chr5 : 66,704,722 66,705,145
423 bp 93 TFs 0 linked genes
This 423 bp open chromatin element has no linked target genes and is bound by 93 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:66,699,722 – 66,710,145
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 214 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 241 bp overlap
ARID1A 2 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 138 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.ARID1A.MCF-7_Fulvestrant 149 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 260 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 324 bp overlap
BCL6B 1 dataset
ChIP HEK293 ENCFF555YRB 177 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 405 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 318 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 245 bp overlap
BRD4 3 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 61 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 316 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 275 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 247 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 166 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 223 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 75 bp overlap
ESR1 9 datasets
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 119 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 79 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 97 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 52 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 247 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 97 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 100 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 151 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 180 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 88 bp overlap
EZH2 1 dataset
ChIP WA01 ENCSR000ASY.EZH2.WA01 257 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 206 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 92 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 164 bp overlap
FOXA1 23 datasets
ChIP MCF-7 GSE72249.FOXA1.MCF-7 101 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 73 bp overlap
ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 53 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 120 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 118 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 94 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 73 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 81 bp overlap
ChIP T-47D_E2_TAM ERP000380.FOXA1.T-47D_E2_TAM 116 bp overlap
ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 88 bp overlap
ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 87 bp overlap
ChIP T-47D_JC4748 GSE126004.FOXA1.T-47D_JC4748 129 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 130 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 108 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 186 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 51 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 150 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 123 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 101 bp overlap
ChIP breast_tumor_Male_4 GSE104399.FOXA1.breast_tumor_Male_4 109 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 127 bp overlap
ChIP primary-breast-cancer_B4_DSG GSE114737.FOXA1.primary-breast-cancer_B4_DSG 120 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 112 bp overlap
FOXK1 2 datasets
ChIP WTC11 ENCFF875IGU 306 bp overlap
ChIP WTC11 ENCFF875IGU 309 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 116 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 50 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 193 bp overlap
GATA3 7 datasets
ChIP MCF-7 ENCFF352QVM 158 bp overlap
ChIP MCF-7 ENCFF437NQS 148 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 152 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 133 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 58 bp overlap
ChIP T-47D GSE51274.GATA3.T-47D 94 bp overlap
ChIP T-47D_sc GSE122847.GATA3.T-47D_sc 97 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 257 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 136 bp overlap
HDAC2 2 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 247 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 231 bp overlap
HOXB13 1 dataset
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 121 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 217 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 306 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 81 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 313 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 124 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 251 bp overlap
MED1 8 datasets
ChIP adipocyte GSE140782.MED1.adipocyte 261 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 75 bp overlap
ChIP hMSC-TERT4_D1 GSE104537.MED1.hMSC-TERT4_D1 165 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 185 bp overlap
ChIP hMSC-TERT4_D7 GSE104537.MED1.hMSC-TERT4_D7 152 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 247 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 144 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 251 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 56 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 81 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 288 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 193 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 423 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 323 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 290 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 423 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 407 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 423 bp overlap
ChIP hESC GSE20650.NANOG.hESC 242 bp overlap
ChIP hESC GSE18292.NANOG.hESC 209 bp overlap
NIPBL 3 datasets
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 304 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 191 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 216 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 85 bp overlap
OSR2 2 datasets
ChIP HEK293 ENCFF875BDB 103 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 143 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 376 bp overlap
POLR2A 2 datasets
