chr19 : 45,253,538 45,253,927
389 bp 102 TFs 1 linked gene
This 389 bp open chromatin element is linked to EXOC3L2 and is bound by 102 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
EXOC3L2 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:45,248,538 – 45,258,927
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 179 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 209 bp overlap
ARNT 2 datasets
ChIP K-562 ENCSR613NUC.ARNT.K-562 249 bp overlap
ChIP RCC4 GSE85352.ARNT.RCC4 159 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 389 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 79 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 389 bp overlap
ChIP K562 ENCFF343XWA 260 bp overlap
BMPR1A 1 dataset
ChIP HUVEC-C GSE60156.BMPR1A.HUVEC-C 81 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 116 bp overlap
BRD9 1 dataset
ChIP K-562 ENCSR177XCS.BRD9.K-562 241 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 187 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF410AQU 345 bp overlap
CTCF 28 datasets
ChIP B cell ENCFF500PZO 116 bp overlap
ChIP B-cell ENCSR000AUV.CTCF.B-cell 230 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 56 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 58 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 50 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 93 bp overlap
ChIP GM23338 ENCFF832KWE 87 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 62 bp overlap
ChIP KMS-11 ENCFF853JKX 79 bp overlap
ChIP PC-3 ENCFF487TUI 63 bp overlap
ChIP PC-9 ENCFF539ULB 50 bp overlap
ChIP RWPE2 ENCFF911IEE 142 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 78 bp overlap
ChIP VCaP ENCFF858YQT 86 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 101 bp overlap
ChIP astrocyte ENCFF558APA 96 bp overlap
ChIP breast epithelium ENCFF341QWO 99 bp overlap
ChIP chondrocyte ENCFF134ORZ 73 bp overlap
ChIP endothelial cell ENCFF663LIE 50 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 84 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 226 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 116 bp overlap
ChIP myotube ENCFF981UHL 84 bp overlap
ChIP natural killer cell ENCFF517SNI 109 bp overlap
ChIP neural progenitor cell ENCFF581WPG 64 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 82 bp overlap
ChIP spleen ENCFF520HPZ 76 bp overlap
ChIP upper lobe of left lung ENCFF962AIJ 52 bp overlap
DACH1 2 datasets
ChIP K-562 ENCSR030TJP.DACH1.K-562 224 bp overlap
ChIP K562 ENCFF574LOW 380 bp overlap
DNMT3B 1 dataset
ChIP HUES-8_TripleKO-TET1-2-3 GSE99346.DNMT3B.HUES-8_TripleKO-TET1-2-3 211 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 257 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF813OXE 131 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR502OEK.ELF1.K-562 269 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 94 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 209 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 375 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 361 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 389 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 104 bp overlap
ChIP MCF-7 ENCFF282FWZ 300 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 282 bp overlap
FOSL2 4 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 111 bp overlap
ChIP MCF-7 ENCSR546KCN.FOSL2.MCF-7 197 bp overlap
ChIP SK-N-SH ENCFF127ZDW 185 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 131 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 371 bp overlap
ChIP DE DE-FOXA2-2 389 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 162 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 132 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 158 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 255 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 55 bp overlap
GATA2 4 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 246 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 207 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 270 bp overlap
ChIP K562 ENCFF513FTZ 301 bp overlap
GATA3 3 datasets
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 174 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 196 bp overlap
ChIP T47D-A1-2_Dex GSE112491.GATA3.T47D-A1-2_Dex 186 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 389 bp overlap
ChIP DE DE-GATA4-2 389 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 389 bp overlap
ChIP DE DE-GATA6-2 382 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 367 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 304 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 389 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 389 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 389 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 295 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 280 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 125 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 199 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 389 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 313 bp overlap
ChIP K562 ENCFF744ALD 299 bp overlap
HDGF 3 datasets
ChIP HEK293T ENCFF357ANX 205 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 389 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 389 bp overlap
ID3 3 datasets
ChIP K-562 ENCSR005NMT.ID3.K-562 389 bp overlap
ChIP K562 ENCFF170RNI 380 bp overlap
ChIP K562 ENCFF170RNI 277 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 156 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 195 bp overlap
JUN 5 datasets
ChIP K562 ENCFF372VWH 291 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 389 bp overlap
ChIP MCF-7_abemaciclib GSE157385.JUN.MCF-7_abemaciclib 306 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 167 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 128 bp overlap
JUNB 2 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 335 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 162 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF971JKN 175 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 138 bp overlap
KDM1A 19 datasets
ChIP A-549 ENCSR639GWS.KDM1A.A-549 251 bp overlap
ChIP H1 ENCFF696SGD 389 bp overlap
ChIP H1 ENCFF696SGD 210 bp overlap
ChIP HepG2 ENCFF240UWG 389 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 389 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 389 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 275 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 254 bp overlap
