chr15:90,152,072–90,152,533

chr15 : 90,152,072 – 90,152,533

461 bp 92 TFs 7 linked genes

This 461 bp open chromatin element is linked to 7 target genes and is bound by 92 transcription factors.

Linked Genes

7 genes

Gene	Expression	Dist. to TSS	Distance	Link type
SEMA4B		32.6 kb	Distal	Multiome
IDH2		49.8 kb	Distal	Multiome
CIB1		81.6 kb	Distal	Multiome+HiCAR
NGRN		113.3 kb	Distal	Multiome+HiCAR
ZNF710		151.0 kb	Distal	Multiome
IQGAP1		235.9 kb	Distal	Multiome
AP3S2		258.3 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

92 transcription factors

ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 227 bp overlap

ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 413 bp overlap

ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 438 bp overlap

ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 375 bp overlap

ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 308 bp overlap

ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 167 bp overlap

ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 321 bp overlap

ChIP prostate GSE65478.AR.prostate 396 bp overlap

ChIP prostate GSE56288.AR.prostate 208 bp overlap

ChIP prostate-cancer_PDX_141 GSE130408.AR.prostate-cancer_PDX_141 202 bp overlap

ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 136 bp overlap

ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 121 bp overlap

ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 419 bp overlap

ChIP prostate_2752_T GSE130408.AR.prostate_2752_T 217 bp overlap

ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 374 bp overlap

ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 322 bp overlap

ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 338 bp overlap

ChIP prostate_P25 GSE130408.AR.prostate_P25 252 bp overlap

ChIP prostate_P27 GSE130408.AR.prostate_P27 184 bp overlap

ChIP prostate_P5_T GSE130408.AR.prostate_P5_T 249 bp overlap

ASH2L 4 datasets

ChIP H1 ENCFF399KAM 461 bp overlap

ChIP VCaP GSE60841.ASH2L.VCaP 214 bp overlap

ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 461 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 419 bp overlap

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 411 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 237 bp overlap

BRD4 8 datasets

ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 236 bp overlap

ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 136 bp overlap

ChIP Jurkat GSE83777.BRD4.Jurkat 251 bp overlap

ChIP MCF-7_parental GSE123284.BRD4.MCF-7_parental 66 bp overlap

ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 323 bp overlap

ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 381 bp overlap

ChIP hESC GSE33281.BRD4.hESC 167 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 372 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 185 bp overlap

CHD2 2 datasets

ChIP H1 ENCFF991MKH 292 bp overlap

ChIP WA01 ENCSR000EBT.CHD2.WA01 219 bp overlap

ChIP H1 ENCFF126NLU 447 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 279 bp overlap

CTCF 3 datasets

ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 96 bp overlap

ChIP prostate gland ENCFF979KAF 381 bp overlap

ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 240 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 192 bp overlap

ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 224 bp overlap

EGR1 3 datasets

ChIP H1 ENCFF451BLH 213 bp overlap

ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 213 bp overlap

ChIP K-562 ENCSR000BNE.EGR1.K-562 110 bp overlap

EP300 2 datasets

ChIP H1 ENCFF927IYK 218 bp overlap

ChIP WA01 ENCSR000BKK.EP300.WA01 192 bp overlap

ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 331 bp overlap

ChIP VCaP_DHT GSE79128.ERG.VCaP_DHT 273 bp overlap

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 176 bp overlap

ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 367 bp overlap

ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 194 bp overlap

ESR1 6 datasets

ChIP breast_tumor_Male_19 GSE104399.ESR1.breast_tumor_Male_19 92 bp overlap

ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 276 bp overlap

ChIP endometrioid-adenocarcinoma_tumor_3 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_3 179 bp overlap

ChIP endometrioid-adenocarcinoma_tumor_6 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_6 208 bp overlap

ChIP primary-breast-cancer_B1_DSG GSE114737.ESR1.primary-breast-cancer_B1_DSG 206 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 387 bp overlap

ChIP hESC ENCSR534VHI.ETS1.hESC 314 bp overlap

FOXA1 18 datasets

ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 203 bp overlap

ChIP MCF-7 GSE72249.FOXA1.MCF-7 125 bp overlap

ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 110 bp overlap

ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 106 bp overlap

ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 318 bp overlap

ChIP breast_tumor_Male_3 GSE104399.FOXA1.breast_tumor_Male_3 223 bp overlap

ChIP liver ENCFF537QZV 162 bp overlap

ChIP liver ENCSR324RCI.FOXA1.liver 165 bp overlap

ChIP liver ERP002306.FOXA1.liver 151 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 100 bp overlap

ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 450 bp overlap

ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 428 bp overlap

ChIP primary-prostate-cancer_P4_DSG GSE114737.FOXA1.primary-prostate-cancer_P4_DSG 180 bp overlap

ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 284 bp overlap

ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 190 bp overlap

ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 298 bp overlap

ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 218 bp overlap

ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 287 bp overlap

FOXA2 4 datasets

ChIP liver ENCFF877SFI 166 bp overlap

ChIP liver ENCSR080XEY.FOXA2.liver 158 bp overlap

ChIP liver ENCSR310NYI.FOXA2.liver 85 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 105 bp overlap

FOXK1 1 dataset

ChIP WTC11 ENCFF875IGU 326 bp overlap

FOXK2 1 dataset

ChIP K-562 ENCSR302AWT.FOXK2.K-562 232 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 412 bp overlap

FOXP4 1 dataset

ChIP WTC11 ENCFF708TAF 362 bp overlap

GABPA 1 dataset

ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 153 bp overlap

GATA2 1 dataset

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 106 bp overlap

GATA4 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 149 bp overlap

GRHL2 3 datasets

ChIP HBE GSE46194.GRHL2.HBE 157 bp overlap

ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 212 bp overlap

ChIP T-47D GSE99680.GRHL2.T-47D 298 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap

ChIP K-562 ENCSR563YDA.HDGF.K-562 79 bp overlap

HNF1B 1 dataset

ChIP Hep-G2 ENCSR127XTZ.HNF1B.Hep-G2 186 bp overlap

HNF4A 2 datasets

ChIP liver ENCFF354NRH 247 bp overlap

ChIP liver ENCFF449HPV 248 bp overlap

HOXB13 17 datasets

ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 251 bp overlap

ChIP prostate_2078_T GSE130408.HOXB13.prostate_2078_T 169 bp overlap

ChIP prostate_2480 GSE130408.HOXB13.prostate_2480 243 bp overlap

ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 233 bp overlap

ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 191 bp overlap

ChIP prostate_2484 GSE130408.HOXB13.prostate_2484 277 bp overlap

ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 226 bp overlap

ChIP prostate_P13 GSE130408.HOXB13.prostate_P13 148 bp overlap

ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 204 bp overlap

ChIP prostate_P19 GSE130408.HOXB13.prostate_P19 355 bp overlap

ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 233 bp overlap

ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 219 bp overlap

ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 307 bp overlap

ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 279 bp overlap

ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 228 bp overlap

ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 280 bp overlap

ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 215 bp overlap

Motif ES_0h ES_0h-Irf1_MA0050.4 11 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 317 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 322 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 427 bp overlap

KDM1A 1 dataset

ChIP H1 ENCFF696SGD 423 bp overlap

KDM5B 2 datasets

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 165 bp overlap

ChIP T-47D GSE46055.KDM5B.T-47D 120 bp overlap

KLF13 1 dataset

ChIP K-562 ENCSR608HVP.KLF13.K-562 155 bp overlap

ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 164 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 150 bp overlap

ChIP H1 ENCFF914VQY 284 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 156 bp overlap

ChIP HEK293 GSE76494.MAZ.HEK293 93 bp overlap

ChIP VCaP_R1881 GSE148358.MED1.VCaP_R1881 215 bp overlap

ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 127 bp overlap

ChIP WA01 ENCSR000EBR.MXI1.WA01 122 bp overlap

MYBL1 1 dataset

Motif ES_0h ES_0h-MYBL1_MA0776.1 12 bp overlap

ChIP H1 ENCFF794ZJT 263 bp overlap

NANOG 6 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 198 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 461 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 461 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 461 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 378 bp overlap

ChIP hESC GSE18292.NANOG.hESC 102 bp overlap

NIPBL 2 datasets

ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 356 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 380 bp overlap

ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 340 bp overlap

ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 169 bp overlap

ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 140 bp overlap

ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 221 bp overlap

POLR2A 6 datasets

ChIP GM23338 ENCFF450WCS 380 bp overlap

ChIP GM23338 ENCFF450WCS 180 bp overlap

ChIP body of pancreas ENCFF727UBE 267 bp overlap

ChIP prostate gland ENCFF545MVF 437 bp overlap

ChIP prostate gland ENCFF545MVF 233 bp overlap

ChIP prostate gland ENCFF881OMH 438 bp overlap

POU5F1 7 datasets

ChIP BG03 GSE21614.POU5F1.BG03 230 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 418 bp overlap

