chr1 : 232,143,254 232,143,890
636 bp 98 TFs 0 linked genes
This 636 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:232,138,254 – 232,148,890
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
AR 3 datasets
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 179 bp overlap
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 202 bp overlap
ARNTL 4 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 406 bp overlap
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 424 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 406 bp overlap
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 246 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 455 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 532 bp overlap
ATOH8 2 datasets
ChIP A-549 ENCSR161CZA.ATOH8.A-549 636 bp overlap
ChIP A549 ENCFF772HNB 281 bp overlap
BACH1 1 dataset
ChIP A-549 ENCSR043EHG.BACH1.A-549 295 bp overlap
BCL3 1 dataset
ChIP A-549 ENCSR000BQH.BCL3.A-549 69 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
BRD2 10 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 276 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 148 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 310 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 534 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD2.SUM149PT_DMSO 131 bp overlap
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 60 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 449 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 52 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 88 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 376 bp overlap
BRD3 3 datasets
ChIP A-549 GSE119863.BRD3.A-549 636 bp overlap
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 67 bp overlap
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 158 bp overlap
BRD4 18 datasets
ChIP HCC1937 GSE124748.BRD4.HCC1937 321 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 113 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 78 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 636 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 78 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 452 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 452 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 86 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 350 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 631 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 415 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 592 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 59 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 348 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 481 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 493 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 539 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 113 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 54 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 50 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 283 bp overlap
CEBPB 4 datasets
ChIP A-549 ENCSR000BUB.CEBPB.A-549 187 bp overlap
ChIP A549 ENCFF781RLJ 79 bp overlap
ChIP A549 ENCFF797MXZ 139 bp overlap
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 113 bp overlap
CHD1 2 datasets
ChIP H1 ENCFF998XEK 107 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 324 bp overlap
CREB1 3 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 124 bp overlap
ChIP A-549 ENCSR000BRC.CREB1.A-549 141 bp overlap
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 236 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 283 bp overlap
CRY2 1 dataset
ChIP U2OS GSE130602.CRY2.U2OS 533 bp overlap
CTCF 1 dataset
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 406 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 248 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 314 bp overlap
EMX1 1 dataset
ChIP WTC11 ENCFF692RZJ 263 bp overlap
EP300 4 datasets
ChIP A-549 ENCSR000BPW.EP300.A-549 437 bp overlap
ChIP A549 ENCFF960ZEI 69 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 161 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 251 bp overlap
ERG 1 dataset
ChIP WTC11 ENCFF011YUL 281 bp overlap
FOSB 1 dataset
ChIP A549 ENCFF029EEU 341 bp overlap
FOSL1 2 datasets
ChIP BT-549 GSE46166.FOSL1.BT-549 67 bp overlap
ChIP BT-549 GSE112961.FOSL1.BT-549 138 bp overlap
FOSL2 2 datasets
ChIP A-549 ENCSR448TVS.FOSL2.A-549 209 bp overlap
ChIP A-549 ENCSR000BQO.FOSL2.A-549 317 bp overlap
FOXA1 7 datasets
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 108 bp overlap
ChIP A-549 ENCSR000BRD.FOXA1.A-549 253 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 257 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 229 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 108 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 177 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 367 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 171 bp overlap
ChIP DE DE-FOXA2-1 385 bp overlap
ChIP DE DE-FOXA2-2 621 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 529 bp overlap
FOXF2 2 datasets
ChIP A-549 ENCSR445FHB.FOXF2.A-549 536 bp overlap
ChIP A549 ENCFF148XDC 311 bp overlap
GATA3 2 datasets
ChIP A-549 ENCSR000BTI.GATA3.A-549 246 bp overlap
ChIP A549 ENCFF226FVV 133 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 289 bp overlap
ChIP foregut GSE117136.GATA4.foregut 273 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 375 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 258 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-2 275 bp overlap
ChIP foregut GSE117136.GATA6.foregut 312 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 456 bp overlap
HES2 1 dataset
ChIP A549 ENCFF842NHR 145 bp overlap
HIF1A 2 datasets
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 358 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 376 bp overlap
HOXA7 1 dataset
ChIP A549 ENCFF746ZBJ 331 bp overlap
HOXB13 2 datasets
ChIP A-549 ENCSR967ZMR.HOXB13.A-549 520 bp overlap
ChIP A549 ENCFF870NOA 351 bp overlap
HOXB5 2 datasets
