chr5 : 162,372,182 – 162,372,716
534 bp 113 TFs 0 linked genes
This 534 bp open chromatin element has no linked target genes and is bound by 113 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:162,367,182 – 162,377,716
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 400 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 473 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 412 bp overlap
ATF6 2 datasets
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Motif ES_0h ES_0h-ATF6_MA1466.2 13 bp overlap
ATOH7 2 datasets
Motif DE_12h DE_12h-ATOH7_MA1468.1 10 bp overlap
Motif ES_0h ES_0h-ATOH7_MA1468.1 10 bp overlap
Ascl2 4 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 2 datasets
Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap
Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap
BRD4 2 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 266 bp overlap
ChIP hESC GSE33281.BRD4.hESC 71 bp overlap
Bcl11B 2 datasets
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
Motif ES_0h ES_0h-Bcl11B_MA1989.2 9 bp overlap
Bhlha15 2 datasets
Motif DE_12h DE_12h-Bhlha15_MA1472.3 8 bp overlap
Motif ES_0h ES_0h-Bhlha15_MA1472.3 8 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 144 bp overlap
CDX1 2 datasets
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CDX2 2 datasets
Motif DE_12h DE_12h-CDX2_MA0465.3 8 bp overlap
Motif ES_0h ES_0h-CDX2_MA0465.3 8 bp overlap
CDX4 2 datasets
Motif DE_12h DE_12h-CDX4_MA1473.2 9 bp overlap
Motif ES_0h ES_0h-CDX4_MA1473.2 9 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.CEBPA.Kasumi-1_SIRUNX1ETO 150 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 366 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 280 bp overlap
CREB1 6 datasets
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
Motif ES_0h ES_0h-CREB1_MA0018.5 8 bp overlap
ChIP GM23338 ENCFF432ZEW 305 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 221 bp overlap
ChIP H1 ENCFF955PMP 136 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 242 bp overlap
CREB3L4 2 datasets
Motif DE_12h DE_12h-CREB3L4_MA1475.2 9 bp overlap
Motif ES_0h ES_0h-CREB3L4_MA1475.2 9 bp overlap
CREM 3 datasets
Motif DE_12h DE_12h-CREM_MA0609.3 10 bp overlap
Motif ES_0h ES_0h-CREM_MA0609.3 10 bp overlap
ChIP WTC11 ENCFF209ZUE 481 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 527 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 338 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 284 bp overlap
EZH2 3 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 74 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 236 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 216 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
Motif ES_0h ES_0h-FOS_MA1951.2 13 bp overlap
FOSB::JUN 2 datasets
Motif DE_12h DE_12h-FOSBJUN_MA1127.1 11 bp overlap
Motif ES_0h ES_0h-FOSBJUN_MA1127.1 11 bp overlap
FOSL2::JUND 2 datasets
Motif DE_12h DE_12h-FOSL2JUND_MA1145.2 10 bp overlap
Motif ES_0h ES_0h-FOSL2JUND_MA1145.2 10 bp overlap
FOXH1 2 datasets
Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap
Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GFI1 2 datasets
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
Motif ES_0h ES_0h-GFI1_MA0038.3 11 bp overlap
Gli1 2 datasets
Motif DE_12h DE_12h-Gli1_MA1990.2 10 bp overlap
Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap
HAND2 4 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 2 datasets
ChIP WA01 ENCSR000BNR.HDAC2.WA01 123 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 160 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 254 bp overlap
HOXA10 2 datasets
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
Motif ES_0h ES_0h-HOXA10_MA0899.2 9 bp overlap
HOXB13 2 datasets
Motif DE_12h DE_12h-HOXB13_MA0901.3 9 bp overlap
Motif ES_0h ES_0h-HOXB13_MA0901.3 9 bp overlap
HOXC10 2 datasets
Motif DE_12h DE_12h-HOXC10_MA0905.2 9 bp overlap
Motif ES_0h ES_0h-HOXC10_MA0905.2 9 bp overlap
HOXC12 2 datasets
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
Motif ES_0h ES_0h-HOXC12_MA0906.2 10 bp overlap
HOXD9 2 datasets
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
JDP2 2 datasets
Motif DE_12h DE_12h-JDP2_MA0656.2 10 bp overlap
Motif ES_0h ES_0h-JDP2_MA0656.2 10 bp overlap
JUN 5 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 279 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 252 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 377 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 433 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 473 bp overlap
JUN::JUNB 2 datasets
Motif DE_12h DE_12h-JUNJUNB_MA1133.2 11 bp overlap
Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap
JUNB 2 datasets
Motif DE_12h DE_12h-JUNB_MA1140.3 11 bp overlap
Motif ES_0h ES_0h-JUNB_MA1140.3 11 bp overlap
JUND 2 datasets
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 193 bp overlap
MAZ 2 datasets
Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap
Motif ES_0h ES_0h-MAZ_MA1522.2 8 bp overlap
MED1 2 datasets
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 156 bp overlap
ChIP dopaminergic-neuron_Dopamine_neurons GSE93905.MED1.dopaminergic-neuron_Dopamine_neurons 141 bp overlap
MEF2C 2 datasets
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
Motif ES_0h ES_0h-MEF2C_MA0497.2 11 bp overlap
MEIS1 4 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MYF5 2 datasets
Motif DE_12h DE_12h-MYF5_MA1641.2 8 bp overlap
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYOD1 7 datasets
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 374 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 172 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 321 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 181 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 159 bp overlap
MYOG 2 datasets
Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 497 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 289 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 130 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 368 bp overlap
ChIP hESC GSE20650.NANOG.hESC 154 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 196 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 2 datasets
Motif DE_12h DE_12h-NHLH2_MA1529.2 16 bp overlap
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
Neurod2 2 datasets
Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap
Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap
Olig2 2 datasets
Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PAX8 1 dataset
ChIP OVSAHO GSE79893.PAX8.OVSAHO 54 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 265 bp overlap
POU2F1::SOX2 2 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 204 bp overlap
POU5F1 12 datasets
ChIP BG03 GSE21614.POU5F1.BG03 236 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 247 bp overlap
ChIP GM23338 ENCFF333SNB 311 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 500 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 409 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 184 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 140 bp overlap
ChIP hESC GSE20650.POU5F1.hESC 136 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 409 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 251 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR362VCG.POU5F1.neuron_bipolar_doxy_4d 130 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 239 bp overlap
PRDM1 1 dataset
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Ptf1A 4 datasets
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_12h DE_12h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
RAD21 2 datasets
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 206 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 239 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 194 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 258 bp overlap
RUNX2 2 datasets
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
Motif ES_0h ES_0h-RUNX2_MA0511.2 9 bp overlap
Runx1 2 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 4 datasets
ChIP BG03 GSE21614.SMAD3.BG03 195 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 231 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 213 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 181 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 407 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 478 bp overlap
SMARCB1 3 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 227 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 310 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 341 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 326 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 380 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_shSNAI2 GSE137168.SNAI2.SMS-CTR_shSNAI2 215 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 534 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 240 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 221 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 160 bp overlap
TBX19 2 datasets
Motif DE_12h DE_12h-TBX19_MA0804.2 17 bp overlap
Motif ES_0h ES_0h-TBX19_MA0804.2 17 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 284 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 469 bp overlap
TFAP2A 2 datasets
Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap
Motif ES_0h ES_0h-TFAP2A_MA0003.5 9 bp overlap
TFAP2C 2 datasets
Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap
Motif ES_0h ES_0h-TFAP2C_MA0814.3 9 bp overlap
TFAP4 2 datasets
Motif DE_12h DE_12h-TFAP4_MA0691.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
THRA 2 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
TP53 1 dataset
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 213 bp overlap
Tcf12 2 datasets
Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Twist2 2 datasets
Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 122 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 277 bp overlap
ZBTB21 1 dataset
ChIP WTC11 ENCFF677ZYY 401 bp overlap
ZKSCAN3 2 datasets
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 155 bp overlap
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF184 1 dataset
Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF384 2 datasets
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
Motif ES_0h ES_0h-ZNF384_MA1125.2 8 bp overlap
ZNF418 2 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF462 1 dataset
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 293 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF547 2 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF692 2 datasets
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap
ZNF708 2 datasets
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
Motif ES_0h ES_0h-ZNF708_MA1730.2 9 bp overlap
ZNF93 2 datasets
Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap
Motif ES_0h ES_0h-ZNF93_MA1721.2 14 bp overlap
ZSCAN4 2 datasets
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Motif ES_0h ES_0h-ZSCAN4_MA1155.1 15 bp overlap
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