chr19 : 53,158,241 53,158,679
438 bp 103 TFs 1 linked gene
This 438 bp open chromatin element is linked to ZNF347 and is bound by 103 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ZNF347 373 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:53,153,241 – 53,163,679
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
ARID2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 433 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 417 bp overlap
ARID4B 2 datasets
ChIP K562 ENCFF791HBV 321 bp overlap
ChIP K562 ENCFF791HBV 408 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 396 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 302 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 80 bp overlap
BCOR 4 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 193 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 174 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 395 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 438 bp overlap
BRD2 4 datasets
ChIP K-562_DMSO GSE138084.BRD2.K-562_DMSO 213 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 319 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 215 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 242 bp overlap
BRD4 17 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 222 bp overlap
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 438 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 206 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 378 bp overlap
ChIP CLL_patient3_4h_CpG_BET GSE109411.BRD4.CLL_patient3_4h_CpG_BET 282 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 438 bp overlap
ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 253 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 343 bp overlap
ChIP DND41_E GSE54379.BRD4.DND41_E 236 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 178 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 234 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 388 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 380 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 150 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 371 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 211 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 438 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 238 bp overlap
CBX1 2 datasets
ChIP K-562 ENCSR948QLZ.CBX1.K-562 151 bp overlap
ChIP K562 ENCFF008KGK 333 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CDK6 1 dataset
ChIP KB GSE52469.CDK6.KB 110 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 431 bp overlap
CHD1 3 datasets
ChIP K-562 ENCSR000AQD.CHD1.K-562 273 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 371 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 213 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 127 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 167 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 194 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 181 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 254 bp overlap
E2F1 4 datasets
ChIP K562 ENCFF163BSY 401 bp overlap
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 375 bp overlap
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 438 bp overlap
ChIP mesenchymal GSE77260.E2F1.mesenchymal 225 bp overlap
E2F3 2 datasets
ChIP K-562 ENCSR036QIR.E2F3.K-562 211 bp overlap
ChIP K562 ENCFF922ILX 323 bp overlap
E2F4 2 datasets
ChIP K-562 ENCSR000EWL.E2F4.K-562 162 bp overlap
ChIP K562 ENCFF599EKU 311 bp overlap
E2F6 6 datasets
ChIP H1 ENCFF785DWK 330 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 438 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 398 bp overlap
ChIP K562 ENCFF136LTS 332 bp overlap
ChIP K562 ENCFF163WMT 237 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 392 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 146 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF940SAL 250 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 57 bp overlap
ERG 3 datasets
ChIP K-562 GSE23730.ERG.K-562 210 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 267 bp overlap
ESR1 3 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 147 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 346 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 386 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 169 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 273 bp overlap
GABPA 2 datasets
ChIP K562 ENCFF139LXS 427 bp overlap
ChIP K562 ENCFF139LXS 81 bp overlap
GTF2F1 1 dataset
ChIP K-562 GSE120104.GTF2F1.K-562 248 bp overlap
GTF3C2 3 datasets
ChIP H9 GSE94418.GTF3C2.H9 249 bp overlap
ChIP T98G GSE120162.GTF3C2.T98G 136 bp overlap
ChIP T98G_serum GSE120162.GTF3C2.T98G_serum 98 bp overlap
HDAC1 3 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 280 bp overlap
ChIP K-562 ENCSR000AQF.HDAC1.K-562 214 bp overlap
ChIP K562 ENCFF872AQB 333 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR000AQG.HDAC2.K-562 143 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 230 bp overlap
ChIP PC-3 GSE147455.HDAC2.PC-3 169 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 199 bp overlap
HMGN3 1 dataset
ChIP K-562 ENCSR000DOB.HMGN3.K-562 210 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 205 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 172 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 244 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 219 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 296 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 329 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 231 bp overlap
KDM4A 4 datasets
ChIP H1 ENCFF078LED 375 bp overlap
ChIP H1 ENCFF078LED 206 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 421 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 231 bp overlap
KDM5B 3 datasets
ChIP K-562 ENCSR000AQA.KDM5B.K-562 140 bp overlap
ChIP K562 ENCFF049WWX 438 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 222 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 305 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 438 bp overlap
KLF6 2 datasets
ChIP PDAC GSE64557.KLF6.PDAC 113 bp overlap
ChIP PDAC GSE64557.KLF6.PDAC 271 bp overlap
KMT2A 3 datasets
ChIP CCRF-CEM GSE83671.KMT2A.CCRF-CEM 246 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 332 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 250 bp overlap
