chr1 : 112,872,534 – 112,873,042
508 bp 98 TFs 0 linked genes
This 508 bp open chromatin element has no linked target genes and is bound by 98 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:112,867,534 – 112,878,042
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 169 bp overlap
AFF1 1 dataset
ChIP K562 ENCFF583EEH 300 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 307 bp overlap
ChIP K562 ENCFF938UXQ 164 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 378 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 190 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 508 bp overlap
BRD2 5 datasets
ChIP K-562 GSE140325.BRD2.K-562 76 bp overlap
ChIP THP-1_DMSO GSE138084.BRD2.THP-1_DMSO 508 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 306 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 468 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 481 bp overlap
BRD3 4 datasets
ChIP H-1_DE GSE126661.BRD3.H-1_DE 371 bp overlap
ChIP HEK293T GSE39579.BRD3.HEK293T 168 bp overlap
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 277 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 313 bp overlap
BRD4 11 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 114 bp overlap
ChIP CHL-1 GSE95585.BRD4.CHL-1 185 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 190 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 200 bp overlap
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 233 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 179 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 352 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 508 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 506 bp overlap
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 402 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 508 bp overlap
CBFA2T3 1 dataset
ChIP K562 ENCFF673OEZ 372 bp overlap
CCNT2 2 datasets
ChIP K-562 ENCSR000DOA.CCNT2.K-562 200 bp overlap
ChIP K562 ENCFF199GSZ 425 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 100 bp overlap
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 103 bp overlap
CDX2 3 datasets
ChIP LS180 GSE31939.CDX2.LS180 168 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 177 bp overlap
ChIP LS180_125 GSE31939.CDX2.LS180_125 210 bp overlap
CHAMP1 1 dataset
ChIP K562 ENCFF860ZIW 446 bp overlap
CHD4 2 datasets
ChIP 501-mel GSE134848.CHD4.501-mel 164 bp overlap
ChIP K562 ENCFF933NKI 248 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 323 bp overlap
ChIP K562 ENCFF403WPG 477 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 242 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 138 bp overlap
EHMT2 1 dataset
ChIP K562 ENCFF053BWO 363 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 230 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 143 bp overlap
ERG 1 dataset
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 184 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 93 bp overlap
FOS 3 datasets
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 71 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 74 bp overlap
ChIP myometrium_PT967 GSE128230.FOS.myometrium_PT967 89 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 508 bp overlap
ChIP DE DE-FOXA2-2 493 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 224 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 221 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 226 bp overlap
GATA2 3 datasets
ChIP TF1 GSE73207.GATA2.TF1 174 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 209 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 368 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 404 bp overlap
ChIP DE DE-GATA4-2 508 bp overlap
ChIP foregut GSE117136.GATA4.foregut 311 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 393 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 237 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 215 bp overlap
ChIP DE DE-GATA6-1 508 bp overlap
ChIP DE DE-GATA6-2 508 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 508 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 508 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 508 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 508 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 508 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 230 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 451 bp overlap
ChIP foregut GSE117136.GATA6.foregut 411 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 340 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 451 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 368 bp overlap
GATAD2A 1 dataset
ChIP K562 ENCFF071LJW 345 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 508 bp overlap
ChIP K562 ENCFF928TKZ 439 bp overlap
HDAC2 1 dataset
ChIP K-562 GSE140325.HDAC2.K-562 92 bp overlap
HOXB8 1 dataset
ChIP PANC-1 GSE119930.HOXB8.PANC-1 299 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 508 bp overlap
ChIP K562 ENCFF348IBL 508 bp overlap
ChIP K562 ENCFF771OHZ 379 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 103 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 400 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 508 bp overlap
IRF2 1 dataset
ChIP K562 ENCFF248LJZ 345 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 328 bp overlap
JUND 2 datasets
ChIP K-562 ENCSR000EGN.JUND.K-562 217 bp overlap
ChIP K562 ENCFF336RCR 413 bp overlap
KDM1A 2 datasets
ChIP K562 ENCFF934ZRG 420 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 508 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 156 bp overlap
MAZ 7 datasets
ChIP HEK293 GSE76494.MAZ.HEK293 111 bp overlap
ChIP K-562 ENCSR163IUV.MAZ.K-562 288 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 181 bp overlap
ChIP K562 ENCFF333ZIV 371 bp overlap
ChIP K562 ENCFF333ZIV 174 bp overlap
ChIP K562 ENCFF809XHP 455 bp overlap
ChIP K562 ENCFF809XHP 249 bp overlap
MBD3 1 dataset
ChIP HEK293T GSE102945.MBD3.HEK293T 329 bp overlap
MED1 1 dataset
ChIP SGBS GSE64233.MED1.SGBS 164 bp overlap
MED12 5 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 323 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 89 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 135 bp overlap
