chr6 : 10,398,166 10,398,903
737 bp 134 TFs 2 linked genes
This 737 bp open chromatin element is linked to TFAP2A-AS2 and TFAP2A and is bound by 134 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TFAP2A-AS2 5.6 kb Proximal Proximity
TFAP2A 5.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:10,393,166 – 10,403,903
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
134 transcription factors
Source
Cell type
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 604 bp overlap
ATOH7 1 dataset
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 373 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 642 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 707 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 409 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 323 bp overlap
BRD2 1 dataset
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 150 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 526 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 216 bp overlap
ChIP keratinocyte GSE140992.BRD4.keratinocyte 318 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 344 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 236 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 204 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 71 bp overlap
CTCF 18 datasets
ChIP BJ ENCSR000DQI.CTCF.BJ 69 bp overlap
ChIP HFFc6 ENCFF005CJI 300 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 55 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 342 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 264 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 304 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 148 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 69 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 162 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 86 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 54 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 126 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 193 bp overlap
ChIP keratinocyte ENCFF046PBT 124 bp overlap
ChIP keratinocyte ENCFF291YDC 124 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 304 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 97 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 113 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 298 bp overlap
EHMT2 1 dataset
ChIP Rh41 GSE118666.EHMT2.Rh41 168 bp overlap
ELF1 1 dataset
Motif DE_24h DE_24h-ELF1_MA0473.4 9 bp overlap
ELF3 1 dataset
Motif DE_24h DE_24h-ELF3_MA0640.3 9 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 691 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 520 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 481 bp overlap
ESR1 5 datasets
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 166 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 162 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 323 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 206 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 183 bp overlap
ETV1 1 dataset
Motif DE_24h DE_24h-ETV1_MA0761.3 9 bp overlap
EZH2 11 datasets
ChIP H1 ENCFF232NZA 737 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 407 bp overlap
ChIP HepG2 ENCFF912EIW 237 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 619 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 125 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 479 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 247 bp overlap
ChIP hESC GSE113817.EZH2.hESC 307 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 196 bp overlap
ChIP neural progenitor cell ENCFF018MKA 737 bp overlap
ChIP neural progenitor cell ENCFF472NFV 737 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Erg 1 dataset
Motif DE_24h DE_24h-Erg_MA0474.4 10 bp overlap
FLI1 1 dataset
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 316 bp overlap
FOXA1 1 dataset
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 138 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 97 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 196 bp overlap
GABPA 1 dataset
Motif DE_24h DE_24h-GABPA_MA0062.4 10 bp overlap
GATA2 2 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 284 bp overlap
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
IKZF1 1 dataset
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 182 bp overlap
Ikzf3 1 dataset
Motif DE_24h DE_24h-Ikzf3_MA1992.2 9 bp overlap
JARID2 7 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 461 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 311 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 737 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 737 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 207 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 654 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 432 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 614 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 279 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 257 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 77 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 179 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 100 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 69 bp overlap
MAF 1 dataset
Motif DE_12h DE_12h-MAF_MA1520.2 13 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 192 bp overlap
MAFA 1 dataset
Motif DE_12h DE_12h-MAFA_MA1521.2 13 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 288 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_24h DE_24h-MEIS2_MA0774.1 8 bp overlap
MORC2 1 dataset
ChIP HeLa_V5-MORC2-KO-W505A-MORC2-mut GSE95451.MORC2.HeLa_V5-MORC2-KO-W505A-MORC2-mut 150 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 170 bp overlap
Mafg 1 dataset
Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 131 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 315 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 240 bp overlap
NEUROG1 1 dataset
Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 111 bp overlap
NR1D1 1 dataset
Motif DE_12h DE_12h-NR1D1_MA1531.2 14 bp overlap
NR1D2 1 dataset
Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA1538.1 15 bp overlap
Motif DE_24h DE_24h-NR2F1_MA1538.1 15 bp overlap
NR2F6 2 datasets
Motif DE_12h DE_12h-NR2F6_MA1539.1 15 bp overlap
Motif DE_24h DE_24h-NR2F6_MA1539.1 15 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 342 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 449 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 380 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 274 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 402 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 191 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 737 bp overlap
PGR 1 dataset
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 144 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 221 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 2 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 224 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 8 datasets
ChIP BG03 GSE21614.POU5F1.BG03 120 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 278 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 106 bp overlap
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 587 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 379 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 188 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 200 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 495 bp overlap
PRDM1 2 datasets
ChIP HEK293 GSE76494.PRDM1.HEK293 91 bp overlap
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 184 bp overlap
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF967OJF 165 bp overlap
RELA 2 datasets
ChIP HDF_DMSO GSE77225.RELA.HDF_DMSO 114 bp overlap
ChIP HDF_NUTLIN GSE77225.RELA.HDF_NUTLIN 199 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 652 bp overlap
ChIP H1 ENCFF239FFS 610 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 421 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 406 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 366 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 112 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 60 bp overlap
RUNX1 3 datasets
ChIP AML GSE111821.RUNX1.AML 270 bp overlap
ChIP AML_age-50-70 GSE111821.RUNX1.AML_age-50-70 328 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 183 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 685 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 238 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 207 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 162 bp overlap
SMARCA4 2 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 191 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 485 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 127 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 313 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 371 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 337 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 576 bp overlap
STAT1 1 dataset
ChIP CD14_LPS GSE43036.STAT1.CD14_LPS 184 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 209 bp overlap
SUZ12 8 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 203 bp overlap
ChIP H1 ENCFF881NFR 737 bp overlap
ChIP HEK293T_PCGF1356fl GSE119618.SUZ12.HEK293T_PCGF1356fl 312 bp overlap
ChIP HEK293T_PCGF135fl GSE119618.SUZ12.HEK293T_PCGF135fl 351 bp overlap
ChIP HEK293T_PCGF2fl GSE119618.SUZ12.HEK293T_PCGF2fl 334 bp overlap
ChIP HEK293T_PCGF2fl_OHT GSE119618.SUZ12.HEK293T_PCGF2fl_OHT 354 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 477 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 231 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 189 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 265 bp overlap
TFAP4 1 dataset
Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 355 bp overlap
TP63 1 dataset
ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 251 bp overlap
VEZF1 1 dataset
Motif DE_12h DE_12h-VEZF1_MA1578.2 6 bp overlap
Vdr 1 dataset
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 438 bp overlap
ZBTB18 1 dataset
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 624 bp overlap
ChIP K562 ENCFF875HLX 388 bp overlap
ZBTB7A 3 datasets
Motif DE_24h DE_24h-ZBTB7A_MA0750.3 9 bp overlap
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 190 bp overlap
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 267 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 264 bp overlap
ZNF189 1 dataset
Motif DE_24h DE_24h-ZNF189_MA1725.2 9 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF548 1 dataset
ChIP HEK293 ENCFF762PDF 297 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF891 2 datasets
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 133 bp overlap
ChIP Hep-G2 ENCSR020CLV.ZNF891.Hep-G2 262 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap