chr19 : 18,606,608 18,607,085
477 bp 100 TFs 2 linked genes
This 477 bp open chromatin element is linked to CRLF1 and TMEM59L and is bound by 100 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
CRLF1 at TSS At TSS Proximity
TMEM59L 5.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:18,601,608 – 18,612,085
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
100 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP HepG2 ENCFF358CXO 61 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 149 bp overlap
ARNT 2 datasets
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 316 bp overlap
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 310 bp overlap
ARNTL 1 dataset
ChIP HepG2 ENCFF217GCH 82 bp overlap
BCL11A 1 dataset
ChIP MDA-MB-157 ERP003925.BCL11A.MDA-MB-157 316 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 131 bp overlap
BRD2 3 datasets
ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 193 bp overlap
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 278 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 311 bp overlap
BRD4 9 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 136 bp overlap
ChIP HAP1 GSE108387.BRD4.HAP1 176 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 215 bp overlap
ChIP HeLa GSE151038.BRD4.HeLa 225 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 275 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 477 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 115 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 398 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 146 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 263 bp overlap
CBX7 2 datasets
ChIP hESC GSE133412.CBX7.hESC 468 bp overlap
ChIP hESC_TKO GSE133412.CBX7.hESC_TKO 464 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 120 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 99 bp overlap
CTCF 2 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 134 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 76 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 118 bp overlap
E2F1 1 dataset
ChIP HeLa-S3 ENCSR000EVM.E2F1.HeLa-S3 145 bp overlap
EP300 1 dataset
ChIP MCF-7_shCtrl GSE128445.EP300.MCF-7_shCtrl 246 bp overlap
ESR1 2 datasets
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 144 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 50 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 235 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 157 bp overlap
EZH2 22 datasets
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 194 bp overlap
ChIP DU145_SH4 GSE135623.EZH2.DU145_SH4 221 bp overlap
ChIP H1 ENCFF232NZA 155 bp overlap
ChIP H1 ENCFF232NZA 272 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 153 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 54 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 156 bp overlap
ChIP PC-9 ENCFF634ONR 138 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 170 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 208 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 191 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 103 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 149 bp overlap
ChIP hESC GSE113817.EZH2.hESC 283 bp overlap
ChIP hepatocyte ENCFF118DKH 55 bp overlap
ChIP hepatocyte ENCFF552DZB 69 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 96 bp overlap
ChIP neural progenitor cell ENCFF018MKA 139 bp overlap
ChIP neural progenitor cell ENCFF018MKA 252 bp overlap
ChIP neural progenitor cell ENCFF472NFV 172 bp overlap
ChIP neural progenitor cell ENCFF472NFV 284 bp overlap
ChIP peripheral-blood-mononuclear-cell_B-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell_B-cell 56 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE128445.GATA3.MCF-7 226 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 151 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 148 bp overlap
GLIS2 2 datasets
ChIP HEK293 ENCFF446EIF 111 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 130 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 55 bp overlap
GTF2F1 1 dataset
ChIP K562 ENCFF501ZHS 262 bp overlap
HDAC1 2 datasets
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 55 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 88 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 94 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 53 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 384 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCFF252CFL 206 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 74 bp overlap
HMGB1 1 dataset
ChIP HUVEC-C GSE98245.HMGB1.HUVEC-C 65 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 144 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 89 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 128 bp overlap
ChIP hESC GSE133412.JARID2.hESC 268 bp overlap
KDM2A 1 dataset
ChIP HepG2 ENCFF491GTR 326 bp overlap
KDM4A 3 datasets
ChIP WA01 ENCSR000AVC.KDM4A.WA01 247 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 115 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 219 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 130 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 195 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 171 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 143 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 211 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 130 bp overlap
KLF9 2 datasets
ChIP HEK293 ENCFF588INF 184 bp overlap
ChIP HEK293 ENCSR076EZB.KLF9.HEK293 130 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 95 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 108 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 233 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 176 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 158 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MTF2 1 dataset