ChIP myometrium_PT1063 GSE128230.MED12.myometrium_PT1063 68 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 60 bp overlap
MTA1 2 datasets
ChIP K562 ENCFF230ZKA 428 bp overlap
ChIP K562 ENCFF230ZKA 222 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 497 bp overlap
ChIP K562 ENCFF289UFB 345 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 302 bp overlap
NELFE 1 dataset
ChIP HeLa GSE125534.NELFE.HeLa 173 bp overlap
NR2C2 1 dataset
ChIP K562 ENCFF750AXF 55 bp overlap
NR3C1 1 dataset
ChIP HCC1937 GSE152203.NR3C1.HCC1937 174 bp overlap
OSR2 2 datasets
ChIP HEK293 GSE76494.OSR2.HEK293 165 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 205 bp overlap
PGR 5 datasets
ChIP endometrium_Midsecretory GSE132712.PGR.endometrium_Midsecretory 260 bp overlap
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 381 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 508 bp overlap
ChIP myometrium_TP1 GSE137550.PGR.myometrium_TP1 478 bp overlap
ChIP myometrium_TP2 GSE137550.PGR.myometrium_TP2 383 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 219 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 121 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 295 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 338 bp overlap
PRDM1 1 dataset
ChIP HEK293 GSE76494.PRDM1.HEK293 301 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 248 bp overlap
ChIP K562 ENCFF740YLK 340 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 288 bp overlap
RAD21 3 datasets
ChIP GP5D GSE51234.RAD21.GP5D 208 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 492 bp overlap
ChIP K562 ENCFF634XYR 277 bp overlap
RBBP5 2 datasets
ChIP K-562 ENCSR000AQI.RBBP5.K-562 188 bp overlap
ChIP K562 ENCFF070CVK 456 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 297 bp overlap
REST 3 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 190 bp overlap
ChIP K-562 GSE70482.REST.K-562 64 bp overlap
ChIP K562 ENCFF430APM 231 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 275 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 112 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 318 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 290 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 316 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 292 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 215 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 331 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 364 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 123 bp overlap
SMARCA4 2 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 344 bp overlap
ChIP K562 ENCFF506JCB 429 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 151 bp overlap
SMARCE1 3 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 352 bp overlap
ChIP K562 ENCFF690CFF 278 bp overlap
ChIP K562 ENCFF690CFF 78 bp overlap
SMC3 3 datasets
ChIP HeLa GSE126990.SMC3.HeLa 152 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 152 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 152 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 262 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 291 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 250 bp overlap
SPI1 3 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 205 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 100 bp overlap
ChIP K-562_NABUT GSE74999.SPI1.K-562_NABUT 113 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 311 bp overlap
STAT3 12 datasets
ChIP HCC1937 GSE152203.STAT3.HCC1937 177 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 176 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 326 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 458 bp overlap
ChIP MCF-7_jc5842 GSE126004.STAT3.MCF-7_jc5842 222 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 351 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 159 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 206 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 323 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 453 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 310 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 137 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 140 bp overlap
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 203 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 94 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 170 bp overlap
ChIP K562 ENCFF319QZT 351 bp overlap
TEAD4 4 datasets
ChIP K562 ENCFF673NIK 363 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 468 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 508 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 198 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 238 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 253 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 185 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 400 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 508 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 508 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 81 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 71 bp overlap
ZFP36 1 dataset
ChIP K562 ENCFF255RZG 297 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 275 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 82 bp overlap
ZNF24 5 datasets
ChIP K-562 ENCSR695EQB.ZNF24.K-562 293 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 290 bp overlap
ChIP K562 ENCFF497GLV 352 bp overlap
ChIP K562 ENCFF615YYW 386 bp overlap
ChIP K562 ENCFF877JCX 404 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 141 bp overlap
ZNF423 1 dataset
ChIP HEK293 ENCFF937QHI 260 bp overlap
ZNF561 3 datasets
ChIP HEK293 ENCFF399XKF 316 bp overlap
ChIP HEK293 ENCFF399XKF 413 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 320 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 321 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 225 bp overlap
ZNF680 1 dataset
ChIP HEK293 GSE76494.ZNF680.HEK293 215 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 508 bp overlap
ZNF766 2 datasets
ChIP K562 ENCFF348LDO 499 bp overlap
ChIP K562 ENCFF348LDO 410 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 478 bp overlap
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