chr6 : 84,560,362 84,561,335
973 bp 148 TFs 0 linked genes
This 973 bp open chromatin element has no linked target genes and is bound by 148 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:84,555,362 – 84,566,335
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
148 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_36h DE_36h-ALX3_MA0634.2 6 bp overlap
AR 2 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 69 bp overlap
ChIP epididymis_HEE_R1881 GSE109061.AR.epididymis_HEE_R1881 186 bp overlap
ARID2 1 dataset
ChIP NGP GSE134626.ARID2.NGP 152 bp overlap
Arid3a 1 dataset
Motif DE_36h DE_36h-Arid3a_MA0151.1 6 bp overlap
BARX2 1 dataset
Motif DE_36h DE_36h-BARX2_MA1471.2 9 bp overlap
BRD4 5 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 182 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 525 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 292 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 415 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 353 bp overlap
DRGX 1 dataset
Motif DE_36h DE_36h-DRGX_MA1481.2 6 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
EMX1 1 dataset
Motif DE_36h DE_36h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_36h DE_36h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_36h DE_36h-EN1_MA0027.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 310 bp overlap
ESRRA 1 dataset
Motif DE_36h DE_36h-ESRRA_MA0592.4 9 bp overlap
ESRRB 1 dataset
Motif DE_36h DE_36h-ESRRB_MA0141.4 10 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 230 bp overlap
EVX1 1 dataset
Motif DE_36h DE_36h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_36h DE_36h-EVX2_MA0888.2 6 bp overlap
FEZF2 2 datasets
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 371 bp overlap
ChIP DE DE-FOXA2-2 289 bp overlap
FOXD2 2 datasets
Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap
Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_36h DE_36h-FOXE1_MA1487.3 12 bp overlap
FOXN3 1 dataset
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 125 bp overlap
GATA2 2 datasets
Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 424 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 286 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 639 bp overlap
ChIP DE DE-GATA4-2 376 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 14 datasets
ChIP DE DE-GATA6-1 476 bp overlap
ChIP DE DE-GATA6-1 361 bp overlap
ChIP DE DE-GATA6-2 432 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 489 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 410 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 457 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 384 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 466 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 583 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 356 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 283 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 270 bp overlap
GFI1 2 datasets
Motif DE_36h DE_36h-GFI1_MA0038.3 11 bp overlap
Motif DE_48h DE_48h-GFI1_MA0038.3 11 bp overlap
GRHL1 1 dataset
Motif DE_36h DE_36h-GRHL1_MA0647.2 10 bp overlap
GSX1 1 dataset
Motif DE_36h DE_36h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_36h DE_36h-GSX2_MA0893.3 7 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Gfi1B 2 datasets
Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
HAND2 2 datasets
ChIP Kelly GSE94822.HAND2.Kelly 416 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 574 bp overlap
HNF1A 3 datasets
ChIP HEE_1 GSE76376.HNF1A.HEE_1 318 bp overlap
ChIP HEE_1 GSE76376.HNF1A.HEE_1 157 bp overlap
ChIP HEE_5 GSE76376.HNF1A.HEE_5 285 bp overlap
HNF4A 1 dataset
Motif DE_36h DE_36h-HNF4A_MA0114.5 9 bp overlap
HNF4G 1 dataset
Motif DE_36h DE_36h-HNF4G_MA0484.3 9 bp overlap
HOXA1 1 dataset
Motif DE_36h DE_36h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_36h DE_36h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_36h DE_36h-HOXA3_MA2119.1 7 bp overlap
HOXA5 1 dataset
Motif DE_36h DE_36h-HOXA5_MA0158.2 8 bp overlap
HOXA6 1 dataset
Motif DE_36h DE_36h-HOXA6_MA1497.2 7 bp overlap
HOXB1 1 dataset
Motif DE_36h DE_36h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_36h DE_36h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_36h DE_36h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_36h DE_36h-HOXB5_MA0904.3 6 bp overlap
HOXB6 1 dataset
Motif DE_36h DE_36h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif DE_36h DE_36h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif DE_36h DE_36h-HOXB8_MA1502.2 7 bp overlap
HOXC8 1 dataset
Motif DE_36h DE_36h-HOXC8_MA1505.2 6 bp overlap
HOXD8 1 dataset
Motif DE_36h DE_36h-HOXD8_MA0910.3 7 bp overlap
Hand1 1 dataset
Motif DE_36h DE_36h-Hand1_MA2123.1 9 bp overlap
IRF2 1 dataset
Motif DE_36h DE_36h-IRF2_MA0051.2 16 bp overlap
IRF7 1 dataset
Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap
IRF9 1 dataset
Motif DE_36h DE_36h-IRF9_MA0653.1 15 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 588 bp overlap
ISX 1 dataset
Motif DE_36h DE_36h-ISX_MA0654.2 6 bp overlap
Irf1 1 dataset
Motif DE_36h DE_36h-Irf1_MA0050.4 11 bp overlap
Isl1 2 datasets
Motif DE_36h DE_36h-Isl1_MA1608.2 7 bp overlap
Motif DE_48h DE_48h-Isl1_MA1608.2 7 bp overlap
LHX5 1 dataset
Motif DE_36h DE_36h-LHX5_MA1519.2 7 bp overlap
LIN54 1 dataset
Motif DE_36h DE_36h-LIN54_MA0619.2 7 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 128 bp overlap
Lhx4 1 dataset
Motif DE_36h DE_36h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_36h DE_36h-Lhx8_MA0705.2 6 bp overlap
MEF2A 1 dataset
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_36h DE_36h-MEF2B_MA0660.1 12 bp overlap
