chr5 : 181,059,167 181,059,608
441 bp 102 TFs 1 linked gene
This 441 bp open chromatin element is linked to BTNL9 and is bound by 102 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
BTNL9 6.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:181,054,167 – 181,064,608
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
102 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP GSC_387 GSE134972.ARNTL.GSC_387 374 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 392 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 441 bp overlap
BACH1 2 datasets
ChIP GM12878 ENCSR636MKU.BACH1.GM12878 249 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 128 bp overlap
BCL11A 2 datasets
ChIP MCF-10A ERP003925.BCL11A.MCF-10A 194 bp overlap
ChIP MDA-MB-157 ERP003925.BCL11A.MDA-MB-157 311 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 435 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 209 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 441 bp overlap
BHLHE40 2 datasets
ChIP GM12878 ENCFF521IZR 163 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 308 bp overlap
BRD4 7 datasets
ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 67 bp overlap
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 281 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 335 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 205 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 441 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 299 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 376 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 426 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 180 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 278 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 341 bp overlap
CREM 2 datasets
ChIP WTC11 ENCFF209ZUE 270 bp overlap
ChIP WTC11 ENCFF209ZUE 71 bp overlap
CTCF 6 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 426 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 317 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 51 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 64 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 310 bp overlap
CTCFL 1 dataset
ChIP delta-47 GSE70764.CTCFL.delta-47 263 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 348 bp overlap
ChIP BLaER1 ENCFF274GAT 237 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 331 bp overlap
E2F5 2 datasets
ChIP WTC11 ENCFF449LLF 292 bp overlap
ChIP WTC11 ENCFF449LLF 83 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 441 bp overlap
EED 2 datasets
ChIP ProEs GSE59087.EED.ProEs 152 bp overlap
ChIP ProEs GSE59087.EED.ProEs 53 bp overlap
ELF1 1 dataset
ChIP ME-1 GSE46044.ELF1.ME-1 224 bp overlap
ERG 6 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 395 bp overlap
ChIP K-562 GSE23730.ERG.K-562 87 bp overlap
ChIP K-562_DOX GSE23730.ERG.K-562_DOX 163 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 96 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 194 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 56 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 441 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 201 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 441 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 232 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 268 bp overlap
ChIP MCF-7_estradiol_45min_ChIP-and-reChIP GSE99626.ESR1.MCF-7_estradiol_45min_ChIP-and-reChIP 305 bp overlap
EZH2 34 datasets
ChIP A673 ENCFF790MVL 416 bp overlap
ChIP A673 ENCFF955JRZ 416 bp overlap
ChIP GM23338 ENCFF613YON 240 bp overlap
ChIP GM23338 ENCFF613YON 263 bp overlap
ChIP GM23338 ENCFF886DXX 408 bp overlap
ChIP H1 ENCFF232NZA 441 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 441 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 339 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 441 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 441 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 441 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 441 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 441 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 239 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 441 bp overlap
ChIP fibroblast of lung ENCFF479BAW 421 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 441 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 441 bp overlap
ChIP hESC GSE113817.EZH2.hESC 441 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 330 bp overlap
ChIP hepatocyte ENCFF118DKH 163 bp overlap
ChIP hepatocyte ENCFF552DZB 335 bp overlap
ChIP hepatocyte ENCFF552DZB 300 bp overlap
ChIP keratinocyte ENCFF070STK 441 bp overlap
ChIP keratinocyte ENCFF070STK 317 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 441 bp overlap
ChIP myotube ENCFF857GWB 209 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 366 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 441 bp overlap
ChIP neural progenitor cell ENCFF018MKA 441 bp overlap
ChIP neural progenitor cell ENCFF472NFV 441 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 230 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 269 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 185 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 56 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 335 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 380 bp overlap
FOXP1 1 dataset
ChIP WTC11 ENCFF338WGC 321 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 292 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE128445.GATA3.MCF-7 214 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 356 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 414 bp overlap
HDAC6 2 datasets
ChIP GM12878 ENCFF918SGD 393 bp overlap
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 380 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 194 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 360 bp overlap
HNRNPC 1 dataset
ChIP Hep-G2 GSE120104.HNRNPC.Hep-G2 224 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 247 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 441 bp overlap
ChIP Hep-G2 GSE107730.INO80.Hep-G2 364 bp overlap
JARID2 6 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 441 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 441 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 441 bp overlap
ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 441 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 441 bp overlap
ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 441 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 295 bp overlap
KDM4A 6 datasets
ChIP H1 ENCFF078LED 421 bp overlap
ChIP H1 ENCFF078LED 421 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 441 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 259 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 368 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 215 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 176 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 135 bp overlap
ChIP WTC11 ENCFF223QFY 229 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 232 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 102 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 159 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 423 bp overlap
NANOG 1 dataset
ChIP WA01 ERP004238.NANOG.WA01 186 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 441 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 278 bp overlap
NFKB1 1 dataset
ChIP HEK293T GSE129618.NFKB1.HEK293T 226 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 441 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 441 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 148 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 316 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 181 bp overlap
ChIP HEK293 GSE89017.OGG1.HEK293 76 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 236 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 65 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 441 bp overlap
POLR2A 2 datasets
ChIP spleen ENCFF446ZGT 441 bp overlap
ChIP spleen ENCFF706IUS 164 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 170 bp overlap
ChIP K562 ENCFF648YPL 170 bp overlap
POU5F1 5 datasets
ChIP BG03 GSE21614.POU5F1.BG03 264 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 441 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 428 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 271 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 441 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 434 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 353 bp overlap
RAD21 1 dataset
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 100 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 291 bp overlap
RBFOX2 5 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 441 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 441 bp overlap
ChIP K562 ENCFF196WTG 441 bp overlap
ChIP K562 ENCFF967GRF 402 bp overlap
ChIP K562 ENCFF967GRF 230 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 235 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 205 bp overlap
RELA 2 datasets
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 98 bp overlap
ChIP WTC11 ENCFF874IIP 383 bp overlap
REST 1 dataset
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 148 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 338 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 434 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 170 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 441 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 441 bp overlap
RUNX1 2 datasets
ChIP Jurkat GSE85524.RUNX1.Jurkat 441 bp overlap
ChIP ME-1 GSE46044.RUNX1.ME-1 210 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 441 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 170 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 405 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 352 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 216 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 441 bp overlap
SMARCA4 2 datasets
ChIP MCF-7 GSE128445.SMARCA4.MCF-7 415 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 169 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 231 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 234 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 213 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 441 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 441 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 342 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 441 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCFF498QAM 371 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 441 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 287 bp overlap
ChIP H1 ENCFF507HGF 192 bp overlap
ChIP H1 ENCFF881NFR 441 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 145 bp overlap
ChIP NT2-D1 ENCSR000EXH.SUZ12.NT2-D1 441 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 354 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 441 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 181 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 441 bp overlap
TGIF2 1 dataset
ChIP WTC11 ENCFF649SHI 280 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 438 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 153 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 441 bp overlap
ZBTB33 5 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 164 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 111 bp overlap
ChIP K562 ENCFF427SDV 322 bp overlap
ChIP K562 ENCFF427SDV 119 bp overlap
ChIP K562 ENCFF875HLX 67 bp overlap
ZBTB7A 2 datasets
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 336 bp overlap
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 302 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 261 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 347 bp overlap
ZNF2 1 dataset
ChIP HEK293T GSE78099.ZNF2.HEK293T 334 bp overlap
ZNF605 1 dataset
ChIP HEK293T GSE78099.ZNF605.HEK293T 377 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 435 bp overlap
ChIP HepG2 ENCFF840FYM 258 bp overlap