chr5 : 127,838,631 127,839,274
643 bp 129 TFs 0 linked genes
This 643 bp open chromatin element has no linked target genes and is bound by 129 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:127,833,631 – 127,844,274
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
129 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP GSE80256.AR.LNCaP 262 bp overlap
ChIP prostate-cancer_PDX_81 GSE130408.AR.prostate-cancer_PDX_81 116 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 214 bp overlap
Atf3 1 dataset
Motif DE_36h DE_36h-Atf3_MA1988.2 7 bp overlap
BACH1 1 dataset
Motif DE_36h DE_36h-BACH1_MA1633.2 9 bp overlap
BACH2 1 dataset
Motif DE_36h DE_36h-BACH2_MA1101.3 11 bp overlap
BATF 1 dataset
Motif DE_36h DE_36h-BATF_MA1634.2 7 bp overlap
BATF3 1 dataset
Motif DE_36h DE_36h-BATF3_MA0835.3 7 bp overlap
BNC2 1 dataset
Motif DE_36h DE_36h-BNC2_MA1928.2 7 bp overlap
BRD2 6 datasets
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 204 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 203 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 203 bp overlap
ChIP MDA-MB-231_NTsiRNA_JQ1 GSE116879.BRD2.MDA-MB-231_NTsiRNA_JQ1 234 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 342 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 254 bp overlap
BRD4 8 datasets
ChIP HT29 GSE73319.BRD4.HT29 643 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 246 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 198 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 198 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 246 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 380 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 243 bp overlap
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 218 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 308 bp overlap
CDX2 1 dataset
ChIP LS180 GSE31939.CDX2.LS180 218 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 268 bp overlap
CEBPB 1 dataset
ChIP MV4-11 GSE88746.CEBPB.MV4-11 204 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 277 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 305 bp overlap
CTCF 10 datasets
ChIP FT282 GSE131931.CTCF.FT282 146 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 101 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 140 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 128 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 139 bp overlap
ChIP Peyers-patch ENCSR419ANE.CTCF.Peyers-patch 139 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 95 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 254 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 104 bp overlap
ChIP heart right ventricle ENCFF027ORH 272 bp overlap
EGR1 1 dataset
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 232 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 146 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 601 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 643 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 538 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 314 bp overlap
EP300 1 dataset
ChIP AML GSE131939.EP300.AML 125 bp overlap
ERG 8 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 158 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 453 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 242 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 626 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 139 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 156 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 186 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 81 bp overlap
ETS1 7 datasets
ChIP 786-O GSE86092.ETS1.786-O 166 bp overlap
ChIP HUVEC-C_12h GSE93030.ETS1.HUVEC-C_12h 301 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 184 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 195 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.ETS1.HUVEC-C_VEGF_12h 301 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 181 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 184 bp overlap
ETV5::HOXA2 3 datasets
Motif DE_36h DE_36h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif DE_48h DE_48h-ETV5HOXA2_MA1948.2 12 bp overlap
Motif DE_60h DE_60h-ETV5HOXA2_MA1948.2 12 bp overlap
EVI1 1 dataset
ChIP SKH1 GSE87283.EVI1.SKH1 208 bp overlap
FEZF2 2 datasets
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
Motif DE_36h DE_36h-FEZF2_MA2341.1 8 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 249 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 643 bp overlap
Motif DE_36h DE_36h-FOS_MA0476.2 8 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 401 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 358 bp overlap
FOSL1 1 dataset
Motif DE_36h DE_36h-FOSL1_MA0477.3 9 bp overlap
FOSL2 3 datasets
Motif DE_36h DE_36h-FOSL2_MA0478.2 10 bp overlap
ChIP SK-N-SH ENCFF127ZDW 285 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 132 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 141 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 310 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 445 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 509 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 454 bp overlap
FOXA2 2 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 328 bp overlap
ChIP DE DE-FOXA2-1 366 bp overlap
GATA2 2 datasets
ChIP SKH1 GSE87283.GATA2.SKH1 441 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 114 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 298 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 296 bp overlap
ChIP DE DE-GATA6-2 330 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 278 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 230 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 175 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 472 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 443 bp overlap
JMJD1C 2 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 172 bp overlap
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 434 bp overlap
