chr7 : 95,476,255 95,476,809
554 bp 121 TFs 0 linked genes
This 554 bp open chromatin element has no linked target genes and is bound by 121 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:95,471,255 – 95,481,809
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
121 transcription factors
Source
Cell type
AR 1 dataset
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 335 bp overlap
ARNTL 2 datasets
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
ChIP U2OS_DMSO GSE85096.ARNTL.U2OS_DMSO 248 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Atoh1 1 dataset
Motif DE_12h DE_12h-Atoh1_MA1467.3 7 bp overlap
BRD2 3 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 235 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 53 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 244 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 254 bp overlap
BRD4 10 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 347 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 219 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 491 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 554 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 431 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 269 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 75 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 248 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 90 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 100 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 484 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 201 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 554 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 191 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 153 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 453 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 453 bp overlap
CTCF 16 datasets
ChIP B-cell ENCSR000AUV.CTCF.B-cell 234 bp overlap
ChIP C4-2B ENCFF821XVN 181 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 109 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 150 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 120 bp overlap
ChIP Panc1 ENCFF056JQX 71 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 113 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 264 bp overlap
ChIP RWPE2 ENCFF911IEE 50 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 105 bp overlap
ChIP brain ENCFF163BBN 58 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 128 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 84 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 334 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 119 bp overlap
EBF1 2 datasets
ChIP GM12878 ENCFF167CZS 285 bp overlap
ChIP GM12878 ENCFF167CZS 79 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 81 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
EP300 1 dataset
ChIP A-549 ENCSR000BPW.EP300.A-549 321 bp overlap
FOXA1 2 datasets
ChIP LNCaP GSE64656.FOXA1.LNCaP 105 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 370 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 326 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 337 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 141 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 457 bp overlap
HOXB13 1 dataset
ChIP A549 ENCFF870NOA 162 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 400 bp overlap
ChIP GM12878 ENCFF824TGK 470 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
IRF3 2 datasets
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
ChIP SK-N-SH ENCFF921DIM 167 bp overlap
JUN 1 dataset
ChIP A549 ENCFF191QZG 463 bp overlap
KLF1 1 dataset
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF2 1 dataset
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
Motif DE_12h DE_12h-KLF6_MA1517.2 9 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 2 datasets
ChIP A549 ENCFF310XGQ 405 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 219 bp overlap
MED1 3 datasets
ChIP A-549 GSE76893.MED1.A-549 99 bp overlap
ChIP RH4 GSE83726.MED1.RH4 95 bp overlap
ChIP RH4 GSE83726.MED1.RH4 327 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 231 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MLLT1 2 datasets
ChIP GM12878 ENCFF995GXC 218 bp overlap
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 293 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 440 bp overlap
MYCN 2 datasets
ChIP Kelly GSE94822.MYCN.Kelly 100 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 448 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 212 bp overlap
MYOD1 7 datasets
ChIP RD GSE137168.MYOD1.RD 518 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 265 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 554 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 480 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 240 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 235 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 214 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 526 bp overlap
Mecom 2 datasets
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 171 bp overlap
NIPBL 1 dataset
ChIP A-549 GSE76893.NIPBL.A-549 174 bp overlap
NOTCH1 2 datasets
ChIP GSC8-11_12d-das GSE74557.NOTCH1.GSC8-11_12d-das 166 bp overlap
ChIP GSC8-11_dasatinib GSE74557.NOTCH1.GSC8-11_dasatinib 238 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Nr5A2 1 dataset
Motif DE_12h DE_12h-Nr5A2_MA0505.3 9 bp overlap
OSR1 1 dataset
Motif DE_12h DE_12h-OSR1_MA1542.2 8 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PAX3 1 dataset
Motif DE_12h DE_12h-PAX3_MA1546.2 14 bp overlap
PAX3-FOXO1 3 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 177 bp overlap
ChIP RH3 GSE83726.PAX3-FOXO1.RH3 266 bp overlap
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 220 bp overlap
PBX1 2 datasets
ChIP A-549 ENCSR637RKG.PBX1.A-549 240 bp overlap
ChIP A549 ENCFF475JCE 351 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 94 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 85 bp overlap
PKNOX1 3 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
ChIP GM12878 ENCFF589FCY 363 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 253 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 69 bp overlap
Ptf1A 1 dataset
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
RAD21 7 datasets
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 85 bp overlap
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 139 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 168 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 458 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 451 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 208 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 352 bp overlap
RAD51 1 dataset
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 157 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 230 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 554 bp overlap
RBPJ 6 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 222 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 241 bp overlap
ChIP MDA-MB-157 GSE116868.RBPJ.MDA-MB-157 233 bp overlap
ChIP NHEK GSE29498.RBPJ.NHEK 309 bp overlap
RELA 1 dataset
ChIP HeLa-B2_P65KD_DMSO GSE24518.RELA.HeLa-B2_P65KD_DMSO 86 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 406 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 301 bp overlap
ChIP neural cell ENCFF882LXX 355 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 93 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 87 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 71 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 201 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 231 bp overlap
SMARCA4 7 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 172 bp overlap
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 292 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 206 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 84 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 113 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 326 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 191 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 54 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 554 bp overlap
SMC3 4 datasets
ChIP HeLa GSE126990.SMC3.HeLa 279 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 279 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 279 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 330 bp overlap
SND1 1 dataset
ChIP NHEK GSE29498.SND1.NHEK 273 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 397 bp overlap
SOX21 1 dataset
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
SOX8 1 dataset
Motif DE_12h DE_12h-SOX8_MA0868.3 7 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 77 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 77 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 270 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 167 bp overlap
Sox1 1 dataset
Motif DE_12h DE_12h-Sox1_MA0870.1 15 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX21 3 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCFF951HUW 213 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 368 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TCF12 2 datasets
ChIP A-549 ENCSR000BQQ.TCF12.A-549 92 bp overlap
ChIP A-549 ENCSR000BQQ.TCF12.A-549 136 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TFAP2A 1 dataset
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
TFAP2B 2 datasets
Motif DE_12h DE_12h-TFAP2B_MA0812.2 9 bp overlap
ChIP SK-N-SH ENCFF869XXQ 441 bp overlap
TFAP2C 3 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 364 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 220 bp overlap
TFAP2E 1 dataset
Motif DE_12h DE_12h-TFAP2E_MA1569.2 9 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 138 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 95 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap