataset
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
DMRTA1 1 dataset
Motif DE_72h DE_72h-DMRTA1_MA1707.2 10 bp overlap
DMRTA2 1 dataset
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
DPRX 1 dataset
Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap
Ddit3::Cebpa 2 datasets
Motif DE_24h DE_24h-Ddit3Cebpa_MA0019.2 10 bp overlap
Motif DE_72h DE_72h-Ddit3Cebpa_MA0019.2 10 bp overlap
E2F6 5 datasets
Motif DE_24h DE_24h-E2F6_MA0471.3 8 bp overlap
Motif DE_72h DE_72h-E2F6_MA0471.3 8 bp overlap
ChIP H1 ENCFF785DWK 225 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 115 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 267 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 206 bp overlap
ESR1 1 dataset
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 189 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_72h DE_72h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 4 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 268 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 301 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 258 bp overlap
ChIP T98G GSE112240.EZH2.T98G 551 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 895 bp overlap
ChIP DE DE-FOXA2-2 879 bp overlap
FOXH1 2 datasets
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
Motif DE_72h DE_72h-FOXH1_MA0479.2 8 bp overlap
GATA2 2 datasets
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
Motif DE_72h DE_72h-GATA2_MA0036.4 7 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 1118 bp overlap
ChIP DE DE-GATA4-2 1295 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 375 bp overlap
ChIP foregut GSE117136.GATA4.foregut 307 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 860 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 854 bp overlap
GATA5 2 datasets
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 421 bp overlap
ChIP DE DE-GATA6-1 515 bp overlap
ChIP DE DE-GATA6-2 1201 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
Motif DE_72h DE_72h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 1219 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 1059 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 1091 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 946 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 1254 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 1001 bp overlap
ChIP foregut GSE117136.GATA6.foregut 327 bp overlap
ChIP foregut GSE117136.GATA6.foregut 276 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 895 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 272 bp overlap
GSC 1 dataset
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
Gata3 2 datasets
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
Motif DE_72h DE_72h-Gata3_MA0037.5 8 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HES6 1 dataset
Motif DE_72h DE_72h-HES6_MA1493.1 10 bp overlap
HEY2 1 dataset
Motif DE_72h DE_72h-HEY2_MA0649.2 9 bp overlap
HLF 1 dataset
Motif DE_72h DE_72h-HLF_MA0043.4 9 bp overlap
HMBOX1 1 dataset
Motif DE_72h DE_72h-HMBOX1_MA0895.2 7 bp overlap
Hmx2 1 dataset
Motif DE_72h DE_72h-Hmx2_MA0897.2 15 bp overlap
Irf1 1 dataset
Motif DE_72h DE_72h-Irf1_MA0050.4 11 bp overlap
JUN 11 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 1272 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 523 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 1021 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 516 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 596 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 599 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 585 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 389 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 432 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 276 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 658 bp overlap
KLF5 1 dataset
Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap
MAFF 1 dataset
Motif DE_72h DE_72h-MAFF_MA0495.4 11 bp overlap
MAFK 2 datasets
ChIP H1 ENCFF854XWE 285 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 196 bp overlap
MAX 4 datasets
Motif DE_72h DE_72h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF601FOM 325 bp overlap
ChIP H1 ENCFF914VQY 357 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 166 bp overlap
MAZ 1 dataset
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 242 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA1639.2 9 bp overlap
MEIS2 1 dataset
Motif DE_72h DE_72h-MEIS2_MA1640.2 9 bp overlap
MGA 1 dataset
Motif DE_72h DE_72h-MGA_MA0801.1 8 bp overlap
MLXIPL 1 dataset
Motif DE_72h DE_72h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_72h DE_72h-MNT_MA0825.2 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 223 bp overlap
MXI1 1 dataset
Motif DE_72h DE_72h-MXI1_MA1108.3 6 bp overlap
Mafb 1 dataset
Motif DE_72h DE_72h-Mafb_MA0117.3 11 bp overlap
Mecom 1 dataset
Motif DE_72h DE_72h-Mecom_MA0029.2 11 bp overlap
Mlxip 1 dataset
Motif DE_72h DE_72h-Mlxip_MA0622.2 6 bp overlap
Msgn1 1 dataset
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NANOG 10 datasets
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 418 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 632 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 259 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 277 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 993 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 528 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 266 bp overlap
ChIP hESC GSE18292.NANOG.hESC 325 bp overlap
ChIP hESC GSE20650.NANOG.hESC 189 bp overlap
NFATC3 1 dataset
Motif DE_72h DE_72h-NFATC3_MA0625.3 6 bp overlap
NFE2L1 2 datasets
ChIP WTC11 ENCFF644BPU 377 bp overlap
ChIP WTC11 ENCFF644BPU 244 bp overlap
NFIL3 1 dataset
Motif DE_72h DE_72h-NFIL3_MA0025.3 9 bp overlap
NR4A1 1 dataset
Motif DE_72h DE_72h-NR4A1_MA1112.3 8 bp overlap
NRL 1 dataset
Motif DE_72h DE_72h-NRL_MA0842.3 12 bp overlap
Nanog 1 dataset
Motif DE_72h DE_72h-Nanog_MA2339.1 7 bp overlap
Nfatc1 1 dataset
Motif DE_72h DE_72h-Nfatc1_MA0624.3 6 bp overlap
Npas2 1 dataset
Motif DE_72h DE_72h-Npas2_MA0626.2 8 bp overlap
OTX1 1 dataset
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PATZ1 1 dataset
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
PBX1 2 datasets
Motif DE_72h DE_72h-PBX1_MA0070.2 9 bp overlap
Motif DE_72h DE_72h-PBX1_MA0070.2 9 bp overlap
PBX2 2 datasets
Motif DE_72h DE_72h-PBX2_MA1113.3 9 bp overlap
Motif DE_72h DE_72h-PBX2_MA1113.3 9 bp overlap
PBX3 1 dataset
Motif DE_72h DE_72h-PBX3_MA1114.2 11 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 154 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 247 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 232 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 351 bp overlap
PITX1 1 dataset
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX3 1 dataset
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
PKNOX1 5 datasets
Motif DE_72h DE_72h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 213 bp overlap
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 264 bp overlap
ChIP K562 ENCFF236IUS 301 bp overlap
POU2F1 1 dataset
Motif DE_72h DE_72h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif DE_72h DE_72h-POU2F3_MA0627.3 9 bp overlap
POU3F1 2 datasets
Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap
Motif DE_72h DE_72h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_72h DE_72h-POU3F2_MA0787.1 12 bp overlap
POU4F1 1 dataset
Motif DE_72h DE_72h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_72h DE_72h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_72h DE_72h-POU4F3_MA0791.2 12 bp overlap
POU5F1 8 datasets
Motif DE_72h DE_72h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 896 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 313 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 434 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 194 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 329 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 58 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 523 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 938 bp overlap
RHOXF1 1 dataset
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 140 bp overlap
SCRT1 1 dataset
Motif DE_72h DE_72h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_72h DE_72h-SCRT2_MA0744.3 10 bp overlap
SMAD2 3 datasets
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 160 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 472 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 1039 bp overlap
SMAD2_3 6 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 1211 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 1010 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 1141 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 1144 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 1143 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 392 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 175 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 158 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 160 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 435 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 261 bp overlap
SOX17 2 datasets
ChIP DE_D2 DED2-SOX17_Batch_II 294 bp overlap
ChIP DE_D2 DED2-SOX17_Batch_II 198 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 1440 bp overlap
SOX2 1 dataset
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
SOX21 1 dataset
Motif DE_72h DE_72h-SOX21_MA0866.1 15 bp overlap
SP1 4 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 143 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 196 bp overlap
SP4 1 dataset
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
SP5 3 datasets
Motif DE_24h DE_24h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SPIC 1 dataset
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 213 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 273 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap
TBX4 1 dataset
Motif DE_72h DE_72h-TBX4_MA0806.1 8 bp overlap
TCF7L1 1 dataset
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 204 bp overlap
TP53 3 datasets
ChIP H9 GSE142050.TP53.H9 566 bp overlap
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 520 bp overlap
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 150 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 280 bp overlap
TRPS1 2 datasets
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Motif DE_72h DE_72h-TRPS1_MA1970.2 8 bp overlap
Wt1 1 dataset
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZBTB18 1 dataset
Motif DE_72h DE_72h-ZBTB18_MA0698.2 11 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 107 bp overlap
ZIM3 1 dataset
Motif DE_72h DE_72h-ZIM3_MA1709.2 11 bp overlap
ZNF148 1 dataset
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF189 1 dataset
Motif DE_72h DE_72h-ZNF189_MA1725.2 9 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 301 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 145 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 137 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 164 bp overlap
ZNF490 1 dataset
ChIP HEK293 GSE76494.ZNF490.HEK293 269 bp overlap
ZNF558 1 dataset
Motif DE_72h DE_72h-ZNF558_MA2335.1 29 bp overlap
ZNF682 1 dataset
Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap
Zic3 1 dataset
Motif DE_72h DE_72h-Zic3_MA0697.3 7 bp overlap