chr1 : 201,676,091 201,676,566
475 bp 95 TFs 0 linked genes
This 475 bp open chromatin element has no linked target genes and is bound by 95 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:201,671,091 – 201,681,566
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
95 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP K-562 ENCSR241LIH.AFF1.K-562 336 bp overlap
ChIP K562 ENCFF096RYC 347 bp overlap
AR 2 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 153 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 167 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 297 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 371 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 237 bp overlap
BRD2 8 datasets
ChIP K-562 GSE140325.BRD2.K-562 107 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD2.K-562_DMSO-IFNG 229 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD2.K-562_iBET-IFNG 204 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 167 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 475 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 204 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 467 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 395 bp overlap
BRD3 1 dataset
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 141 bp overlap
BRD4 7 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 347 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 255 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 278 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 475 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 172 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 216 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 322 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 143 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 141 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 338 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 166 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 165 bp overlap
CHD4 1 dataset
ChIP RH5 GSE155861.CHD4.RH5 366 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 146 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 303 bp overlap
CTCF 1 dataset
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 89 bp overlap
ELF1 2 datasets
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 219 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 113 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 475 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 414 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 475 bp overlap
ELL2 1 dataset
ChIP HeLa GSE40632.ELL2.HeLa 177 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 134 bp overlap
ChIP AML GSE131939.EP300.AML 58 bp overlap
ERG 3 datasets
ChIP SKNO-1 GSE23730.ERG.SKNO-1 222 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 428 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 312 bp overlap
ESR1 4 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 395 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 416 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 201 bp overlap
ETS1 2 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 185 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 183 bp overlap
ETV1 1 dataset
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 270 bp overlap
EZH2 2 datasets
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 63 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 375 bp overlap
FLI1 2 datasets
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 279 bp overlap
ChIP UAE GSE23730.FLI1.UAE 109 bp overlap
FOS 1 dataset
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 69 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 84 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 115 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 198 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 194 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 475 bp overlap
GLIS2 1 dataset
ChIP HCT-116_5FU GSE125927.GLIS2.HCT-116_5FU 252 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 475 bp overlap
HDAC2 2 datasets
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 236 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 209 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 272 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 213 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 229 bp overlap
JUN 2 datasets
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 281 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 144 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 125 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 209 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 475 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 378 bp overlap
KMT2A 3 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 159 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 155 bp overlap
ChIP THP-1 GSE83671.KMT2A.THP-1 192 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 368 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 475 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 223 bp overlap
MAX 2 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 119 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 95 bp overlap
MAZ 2 datasets
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 146 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 220 bp overlap
MED1 3 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 246 bp overlap
ChIP HCT-116_thaps GSE121798.MED1.HCT-116_thaps 388 bp overlap
ChIP RH4 GSE83726.MED1.RH4 237 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 201 bp overlap
MYOD1 4 datasets
ChIP RD GSE137168.MYOD1.RD 365 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 410 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 257 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 186 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 357 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 183 bp overlap
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 124 bp overlap
NELFE 3 datasets
ChIP HeLa GSE125534.NELFE.HeLa 135 bp overlap
ChIP K-562_HS GSE112379.NELFE.K-562_HS 120 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 141 bp overlap
NFIC 3 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 216 bp overlap
ChIP SK-N-SH ENCFF965AKM 187 bp overlap
ChIP SK-N-SH ENCFF965AKM 357 bp overlap
POLR2A 1 dataset
ChIP spleen ENCFF446ZGT 224 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 421 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 152 bp overlap
RAD21 2 datasets
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 128 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 351 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 197 bp overlap
RBBP5 3 datasets
ChIP K-562 ENCSR000AQI.RBBP5.K-562 152 bp overlap
ChIP K562 ENCFF070CVK 475 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 163 bp overlap
RBPJ 4 datasets
ChIP GSC8-11 GSE74557.RBPJ.GSC8-11 210 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 175 bp overlap
ChIP HCC1599 GSE116871.RBPJ.HCC1599 313 bp overlap
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 316 bp overlap
RELA 1 dataset
ChIP HUVEC-C_TNF-60min GSE121890.RELA.HUVEC-C_TNF-60min 146 bp overlap
RUNX1 4 datasets
ChIP MV4-11 GSE79899.RUNX1.MV4-11 198 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 209 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 214 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 163 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 173 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 53 bp overlap
SIN3A 2 datasets
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 119 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 120 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 246 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 246 bp overlap
SMARCA2 4 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 157 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 145 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 249 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 92 bp overlap
SMARCA4 10 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 237 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 336 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 297 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 358 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 345 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 197 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 355 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 449 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 475 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 292 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 466 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 204 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 201 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 303 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 281 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 191 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 191 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 191 bp overlap
SSRP1 1 dataset
ChIP hiF-T GSE98758.SSRP1.hiF-T 122 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 232 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 262 bp overlap
ChIP SK-N-SH ENCFF147AHB 210 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 365 bp overlap
TP53 1 dataset
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 109 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 125 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 187 bp overlap
WT1 3 datasets
ChIP HEK293 ENCFF906HIR 352 bp overlap
ChIP HEK293 ENCFF906HIR 348 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 416 bp overlap
ZBTB1 1 dataset
ChIP K562 ENCFF038CML 458 bp overlap
ZBTB17 2 datasets
ChIP HEK293 ENCFF865LIO 475 bp overlap
ChIP HEK293 ENCFF865LIO 327 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 254 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 341 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 143 bp overlap
ZFX 2 datasets
ChIP K-562 ENCSR920ASP.ZFX.K-562 258 bp overlap
ChIP K562 ENCFF169LZT 469 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 68 bp overlap
ZNF263 2 datasets
ChIP HEK293 ENCFF336CWQ 430 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 401 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 403 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 193 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 210 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 281 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 158 bp overlap