ChIP prostate gland ENCFF545MVF 250 bp overlap
ChIP prostate gland ENCFF881OMH 61 bp overlap
POU5F1 8 datasets
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 378 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 423 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 150 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 423 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 420 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 288 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 238 bp overlap
PRDM14 3 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 423 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 362 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 201 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 121 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 173 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 94 bp overlap
RAD21 1 dataset
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 255 bp overlap
RNF2 3 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 141 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 222 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 337 bp overlap
RUNX1 1 dataset
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 109 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 116 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 170 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 192 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 63 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 137 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD2-3.HGrC1_C134W-TGF 61 bp overlap
SMAD4 1 dataset
ChIP HGrC1_C134W-TGF GSE138496.SMAD4.HGrC1_C134W-TGF 105 bp overlap
SMARCA2 6 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 275 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 211 bp overlap
ChIP NPC_K755R-pos_ab GSE122631.SMARCA2.NPC_K755R-pos_ab 112 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 241 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 330 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA2.NPC_R1159Q 201 bp overlap
SMARCA4 7 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 118 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 103 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 377 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 222 bp overlap
ChIP NPC_R1159Q GSE122631.SMARCA4.NPC_R1159Q 210 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 56 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 383 bp overlap
SMARCB1 4 datasets
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 198 bp overlap
ChIP MCF-7_DCDT GSE123284.SMARCB1.MCF-7_DCDT 175 bp overlap
ChIP MCF-7_Fulvestrant GSE123284.SMARCB1.MCF-7_Fulvestrant 117 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 228 bp overlap
SMARCC1 5 datasets
ChIP MCF-7 GSE124225.SMARCC1.MCF-7 88 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 175 bp overlap
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 79 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 212 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 55 bp overlap
SMARCD3 2 datasets
ChIP MCF-7 GSE124225.SMARCD3.MCF-7 144 bp overlap
ChIP MCF-7_KO GSE124225.SMARCD3.MCF-7_KO 92 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 279 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 256 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 174 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 136 bp overlap
STAT3 15 datasets
ChIP HCC1187 GSE152203.STAT3.HCC1187 102 bp overlap
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 184 bp overlap
ChIP MCF-7_jc5836 GSE126004.STAT3.MCF-7_jc5836 215 bp overlap
ChIP MCF-7_jc5838 GSE126004.STAT3.MCF-7_jc5838 194 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 192 bp overlap
ChIP MCF-7_jc5848 GSE126004.STAT3.MCF-7_jc5848 105 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 181 bp overlap
ChIP T-47D_JC4741 GSE126004.STAT3.T-47D_JC4741 217 bp overlap
ChIP T-47D_JC4751 GSE126004.STAT3.T-47D_JC4751 228 bp overlap
ChIP T-47D_JC4753 GSE126004.STAT3.T-47D_JC4753 223 bp overlap
ChIP T-47D_JC4755 GSE126004.STAT3.T-47D_JC4755 163 bp overlap
ChIP T-47D_JC4757 GSE126004.STAT3.T-47D_JC4757 251 bp overlap
ChIP T-47D_JC5054 GSE126004.STAT3.T-47D_JC5054 204 bp overlap
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 88 bp overlap
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 254 bp overlap
TBP 1 dataset
ChIP hiPSC_WTb_RNase-neg GSE128135.TBP.hiPSC_WTb_RNase-neg 232 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 251 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 259 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 303 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 212 bp overlap
TEAD4 2 datasets
ChIP MCF-7_BLRP_WT_E2 GSE125594.TEAD4.MCF-7_BLRP_WT_E2 95 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 244 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 182 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 136 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 180 bp overlap
YY1 2 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 86 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 125 bp overlap
YY1AP1 1 dataset
ChIP T-47D_Veh GSE125594.YY1AP1.T-47D_Veh 65 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 65 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 96 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 80 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 57 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 153 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 79 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 145 bp overlap
ZNF34 2 datasets
ChIP HEK293 ENCFF481TFV 189 bp overlap
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 72 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 151 bp overlap
ZNF366 2 datasets
ChIP HEK293 ENCFF799ATK 210 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 198 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 192 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 260 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 204 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 161 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCFF040AZE 180 bp overlap
ZNF843 1 dataset
ChIP HEK293 ENCFF241QRH 96 bp overlap
ZXDB 2 datasets
ChIP HEK293 ENCFF835SGA 181 bp overlap
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 56 bp overlap