chr1 : 164,651,317 164,651,635
318 bp 116 TFs 0 linked genes
This 318 bp open chromatin element has no linked target genes and is bound by 116 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:164,646,317 – 164,656,635
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
116 transcription factors
Source
Cell type
BRD3 2 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 99 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 200 bp overlap
BRD4 17 datasets
ChIP 402-91 GSE111253.BRD4.402-91 224 bp overlap
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 94 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 318 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 161 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 250 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 78 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 205 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 142 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 57 bp overlap
ChIP MV4-11_IBET_SGC GSE71776.BRD4.MV4-11_IBET_SGC 64 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 194 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 105 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 69 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 76 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 189 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 318 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 253 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 220 bp overlap
CBX3 1 dataset
ChIP HCT116 ENCFF947BOL 72 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 77 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 90 bp overlap
CHD2 3 datasets
ChIP HeLa-S3 ENCFF078QRQ 308 bp overlap
ChIP HeLa-S3 ENCFF078QRQ 64 bp overlap
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 111 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 97 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 126 bp overlap
CTCF 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 275 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 66 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 217 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 141 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 148 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 318 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 207 bp overlap
EP300 4 datasets
ChIP HeLa-S3 ENCFF089VPQ 54 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 306 bp overlap
ChIP neural cell ENCFF442QNK 193 bp overlap
ChIP tibial nerve ENCFF346AYA 126 bp overlap
ESR1 3 datasets
ChIP Ishikawa_E2_D538G GSE132426.ESR1.Ishikawa_E2_D538G 71 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 309 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 81 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 155 bp overlap
FOS 2 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 292 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 105 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 76 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 81 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 134 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 255 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 100 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 215 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 95 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 157 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 116 bp overlap
FOXL2 2 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 153 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 158 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 93 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 89 bp overlap
HNF4A 5 datasets
ChIP GP5D GSE51234.HNF4A.GP5D 170 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 295 bp overlap
ChIP KATO-III GSE114018.HNF4A.KATO-III 105 bp overlap
ChIP LoVo_PHASES GSE51290.HNF4A.LoVo_PHASES 157 bp overlap
ChIP liver ENCFF449HPV 52 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 295 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 235 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 220 bp overlap
IRF1 5 datasets
ChIP AsPC-1 GSE141606.IRF1.AsPC-1 139 bp overlap
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 202 bp overlap
ChIP AsPC-1_ZBED2-cDNA GSE141606.IRF1.AsPC-1_ZBED2-cDNA 164 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 210 bp overlap
ChIP PDAC GSE64557.IRF1.PDAC 250 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 81 bp overlap
IRF4 2 datasets
ChIP BC-3 GSE132777.IRF4.BC-3 203 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 211 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 184 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 210 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 174 bp overlap
JUNB 2 datasets
ChIP A549 ENCFF251BPG 132 bp overlap
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 318 bp overlap
JUND 1 dataset
ChIP HeLa-S3 ENCFF642OHL 50 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 66 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 82 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 243 bp overlap
KLF4 3 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 68 bp overlap
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 131 bp overlap
ChIP PDAC GSE64557.KLF4.PDAC 317 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 256 bp overlap
KMT2A 2 datasets
ChIP IMS-M2_DMSO GSE129636.KMT2A.IMS-M2_DMSO 186 bp overlap
ChIP OCI-AML-3_VTP GSE129636.KMT2A.OCI-AML-3_VTP 158 bp overlap
MAX 1 dataset
ChIP MCF-7 ENCFF169IXS 60 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 98 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 318 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 204 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 53 bp overlap
MGA 1 dataset