MEF2D 1 dataset
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
MEOX1 1 dataset
Motif DE_36h DE_36h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_36h DE_36h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_36h DE_36h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_36h DE_36h-MNX1_MA0707.3 6 bp overlap
MYBL1 1 dataset
Motif DE_36h DE_36h-MYBL1_MA0776.1 12 bp overlap
MYC 1 dataset
ChIP WA01 ENCSR000DLI.MYC.WA01 96 bp overlap
MYCN 4 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 242 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 427 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 268 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 161 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 358 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 249 bp overlap
NKX6-2 1 dataset
Motif DE_36h DE_36h-NKX6-2_MA0675.2 6 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 107 bp overlap
NR5A1 1 dataset
Motif DE_36h DE_36h-NR5A1_MA1540.3 12 bp overlap
Nr2e1 1 dataset
Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap
Nr5A2 1 dataset
Motif DE_36h DE_36h-Nr5A2_MA0505.3 9 bp overlap
OVOL2 1 dataset
Motif DE_36h DE_36h-OVOL2_MA1545.2 7 bp overlap
PAX5 4 datasets
ChIP GM12878 ENCFF482PUW 251 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 263 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 306 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 448 bp overlap
PDX1 1 dataset
Motif DE_36h DE_36h-PDX1_MA0132.3 6 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 296 bp overlap
PHOX2A 1 dataset
Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 2 datasets
Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap
ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 296 bp overlap
POU1F1 1 dataset
Motif DE_36h DE_36h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_36h DE_36h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap
POU4F1 1 dataset
Motif DE_36h DE_36h-POU4F1_MA0790.2 12 bp overlap
POU4F2 1 dataset
Motif DE_36h DE_36h-POU4F2_MA0683.2 15 bp overlap
POU4F3 1 dataset
Motif DE_36h DE_36h-POU4F3_MA0791.2 12 bp overlap
POU6F1 1 dataset
Motif DE_36h DE_36h-POU6F1_MA0628.2 6 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_PPARG_HYPO GSE50144.PPARG.HUVEC-C_PPARG_HYPO 127 bp overlap
PROP1 1 dataset
Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap
PRRX1 1 dataset
Motif DE_36h DE_36h-PRRX1_MA0716.2 6 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 289 bp overlap
RAX2 1 dataset
Motif DE_36h DE_36h-RAX2_MA0717.2 6 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 261 bp overlap
Rarb 1 dataset
Motif DE_36h DE_36h-Rarb_MA0858.1 17 bp overlap
Rhox11 1 dataset
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
SFPQ 1 dataset
ChIP LTAD_siCTBP1-AS-EtOH GSE94577.SFPQ.LTAD_siCTBP1-AS-EtOH 204 bp overlap
SHOX 1 dataset
Motif DE_36h DE_36h-SHOX_MA0630.2 6 bp overlap
SIX1 2 datasets
Motif DE_36h DE_36h-SIX1_MA1118.2 9 bp overlap
Motif DE_48h DE_48h-SIX1_MA1118.2 9 bp overlap
SIX2 5 datasets
Motif DE_36h DE_36h-SIX2_MA1119.2 11 bp overlap
Motif DE_48h DE_48h-SIX2_MA1119.2 11 bp overlap
ChIP HEK GSE73865.SIX2.HEK 428 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 266 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 369 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 680 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 426 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 543 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 371 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 172 bp overlap
SRY 1 dataset
Motif DE_36h DE_36h-SRY_MA0084.2 7 bp overlap
STAT1::STAT2 2 datasets
Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap
Motif DE_36h DE_36h-STAT1STAT2_MA0517.2 13 bp overlap
Shox2 1 dataset
Motif DE_36h DE_36h-Shox2_MA0720.2 6 bp overlap
Stat2 1 dataset
Motif DE_36h DE_36h-Stat2_MA1623.2 10 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 495 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 300 bp overlap
TBX5 4 datasets
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
ChIP G296S GSE85628.TBX5.G296S 236 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 236 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 261 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 540 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 540 bp overlap
TFCP2 1 dataset
Motif DE_36h DE_36h-TFCP2_MA1968.2 9 bp overlap
TLX2 1 dataset
Motif DE_36h DE_36h-TLX2_MA1577.2 6 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
UNCX 1 dataset
Motif DE_36h DE_36h-UNCX_MA0721.2 6 bp overlap
VAX2 1 dataset
Motif DE_36h DE_36h-VAX2_MA0723.3 6 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 148 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T0 GSE39263.ZNF143.FLP143HA_T0 199 bp overlap
ZNF157 2 datasets
Motif DE_36h DE_36h-ZNF157_MA2331.1 21 bp overlap
Motif DE_48h DE_48h-ZNF157_MA2331.1 21 bp overlap
ZNF213 2 datasets
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
ZNF341 1 dataset
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
ZNF384 1 dataset
Motif DE_36h DE_36h-ZNF384_MA1125.2 8 bp overlap
ZNF582 3 datasets
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_36h DE_36h-ZNF582_MA1983.2 19 bp overlap
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF680 3 datasets
Motif DE_36h DE_36h-ZNF680_MA1729.2 11 bp overlap
Motif DE_36h DE_36h-ZNF680_MA1729.2 11 bp overlap
Motif DE_48h DE_48h-ZNF680_MA1729.2 11 bp overlap
ZNF708 2 datasets
Motif DE_36h DE_36h-ZNF708_MA1730.2 9 bp overlap
Motif DE_48h DE_48h-ZNF708_MA1730.2 9 bp overlap
ZSCAN4 2 datasets
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Motif DE_48h DE_48h-ZSCAN4_MA1155.1 15 bp overlap