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 129 bp overlap
MYC 1 dataset
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 152 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 159 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 319 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 307 bp overlap
NRF1 2 datasets
ChIP HCC1954 GSE67867.NRF1.HCC1954 172 bp overlap
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 147 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 153 bp overlap
ChIP HepG2 ENCFF723PFC 178 bp overlap
PCBP1 3 datasets
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 99 bp overlap
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 99 bp overlap
ChIP K-562 ENCSR052PTN.PCBP1.K-562 105 bp overlap
PHIP 3 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 58 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 50 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 131 bp overlap
POLR2A 3 datasets
ChIP HepG2 ENCFF718XAJ 52 bp overlap
ChIP HepG2 ENCFF718XAJ 203 bp overlap
ChIP MCF-7 ENCFF309IKZ 331 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 477 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 477 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 477 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 210 bp overlap
SIN3A 5 datasets
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 145 bp overlap
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 114 bp overlap
ChIP HepG2 ENCFF394WQQ 78 bp overlap
ChIP HepG2 ENCFF394WQQ 415 bp overlap
ChIP HepG2 ENCFF394WQQ 297 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 349 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 67 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 124 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 86 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 108 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 217 bp overlap
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 176 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-K785R 307 bp overlap
SMC1 1 dataset
ChIP IMR-90_OIS GSE118494.SMC1.IMR-90_OIS 151 bp overlap
SMC1A 1 dataset
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 128 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 347 bp overlap
SP1 1 dataset
ChIP HEK293 GSE76494.SP1.HEK293 163 bp overlap
SP2 3 datasets
ChIP HEK293 ENCFF181QXT 196 bp overlap
ChIP HEK293 ENCSR807LQP.SP2.HEK293 162 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 146 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 220 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 174 bp overlap
SP4 1 dataset
ChIP HEK293 GSE76494.SP4.HEK293 161 bp overlap
SP5 1 dataset
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 129 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 140 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 477 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 477 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 163 bp overlap
ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 125 bp overlap
SUZ12 9 datasets
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 271 bp overlap
ChIP H1 ENCFF881NFR 171 bp overlap
ChIP H1 ENCFF881NFR 266 bp overlap
ChIP HEK293T_PCGF1352fl GSE119618.SUZ12.HEK293T_PCGF1352fl 258 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 275 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 236 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 254 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 253 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 92 bp overlap
TAF1 4 datasets
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 195 bp overlap
ChIP Hep-G2 ENCSR000BJN.TAF1.Hep-G2 156 bp overlap
ChIP Hep-G2 ENCSR918OKK.TAF1.Hep-G2 101 bp overlap
ChIP HepG2 ENCFF961AVP 408 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 205 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 93 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 87 bp overlap
TMF1 1 dataset
ChIP HepG2 ENCFF605HHR 190 bp overlap
TRIM24 1 dataset
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 311 bp overlap
VEZF1 3 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 200 bp overlap
ChIP K562 ENCFF053XDV 433 bp overlap
ChIP K562 ENCFF053XDV 188 bp overlap
ZBTB10 2 datasets
ChIP HEK293 ENCFF679BCK 226 bp overlap
ChIP HEK293 ENCSR004PLU.ZBTB10.HEK293 147 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 275 bp overlap
ChIP HEK293 ENCFF752TCU 220 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 167 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 133 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 147 bp overlap
ZBTB7A 5 datasets
ChIP HEK293 ENCFF420MRZ 231 bp overlap
ChIP HEK293 ENCSR773REP.ZBTB7A.HEK293 148 bp overlap
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 109 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 137 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 173 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 238 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 184 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 239 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 259 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 170 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 174 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 143 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 201 bp overlap
ZNF547 1 dataset
ChIP HepG2 ENCFF834XWI 69 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 276 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 141 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 131 bp overlap
ZNF777 1 dataset
ChIP HepG2 ENCFF362XDA 69 bp overlap