ChIP A-549_MGA-OE GSE112188.MGA.A-549_MGA-OE 104 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 134 bp overlap
MXI1 2 datasets
ChIP neural ENCSR934NHU.MXI1.neural 232 bp overlap
ChIP neural cell ENCFF623HQN 184 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCFF448AMU 55 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 99 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 183 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 182 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 318 bp overlap
NR1H2 1 dataset
ChIP HT29_GW3965_48H GSE77039.NR1H2.HT29_GW3965_48H 88 bp overlap
NR2F1 2 datasets
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 107 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 119 bp overlap
NR2F2 1 dataset
ChIP K562 ENCFF004YPK 73 bp overlap
NR2F6 1 dataset
ChIP K562 ENCFF674RQA 83 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 172 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 76 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 166 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 145 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 281 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 318 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 79 bp overlap
POLR2A 6 datasets
ChIP adrenal gland ENCFF843OBJ 171 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 96 bp overlap
ChIP neural cell ENCFF604SPB 214 bp overlap
ChIP sigmoid colon ENCFF725QFT 118 bp overlap
ChIP sigmoid colon ENCFF748YVT 256 bp overlap
ChIP sigmoid colon ENCFF754JQR 197 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 137 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 157 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 234 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 51 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 308 bp overlap
PRDM1 3 datasets
ChIP HEK293 ENCFF302TBP 139 bp overlap
ChIP HeLa-S3 ENCFF893HDJ 230 bp overlap
ChIP U266B1 GSE102360.PRDM1.U266B1 229 bp overlap
RAD21 3 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 318 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 270 bp overlap
ChIP neural cell ENCFF564MOT 72 bp overlap
RUNX1 1 dataset
ChIP MV4-11 GSE79899.RUNX1.MV4-11 157 bp overlap
SIN3A 1 dataset
ChIP A-549 ENCSR513XQX.SIN3A.A-549 178 bp overlap
SIX2 1 dataset
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 152 bp overlap
SMARCA4 3 datasets
ChIP HeLa-S3 ENCFF590FML 151 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 318 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 182 bp overlap
SMARCC1 1 dataset
ChIP HeLa-S3 ENCFF971JGA 209 bp overlap
SMARCC2 1 dataset
ChIP HeLa-S3 ENCFF313RPK 177 bp overlap
SMC3 2 datasets
ChIP GP5D GSE51234.SMC3.GP5D 184 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 260 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 103 bp overlap
SP2 1 dataset
ChIP HEK293 GSE76494.SP2.HEK293 129 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 240 bp overlap
STAT3 1 dataset
ChIP HeLa-S3 ENCFF655DGU 50 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_Nut3 GSE138548.SUPT5H.HCT-116_Nut3 148 bp overlap
SUZ12 1 dataset
ChIP HEK293T_PCGF135fl_OHT GSE119618.SUZ12.HEK293T_PCGF135fl_OHT 228 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 223 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 273 bp overlap
ChIP HeLa-S3 ENCFF673QAB 54 bp overlap
TP53 1 dataset
ChIP Calu-1_MUT8-COMB GSE128673.TP53.Calu-1_MUT8-COMB 172 bp overlap
TRIM28 5 datasets
ChIP HEK293 ENCFF265CEM 235 bp overlap
ChIP HEK293 ENCFF582MWI 224 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 156 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 147 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 147 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCSR217WRC.TSHZ1.HEK293 113 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 77 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 174 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 176 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 68 bp overlap
ChIP WA01 GSE39096.YY1.WA01 150 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 201 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 85 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 194 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 97 bp overlap
ZNF10 2 datasets
ChIP HEK293 ENCFF611ZJI 201 bp overlap
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 168 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 200 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 152 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 104 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 233 bp overlap
ZNF2 2 datasets
ChIP HEK293 ENCFF641ICT 222 bp overlap
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 221 bp overlap
ZNF202 1 dataset
ChIP HEK293 ENCFF574FZA 299 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 227 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 124 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 318 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 318 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 207 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 139 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 133 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 210 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 131 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 246 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 154 bp overlap
ZNF468 1 dataset
ChIP HEK293T GSE78099.ZNF468.HEK293T 318 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 103 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 51 bp overlap
ZNF561 1 dataset
ChIP HEK293 ENCFF399XKF 231 bp overlap
ZNF600 2 datasets
ChIP HEK293 ENCFF785JSX 282 bp overlap
ChIP HEK293 ENCFF785JSX 201 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 230 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 214 bp overlap