ChIP NCCIT GSE36134.POU5F1.NCCIT 316 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 426 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 337 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 348 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 288 bp overlap

RBBP5 1 dataset

ChIP WA01 ENCSR000AQC.RBBP5.WA01 376 bp overlap

ChIP K-562 ENCSR772EEN.RELA.K-562 119 bp overlap

ChIP A-549 ENCSR000BQP.REST.A-549 198 bp overlap

RUNX1 1 dataset

ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 419 bp overlap

RUNX2 1 dataset

ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 185 bp overlap

RXRA 2 datasets

ChIP liver ENCFF077DAP 256 bp overlap

ChIP liver ENCFF807CIA 219 bp overlap

ChIP WA01 GSE104690.RYBP.WA01 336 bp overlap

Motif ES_0h ES_0h-Rarg_MA0860.1 17 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000EBO.SIN3A.WA01 271 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 174 bp overlap

ChIP WTC11 ENCFF891HYW 297 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 419 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 334 bp overlap

SMAD2_3 1 dataset

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 438 bp overlap

SMAD3 3 datasets

ChIP BG03 GSE21614.SMAD3.BG03 266 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 158 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 173 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 298 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 174 bp overlap

SMARCC1 2 datasets

ChIP ESC S25-ESC-d0-BAF155-exp1 307 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 261 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 349 bp overlap

ChIP H1 ENCFF263FUH 249 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 401 bp overlap

ChIP WTC11 ENCFF688PEU 435 bp overlap

ChIP WTC11 ENCFF688PEU 231 bp overlap

ChIP liver ENCFF597LFJ 160 bp overlap

ChIP liver ENCFF769YSM 260 bp overlap

ChIP WA01 ENCSR000BQV.SP4.WA01 141 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

STAT3 1 dataset

ChIP HCC1187 GSE152203.STAT3.HCC1187 403 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 297 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 227 bp overlap

ChIP H1 ENCFF859IIO 344 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 213 bp overlap

ChIP hESC_10h GSE122298.TBP.hESC_10h 186 bp overlap

ChIP hESC_8h GSE122298.TBP.hESC_8h 119 bp overlap

ChIP hiPSC_WTa_RNase-pos GSE128135.TBP.hiPSC_WTa_RNase-pos 218 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 127 bp overlap

ChIP NPC GSE154479.TCF3.NPC 408 bp overlap

TEAD1 1 dataset

Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap

TEAD4 2 datasets

ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 213 bp overlap

ChIP ESC S26-ESC-d0-TEAD4-exp1 274 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 291 bp overlap

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 257 bp overlap

TRIM28 1 dataset

ChIP hESC GSE115387.TRIM28.hESC 208 bp overlap

ChIP ALL GSE145549.YY1.ALL 350 bp overlap

ChIP K-562 ENCSR000BKU.YY1.K-562 240 bp overlap

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 107 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 126 bp overlap

ChIP liver ENCFF400MBC 380 bp overlap

ChIP liver ENCSR994YLZ.YY1.liver 404 bp overlap

YY1AP1 1 dataset

ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 260 bp overlap

ZBTB43 1 dataset

ChIP WTC11 ENCFF058JUB 408 bp overlap

ZBTB7A 1 dataset

ChIP K-562 ENCSR000BME.ZBTB7A.K-562 206 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 112 bp overlap

ZNF148 3 datasets

ChIP K-562 GSE121133.ZNF148.K-562 258 bp overlap

ChIP K-562 ENCSR018MSO.ZNF148.K-562 245 bp overlap

ChIP K562 ENCFF352SDL 461 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 264 bp overlap

ZNF281 1 dataset

ChIP WTC11 ENCFF551GAV 275 bp overlap

ZNF317 2 datasets

ChIP HEK293 GSE76494.ZNF317.HEK293 239 bp overlap

ChIP WTC11 ENCFF537KXI 316 bp overlap

ZNF407 1 dataset

ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 145 bp overlap

ZNF501 1 dataset

ChIP Hep-G2 ENCSR227PHM.ZNF501.Hep-G2 184 bp overlap

ZNF598 1 dataset

ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 233 bp overlap

ZSCAN16 2 datasets

Motif ES_0h ES_0h-ZSCAN16_MA2100.1 18 bp overlap

Motif ES_0h ES_0h-ZSCAN16_MA2100.1 18 bp overlap