JUN 9 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 312 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 410 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 406 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 294 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 393 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 294 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 220 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 228 bp overlap
ChIP T-cell GSE136853.JUN.T-cell 333 bp overlap
JUNB 3 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 610 bp overlap
Motif DE_36h DE_36h-JUNB_MA0490.3 9 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 274 bp overlap
JUND 6 datasets
ChIP Calu-3 GSE85401.JUND.Calu-3 195 bp overlap
Motif DE_36h DE_36h-JUND_MA0491.3 9 bp overlap
ChIP H1 ENCFF010YXS 311 bp overlap
ChIP SK-N-SH ENCFF971JKN 291 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 144 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 142 bp overlap
Jun 1 dataset
Motif DE_36h DE_36h-Jun_MA0489.3 8 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 643 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
MAFK 1 dataset
Motif DE_36h DE_36h-MAFK_MA0496.4 10 bp overlap
MAZ 1 dataset
Motif DE_36h DE_36h-MAZ_MA1522.2 8 bp overlap
MEIS1 1 dataset
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MYC 1 dataset
ChIP endothelial_umbilical-vein ENCSR000DLU.MYC.endothelial_umbilical-vein 101 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 108 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 93 bp overlap
NCOR2 1 dataset
ChIP LS180_125 GSE39277.NCOR2.LS180_125 120 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 227 bp overlap
Nfe2l2 1 dataset
Motif DE_36h DE_36h-Nfe2l2_MA0150.3 11 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
POLR2A 1 dataset
ChIP stomach ENCFF820WZN 345 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 128 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 362 bp overlap
RAD21 1 dataset
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 117 bp overlap
RELA 6 datasets
ChIP HUVEC-C_TNF-30min GSE121890.RELA.HUVEC-C_TNF-30min 115 bp overlap
ChIP HUVEC-C_TNF_30M GSE34500.RELA.HUVEC-C_TNF_30M 115 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 200 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 72 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 63 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 209 bp overlap
REST 3 datasets
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 148 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 187 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 204 bp overlap
RUNX1 1 dataset
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 147 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 174 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 317 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 296 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 252 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCA4 3 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 86 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 130 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 198 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 289 bp overlap
SOX12 1 dataset
Motif DE_36h DE_36h-SOX12_MA1561.2 10 bp overlap
SOX14 1 dataset
Motif DE_36h DE_36h-SOX14_MA1562.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 254 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 309 bp overlap
SOX18 1 dataset
Motif DE_36h DE_36h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 300 bp overlap
SOX8 1 dataset
Motif DE_36h DE_36h-SOX8_MA0868.3 7 bp overlap
SOX9 1 dataset
Motif DE_36h DE_36h-SOX9_MA0077.2 8 bp overlap
SP4 1 dataset
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 97 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 88 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 119 bp overlap
SREBF1 1 dataset
Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap
SREBF2 1 dataset
Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap
SREBP2 1 dataset
ChIP monocyte GSE129202.SREBP2.monocyte 585 bp overlap
STAG2 1 dataset
ChIP OCI-AML-3 GSE111537.STAG2.OCI-AML-3 146 bp overlap
STAT3 2 datasets
ChIP MDA-MB-231 GSE152203.STAT3.MDA-MB-231 181 bp overlap
ChIP monocyte_LPS GSE120943.STAT3.monocyte_LPS 139 bp overlap
Sox11 1 dataset
Motif DE_36h DE_36h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_36h DE_36h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_36h DE_36h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_36h DE_36h-Sox7_MA2095.1 10 bp overlap
TAL1 1 dataset
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 173 bp overlap
TCF12 1 dataset
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 178 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 224 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 92 bp overlap
ZBTB33 3 datasets
Motif DE_36h DE_36h-ZBTB33_MA0527.2 10 bp overlap
Motif DE_48h DE_48h-ZBTB33_MA0527.2 10 bp overlap
Motif DE_60h DE_60h-ZBTB33_MA0527.2 10 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 147 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF213 1 dataset
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 310 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 386 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 126 bp overlap
ZNF549 1 dataset
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF770 5 datasets
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
Motif DE_36h DE_36h-ZNF770_MA2099.1 8 bp overlap
ChIP HEK293 ENCFF468FCG 385 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 366 bp overlap
ChIP HEK293 GSE76494.ZNF770.HEK293 209 bp overlap
ZNF85 3 datasets
Motif DE_36h DE_36h-ZNF85_MA1720.2 12 bp overlap
Motif DE_48h DE_48h-ZNF85_MA1720.2 12 bp overlap
Motif DE_60h DE_60h-ZNF85_MA1720.2 12 bp overlap
ZSCAN4 1 dataset
Motif DE_36h DE_36h-ZSCAN4_MA1155.1 15 bp overlap
Zfx 2 datasets
Motif DE_36h DE_36h-Zfx_MA0146.3 10 bp overlap
Motif DE_60h DE_60h-Zfx_MA0146.3 10 bp overlap