chr7 : 94,392,127 94,392,356
229 bp 84 TFs 2 linked genes
This 229 bp open chromatin element is linked to COL1A2 and ENSG00000285090 and is bound by 84 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
COL1A2 2.5 kb Proximal Proximity
ENSG00000285090 3.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:94,387,127 – 94,397,356
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 229 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 229 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 102 bp overlap
ATF6 1 dataset
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 229 bp overlap
BCL6 1 dataset
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 159 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 203 bp overlap
BRD4 11 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 188 bp overlap
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 229 bp overlap
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 154 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 229 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 166 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 229 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 103 bp overlap
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 90 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 229 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 229 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 229 bp overlap
BRD7 1 dataset
ChIP SUM159PT_JQ1 GSE131097.BRD7.SUM159PT_JQ1 125 bp overlap
CASZ1 2 datasets
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 212 bp overlap
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 212 bp overlap
CDK8 4 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 206 bp overlap
ChIP leiomyoma_PT967 GSE128230.CDK8.leiomyoma_PT967 91 bp overlap
ChIP myometrium_PT886 GSE128230.CDK8.myometrium_PT886 143 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 75 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 216 bp overlap
CHD7 3 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 132 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 194 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 229 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
CREB3L4 1 dataset
Motif DE_12h DE_12h-CREB3L4_MA1474.2 10 bp overlap
CTCF 5 datasets
ChIP RH4 GSE83726.CTCF.RH4 177 bp overlap
ChIP chondrocyte ENCFF134ORZ 229 bp overlap
ChIP chondrocyte ENCFF134ORZ 229 bp overlap
ChIP gastroesophageal-sphincter ENCSR146BGM.CTCF.gastroesophageal-sphincter 134 bp overlap
ChIP right atrium auricular region ENCFF690LBT 57 bp overlap
E2F7 1 dataset
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
EP300 5 datasets
ChIP SK-N-SH ENCFF451CNG 229 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 229 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 185 bp overlap
ChIP gastroesophageal sphincter ENCFF211FPL 216 bp overlap
ChIP tibial nerve ENCFF346AYA 229 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_1H GSE41166.ETS1.HUVEC-C_VEGF_1H 173 bp overlap
EZH2 2 datasets
ChIP DND41 ENCSR000ASW.EZH2.DND41 186 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 229 bp overlap
FOS 3 datasets
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 146 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 86 bp overlap
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 115 bp overlap
FOSL2 3 datasets
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 229 bp overlap
ChIP SK-N-SH ENCFF127ZDW 229 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 144 bp overlap
FOXM1 1 dataset
ChIP SK-N-SH ENCSR000BTB.FOXM1.SK-N-SH 226 bp overlap
GATA2 3 datasets
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 187 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 155 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 168 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 202 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-2 134 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 209 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 96 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 229 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 229 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 229 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 200 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 203 bp overlap
IRF1 5 datasets
ChIP AsPC-1_IFNg GSE141606.IRF1.AsPC-1_IFNg 139 bp overlap
ChIP K-562 ENCSR854MCV.IRF1.K-562 229 bp overlap
ChIP K-562 ENCSR000EGL.IRF1.K-562 135 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 146 bp overlap
ChIP K562 ENCFF277KTJ 229 bp overlap
IRF2 3 datasets
ChIP K-562 ENCSR376WCJ.IRF2.K-562 158 bp overlap
ChIP K562 ENCFF248LJZ 209 bp overlap
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 192 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 229 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 229 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 229 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 229 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 229 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 229 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 229 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 229 bp overlap
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 70 bp overlap
ChIP myometrium_PT886 GSE128230.JUN.myometrium_PT886 84 bp overlap
JUND 3 datasets
ChIP SK-N-SH ENCFF551NEQ 178 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 229 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 135 bp overlap
MAF 1 dataset
ChIP lymphocyte_Th17_IL10+_Day5 GSE101389.MAF.lymphocyte_Th17_IL10+_Day5 218 bp overlap
MAFF 1 dataset
Motif DE_12h DE_12h-MAFF_MA0495.4 11 bp overlap
MAFK 1 dataset
ChIP IMR-90 ENCFF336DHZ 75 bp overlap
MAX 2 datasets
ChIP SK-N-SH ENCFF285LXR 229 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 200 bp overlap
MAZ 2 datasets
ChIP IMR-90 ENCFF682IKN 229 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 158 bp overlap
MED1 11 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 229 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 229 bp overlap