L3MBTL2 2 datasets
ChIP K562 ENCFF320EQC 438 bp overlap
ChIP K562 ENCFF320EQC 438 bp overlap
LIN54 1 dataset
ChIP HepG2 ENCFF662XDE 438 bp overlap
MAX 8 datasets
ChIP H1 ENCFF914VQY 96 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 393 bp overlap
ChIP K562 ENCFF524IJO 372 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 221 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 297 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 184 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 297 bp overlap
ChIP WTC11 ENCFF223QFY 265 bp overlap
MAZ 3 datasets
ChIP IMR-90 ENCFF682IKN 345 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 102 bp overlap
ChIP K562 ENCFF982GSZ 401 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 407 bp overlap
ChIP K562 ENCFF140CEX 332 bp overlap
MNT 1 dataset
ChIP K562 ENCFF820IGH 438 bp overlap
MXI1 3 datasets
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 159 bp overlap
ChIP SK-N-SH ENCFF746HVJ 393 bp overlap
ChIP SK-N-SH ENCFF746HVJ 271 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 308 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 438 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 317 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 326 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 99 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 258 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 204 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 438 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 352 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 367 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 324 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 438 bp overlap
PHF8 6 datasets
ChIP H1 ENCFF427UFV 364 bp overlap
ChIP HepG2 ENCFF065NWR 334 bp overlap
ChIP HepG2 ENCFF065NWR 438 bp overlap
ChIP K-562 ENCSR000AQH.PHF8.K-562 396 bp overlap
ChIP K562 ENCFF217UCA 426 bp overlap
ChIP WA01 ENCSR000ATK.PHF8.WA01 186 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF631ERR 230 bp overlap
ChIP GM12892 ENCFF245LYF 341 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 438 bp overlap
ChIP K562 ENCFF648YPL 438 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 386 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 438 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 173 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 406 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 438 bp overlap
RAD21 1 dataset
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 74 bp overlap
RB1 1 dataset
ChIP K562 ENCFF627ZBG 333 bp overlap
RBBP5 4 datasets
ChIP K-562 ENCSR000AQI.RBBP5.K-562 352 bp overlap
ChIP K562 ENCFF070CVK 438 bp overlap
ChIP K562 ENCFF070CVK 438 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 345 bp overlap
RBFOX2 4 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 438 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 438 bp overlap
ChIP K562 ENCFF196WTG 438 bp overlap
ChIP K562 ENCFF967GRF 438 bp overlap
RBM22 1 dataset
ChIP K-562 GSE120104.RBM22.K-562 179 bp overlap
RBM39 1 dataset
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 124 bp overlap
RNF2 4 datasets
ChIP K562 ENCFF061ATI 328 bp overlap
ChIP K562 ENCFF653BQJ 290 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 55 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 188 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 227 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 150 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 156 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 438 bp overlap
SAP30 2 datasets
ChIP K-562 ENCSR000AQJ.SAP30.K-562 159 bp overlap
ChIP WA01 ENCSR000ATR.SAP30.WA01 199 bp overlap
SIN3A 3 datasets
ChIP K-562 ENCSR920BLG.SIN3A.K-562 132 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 275 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 107 bp overlap
SMAD5 1 dataset
ChIP K-562 ENCSR000FCD.SMAD5.K-562 111 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 95 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 438 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 327 bp overlap
ChIP K562 ENCFF316MCJ 218 bp overlap
ChIP K562 ENCFF316MCJ 349 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 252 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 282 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 255 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 204 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 147 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 115 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 230 bp overlap
TFAP2B 2 datasets
ChIP SK-N-SH ENCFF869XXQ 409 bp overlap
ChIP SK-N-SH ENCFF869XXQ 250 bp overlap
TFAP4 2 datasets
ChIP K562 ENCFF727PXG 401 bp overlap
ChIP K562 ENCFF727PXG 200 bp overlap
TFDP1 3 datasets
ChIP K-562 ENCSR017GBO.TFDP1.K-562 267 bp overlap
ChIP K562 ENCFF584VSB 438 bp overlap
ChIP K562 ENCFF794ZXJ 438 bp overlap
TFDP2 1 dataset
ChIP HepG2 ENCFF794WDW 410 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 390 bp overlap
TP63 2 datasets
ChIP foreskin GSE126390.TP63.foreskin 161 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 189 bp overlap
TRIM24 1 dataset
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 318 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 241 bp overlap
USF1 1 dataset
ChIP WTC11 ENCFF699QGS 185 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 296 bp overlap
ZBTB33 1 dataset
ChIP HepG2 ENCFF778UKV 337 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 329 bp overlap
ZBTB7A 4 datasets
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 206 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 169 bp overlap
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 138 bp overlap
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 263 bp overlap
ZFX 2 datasets
ChIP K-562 ENCSR920ASP.ZFX.K-562 201 bp overlap
ChIP K562 ENCFF536AJO 438 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 206 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 170 bp overlap
ZNF282 3 datasets
ChIP K-562 ENCSR742TMU.ZNF282.K-562 378 bp overlap
ChIP K562 ENCFF657WOV 180 bp overlap
ChIP K562 ENCFF657WOV 383 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 240 bp overlap
ChIP HepG2 ENCFF653WIX 438 bp overlap