ChIP K562 ENCFF128TYE 333 bp overlap
ChIP K562 ENCFF133OLU 333 bp overlap
ChIP K562 ENCFF934ZRG 133 bp overlap
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 296 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 233 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 355 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 262 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 244 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 389 bp overlap
ChIP SU-DHL-4 GSE119038.KDM1A.SU-DHL-4 103 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 389 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 263 bp overlap
LARP7 1 dataset
ChIP GM12878 ENCFF513CEX 188 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 188 bp overlap
MBD3 1 dataset
ChIP MCF-7 GSE44737.MBD3.MCF-7 180 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 163 bp overlap
MNT 3 datasets
ChIP K-562 ENCSR512NLO.MNT.K-562 138 bp overlap
ChIP K562 ENCFF450LDL 91 bp overlap
ChIP K562 ENCFF820IGH 245 bp overlap
MYCN 2 datasets
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 389 bp overlap
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 79 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 151 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 120 bp overlap
NCOA4 2 datasets
ChIP K-562 ENCSR119ULQ.NCOA4.K-562 217 bp overlap
ChIP K562 ENCFF403UQZ 161 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 188 bp overlap
NFXL1 4 datasets
ChIP GM12878 ENCFF513WDR 215 bp overlap
ChIP GM12878 ENCSR746XEG.NFXL1.GM12878 145 bp overlap
ChIP K-562 ENCSR085DDI.NFXL1.K-562 241 bp overlap
ChIP K562 ENCFF619QDE 206 bp overlap
NOTCH1 2 datasets
ChIP HPBALL GSE39263.NOTCH1.HPBALL 185 bp overlap
ChIP HPBALL GSE39263.NOTCH1.HPBALL 50 bp overlap
POLR2A 1 dataset
ChIP adrenal gland ENCFF843OBJ 274 bp overlap
PTBP1 3 datasets
ChIP K-562 GSE120104.PTBP1.K-562 337 bp overlap
ChIP K-562 ENCSR948KMB.PTBP1.K-562 229 bp overlap
ChIP K562 ENCFF773HPT 267 bp overlap
RAD51 2 datasets
ChIP K-562 ENCSR524BUE.RAD51.K-562 276 bp overlap
ChIP K562 ENCFF133ELP 90 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 389 bp overlap
ChIP K562 ENCFF248CGR 152 bp overlap
ChIP K562 ENCFF957ORK 152 bp overlap
RCOR1 4 datasets
ChIP IMR-90 ENCFF644MZN 285 bp overlap
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 134 bp overlap
ChIP MCF-7 ENCSR391JII.RCOR1.MCF-7 270 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 235 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
RFX1 7 datasets
ChIP K-562 ENCSR041AXL.RFX1.K-562 168 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 120 bp overlap
ChIP K562 ENCFF421AVO 140 bp overlap
ChIP K562 ENCFF809XVG 133 bp overlap
ChIP MCF-7 ENCFF782EZS 72 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 88 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 80 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 196 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 379 bp overlap
SIN3A 1 dataset
ChIP MCF-7 ENCSR468LUO.SIN3A.MCF-7 168 bp overlap
SMAD3 2 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 271 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 265 bp overlap
SMAD4 2 datasets
ChIP KGN_TGF GSE138496.SMAD4.KGN_TGF 90 bp overlap
ChIP KGN_TGF GSE138496.SMAD4.KGN_TGF 136 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 231 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 222 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 156 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 284 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 374 bp overlap
SMARCA5 4 datasets
ChIP GM12878 ENCFF327LDR 263 bp overlap
ChIP GM12878 ENCSR706YUH.SMARCA5.GM12878 210 bp overlap
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 389 bp overlap
ChIP K562 ENCFF936KHY 278 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 101 bp overlap
SOX4 2 datasets
ChIP MDA-MB-231 GSE104760.SOX4.MDA-MB-231 250 bp overlap
ChIP MDA-MB-231_TGFb GSE104760.SOX4.MDA-MB-231_TGFb 386 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 232 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 131 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap
TBX21 1 dataset
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 221 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 91 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 255 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 103 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 157 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 319 bp overlap
USF2 1 dataset
ChIP K562 ENCFF306QPU 100 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 111 bp overlap
ZBTB2 1 dataset
ChIP K-562 ENCSR230PTV.ZBTB2.K-562 239 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752TCU 272 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 160 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 69 bp overlap
ZFP36 4 datasets
ChIP GM12878 ENCFF234WRG 106 bp overlap
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 226 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 353 bp overlap
ChIP K562 ENCFF255RZG 127 bp overlap
ZIC5 3 datasets
ChIP HCT-116_WT-CT289 GSE127960.ZIC5.HCT-116_WT-CT289 315 bp overlap
ChIP HCT-116_sc1 GSE127960.ZIC5.HCT-116_sc1 347 bp overlap
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 216 bp overlap
ZMYM3 9 datasets
ChIP GM12878 GSE97661.ZMYM3.GM12878 278 bp overlap
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 231 bp overlap
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 169 bp overlap
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 192 bp overlap
ChIP HepG2 ENCFF408KTI 301 bp overlap
ChIP HepG2 ENCFF408KTI 101 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 389 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 389 bp overlap
ChIP K562 ENCFF361LXT 110 bp overlap
ZNF143 2 datasets
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 214 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 143 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 315 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 137 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 177 bp overlap
ZNF629 3 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 374 bp overlap
ChIP HepG2 ENCFF490FFQ 347 bp overlap
ChIP HepG2 ENCFF490FFQ 210 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF505NFV 100 bp overlap
ZNF768 3 datasets
ChIP HEK293 ENCFF579QSI 243 bp overlap
ChIP HEK293 ENCSR070HWF.ZNF768.HEK293 220 bp overlap
ChIP HepG2 ENCFF388QCK 245 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 189 bp overlap