ChIP A-549 ENCSR748HJZ.HOXB5.A-549 615 bp overlap
ChIP A549 ENCFF891VDO 345 bp overlap
JUN 3 datasets
ChIP A549 ENCFF191QZG 69 bp overlap
ChIP A549 ENCFF191QZG 272 bp overlap
ChIP BT-549 GSE46166.JUN.BT-549 116 bp overlap
JUNB 2 datasets
ChIP A549 ENCFF251BPG 102 bp overlap
ChIP A549 ENCFF251BPG 304 bp overlap
JUND 3 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 119 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 132 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 164 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 296 bp overlap
ChIP K562 ENCFF455EEO 400 bp overlap
MAFK 2 datasets
ChIP A549 ENCFF371EPR 317 bp overlap
ChIP WA01 ENCSR000EBS.MAFK.WA01 143 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 63 bp overlap
MAX 4 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 275 bp overlap
ChIP A-549 ENCSR000BTJ.MAX.A-549 158 bp overlap
ChIP A549 ENCFF310XGQ 324 bp overlap
ChIP A549 ENCFF310XGQ 525 bp overlap
MED1 2 datasets
ChIP A-549 GSE76893.MED1.A-549 166 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 193 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 531 bp overlap
MYCN 1 dataset
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 124 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 179 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 206 bp overlap
NFATC4 1 dataset
ChIP WTC11 ENCFF744MZI 271 bp overlap
NFE2 2 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 328 bp overlap
ChIP K562 ENCFF047YKA 118 bp overlap
NFE2L1 1 dataset
ChIP WTC11 ENCFF644BPU 165 bp overlap
NFE2L2 8 datasets
ChIP A-549 GSE113497.NFE2L2.A-549 636 bp overlap
ChIP A-549 ENCSR584GHV.NFE2L2.A-549 334 bp overlap
ChIP A549 ENCFF474YMB 265 bp overlap
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 505 bp overlap
ChIP Hep-G2 ENCSR488EES.NFE2L2.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF178DRC 257 bp overlap
ChIP IMR-90 ENCFF059WEE 241 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 190 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 99 bp overlap
NIPBL 1 dataset
ChIP A-549 GSE76893.NIPBL.A-549 165 bp overlap
NR3C1 5 datasets
ChIP A-549 ENCSR000BHF.NR3C1.A-549 124 bp overlap
ChIP A-549 ENCSR000BHG.NR3C1.A-549 117 bp overlap
ChIP A-549 ENCSR000BHE.NR3C1.A-549 115 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 242 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 71 bp overlap
NR5A2 2 datasets
ChIP A-549 ENCSR190GIW.NR5A2.A-549 323 bp overlap
ChIP A549 ENCFF834RVE 471 bp overlap
NRF1 1 dataset
ChIP HeLa-S3 GSE108856.NRF1.HeLa-S3 625 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 592 bp overlap
ChIP A549 ENCFF475JCE 198 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 62 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 130 bp overlap
POLR2A 5 datasets
ChIP H1 ENCFF566JSR 636 bp overlap
ChIP H1 ENCFF566JSR 95 bp overlap
ChIP H1 ENCFF770YBQ 471 bp overlap
ChIP H1 ENCFF833NJP 110 bp overlap
ChIP H1 ENCFF833NJP 465 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 87 bp overlap
PRDM1 3 datasets
ChIP A-549 ENCSR977FEF.PRDM1.A-549 275 bp overlap
ChIP A-549 ENCSR977FEF.PRDM1.A-549 175 bp overlap
ChIP A549 ENCFF012KDW 216 bp overlap
RAD21 2 datasets
ChIP A549 ENCFF047SFC 171 bp overlap
ChIP A549 ENCFF264AHX 282 bp overlap
RARB 1 dataset
ChIP A549 ENCFF837HCQ 102 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 111 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 178 bp overlap
REST 1 dataset
ChIP A-549 ENCSR000BQP.REST.A-549 173 bp overlap
RFX5 1 dataset
ChIP A-549 ENCSR064LJN.RFX5.A-549 85 bp overlap
RUVBL2 2 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 502 bp overlap
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 461 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR513XQX.SIN3A.A-549 117 bp overlap
ChIP A549 ENCFF752ATT 241 bp overlap
SIRT6 1 dataset
ChIP WA01 ENCSR000AUS.SIRT6.WA01 157 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 188 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 96 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 175 bp overlap
SMC1 1 dataset
ChIP MCF-10A GSE101921.SMC1.MCF-10A 283 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 257 bp overlap
SMC3 1 dataset
ChIP A549 ENCFF079FKB 247 bp overlap
SP1 1 dataset
ChIP A-549 ENCSR000BPE.SP1.A-549 395 bp overlap
SP4 2 datasets
ChIP WA01 ENCSR000BQV.SP4.WA01 110 bp overlap
ChIP WA01 ENCSR000BQV.SP4.WA01 221 bp overlap
STAT3 4 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 308 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 106 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 67 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 198 bp overlap
TAF7 1 dataset
ChIP WA01 ENCSR000BLU.TAF7.WA01 128 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 443 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 185 bp overlap
TP63 2 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 77 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 54 bp overlap
UBN1 1 dataset
ChIP HeLa GSE45024.UBN1.HeLa 199 bp overlap
WDR5 2 datasets
ChIP breast-cancer_shLuc GSE113279.WDR5.breast-cancer_shLuc 328 bp overlap
ChIP breast-cancer_shWDR5 GSE113279.WDR5.breast-cancer_shWDR5 215 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 387 bp overlap
ZFX 3 datasets
ChIP HCT-116 ENCSR503GVO.ZFX.HCT-116 323 bp overlap
ChIP HCT-116 GSE102616.ZFX.HCT-116 322 bp overlap
ChIP HCT116 ENCFF324IZY 512 bp overlap
ZMYND8 1 dataset
ChIP MDA-MB-231 GSE108833.ZMYND8.MDA-MB-231 99 bp overlap
ZNF302 1 dataset
ChIP A549 ENCFF333REI 305 bp overlap
ZNF335 3 datasets
ChIP HEK293 ENCFF784SLD 419 bp overlap
ChIP HEK293 ENCFF784SLD 196 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 210 bp overlap
ZNF416 1 dataset
ChIP WTC11 ENCFF407TAZ 271 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 285 bp overlap
ZNF624 2 datasets
ChIP A-549 ENCSR419VVI.ZNF624.A-549 603 bp overlap
ChIP A549 ENCFF802OXN 297 bp overlap
ZNF671 1 dataset
ChIP WTC11 ENCFF053HBV 265 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 522 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 81 bp overlap
ZSCAN20 1 dataset
ChIP A549 ENCFF611TGC 285 bp overlap