ChIP hMSC-TERT4_D0 GSE104537.MED1.hMSC-TERT4_D0 229 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 229 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 229 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 229 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 209 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 229 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 229 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 229 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 229 bp overlap
MED12 3 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 174 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 124 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 144 bp overlap
MYOD1 3 datasets
ChIP RD GSE137168.MYOD1.RD 197 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 181 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 198 bp overlap
Mafb 1 dataset
Motif DE_12h DE_12h-Mafb_MA0117.3 11 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 229 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 168 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 209 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 145 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 190 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 229 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 229 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR168SMX.NR2F2.liver 209 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 229 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 229 bp overlap
ChIP IMR-90 ERP007093.NR3C1.IMR-90 141 bp overlap
NRL 1 dataset
Motif DE_12h DE_12h-NRL_MA0842.3 12 bp overlap
PBX3 2 datasets
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 95 bp overlap
ChIP SK-N-SH ENCFF876BMC 228 bp overlap
POLR2A 14 datasets
ChIP GM19099 ENCFF726IBN 229 bp overlap
ChIP H54 ENCFF398BXN 229 bp overlap
ChIP IMR-90 ENCFF672YWV 228 bp overlap
ChIP adrenal gland ENCFF843OBJ 229 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 176 bp overlap
ChIP gastroesophageal sphincter ENCFF070PCA 177 bp overlap
ChIP gastroesophageal sphincter ENCFF826EZZ 229 bp overlap
ChIP sigmoid colon ENCFF653CQA 229 bp overlap
ChIP sigmoid colon ENCFF748YVT 229 bp overlap
ChIP sigmoid colon ENCFF754JQR 214 bp overlap
ChIP stomach ENCFF278MYS 215 bp overlap
ChIP stomach ENCFF820WZN 229 bp overlap
ChIP transverse colon ENCFF840PXT 229 bp overlap
ChIP uterus ENCFF566ZPY 229 bp overlap
RAD21 8 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 106 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 229 bp overlap
ChIP IMR-90 ENCFF752PTH 229 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 229 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 214 bp overlap
ChIP SK-N-SH ENCFF747MAS 229 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 136 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 225 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 102 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 142 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 151 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 229 bp overlap
SIN3A 2 datasets
ChIP SK-N-SH ENCFF931NFD 229 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 162 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 229 bp overlap
SMAD3 2 datasets
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 210 bp overlap
ChIP breast-cancer_triple-negative GSE130364.SMAD3.breast-cancer_triple-negative 229 bp overlap
SMARCA2 4 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 121 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 112 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 229 bp overlap
ChIP NPC_R1159Q_ab GSE122631.SMARCA2.NPC_R1159Q_ab 93 bp overlap
SMARCA4 13 datasets
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 229 bp overlap
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 97 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 221 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 229 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 229 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 229 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 229 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 229 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 229 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 229 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 229 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 229 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 223 bp overlap
SMARCC1 6 datasets
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 214 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 228 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 229 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 229 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 229 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 229 bp overlap
SMC3 4 datasets
ChIP IMR-90 ENCFF627LON 192 bp overlap
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 206 bp overlap
ChIP SK-N-SH ENCFF791WFB 219 bp overlap
ChIP SK-N-SH ENCSR000EHW.SMC3.SK-N-SH 114 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 150 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAT2 1 dataset
ChIP K-562 ENCSR000FBC.STAT2.K-562 145 bp overlap
STAT3 4 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 127 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 229 bp overlap
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 153 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 229 bp overlap
TAF1 4 datasets
ChIP PFSK-1 ENCFF982LZL 229 bp overlap
ChIP PFSK-1 ENCFF982LZL 108 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 229 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 191 bp overlap
TBP 1 dataset
ChIP hESC_10h GSE122298.TBP.hESC_10h 123 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 161 bp overlap
TEAD1 2 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 183 bp overlap
ChIP adipocyte GSE140782.TEAD1.adipocyte 229 bp overlap
TEAD4 6 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 187 bp overlap
ChIP H1 ENCFF778PAX 204 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 119 bp overlap
ChIP SK-N-SH ENCFF754TJT 229 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 207 bp overlap
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 197 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 162 bp overlap
XBP1 1 dataset
Motif DE_12h DE_12h-XBP1_MA0844.2 11 bp overlap
YY1 2 datasets
ChIP SK-N-SH ENCSR000BSM.YY1.SK-N-SH 154 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 181 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap