chr4 : 6,951,909 – 6,952,321
412 bp 119 TFs 0 linked genes
This 412 bp open chromatin element has no linked target genes and is bound by 119 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:6,946,909 – 6,957,321
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
119 transcription factors
Source
Cell type
AFF1 2 datasets
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 412 bp overlap
ChIP SEM_DMSO GSE90762.AFF1.SEM_DMSO 412 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 223 bp overlap
BCL11A 6 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 109 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 124 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 84 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 102 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 122 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 281 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 238 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 289 bp overlap
ChIP SEM GSE83671.BRD4.SEM 412 bp overlap
Bcl11B 3 datasets
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 293 bp overlap
ChIP K562 ENCFF403WPG 412 bp overlap
DNMT1 1 dataset
ChIP K-562 ENCSR987PBI.DNMT1.K-562 120 bp overlap
DPF2 2 datasets
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 170 bp overlap
ChIP K-562 ENCSR219BXP.DPF2.K-562 92 bp overlap
E2F6 4 datasets
ChIP K-562 ENCSR000EWJ.E2F6.K-562 221 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 209 bp overlap
ChIP K562 ENCFF136LTS 325 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 108 bp overlap
E4F1 2 datasets
ChIP K-562 ENCSR731LHZ.E4F1.K-562 344 bp overlap
ChIP K562 ENCFF622HMZ 412 bp overlap
EOMES 2 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 283 bp overlap
ERF::FIGLA 1 dataset
Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
EZH1 1 dataset
ChIP ProEs GSE59087.EZH1.ProEs 133 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap
FIGLA 1 dataset
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
FOXK2 3 datasets
ChIP K-562 ENCSR508DQA.FOXK2.K-562 223 bp overlap
ChIP K-562 ENCSR302AWT.FOXK2.K-562 175 bp overlap
ChIP K562 ENCFF245WKP 251 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 262 bp overlap
FOXO1::ELK3 1 dataset
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
GATA1 1 dataset
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 328 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 370 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 392 bp overlap
HAND2 3 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif DE_36h DE_36h-HAND2_MA1638.2 6 bp overlap
Motif DE_48h DE_48h-HAND2_MA1638.2 6 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 110 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 191 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 116 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR000DJZ.HDAC8.K-562 99 bp overlap
HDGF 6 datasets
ChIP K-562 ENCSR563YDA.HDGF.K-562 275 bp overlap
ChIP K-562 ENCSR197ALX.HDGF.K-562 222 bp overlap
ChIP K562 ENCFF195BET 235 bp overlap
ChIP K562 ENCFF195BET 408 bp overlap
ChIP K562 ENCFF682FBH 224 bp overlap
ChIP K562 ENCFF682FBH 412 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif DE_36h DE_36h-HIC2_MA0738.2 6 bp overlap
IKZF1 3 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
ChIP K-562 ENCSR395HWC.IKZF1.K-562 158 bp overlap
ChIP K562 ENCFF771OHZ 270 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 237 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 412 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 365 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 179 bp overlap
KLF1 4 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
Motif DE_48h DE_48h-KLF1_MA0493.3 8 bp overlap
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 108 bp overlap
KLF10 3 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_36h DE_36h-KLF10_MA1511.2 9 bp overlap
Motif DE_48h DE_48h-KLF10_MA1511.2 9 bp overlap
KLF13 2 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif DE_36h DE_36h-KLF13_MA0657.2 17 bp overlap
KLF14 3 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
Motif DE_48h DE_48h-KLF14_MA0740.2 9 bp overlap
KLF16 3 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_36h DE_36h-KLF16_MA0741.1 11 bp overlap
Motif DE_48h DE_48h-KLF16_MA0741.1 11 bp overlap
KLF2 3 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
Motif DE_48h DE_48h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
Motif DE_48h DE_48h-KLF4_MA0039.5 8 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
KLF9 3 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
Motif DE_48h DE_48h-KLF9_MA1107.3 11 bp overlap
KMT2A 2 datasets
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 345 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 412 bp overlap
L3MBTL2 3 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 264 bp overlap
ChIP K562 ENCFF320EQC 273 bp overlap
ChIP K562 ENCFF320EQC 412 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 217 bp overlap
MAX 3 datasets
ChIP K-562 ENCSR000EFV.MAX.K-562 229 bp overlap
ChIP K562 ENCFF398VJM 412 bp overlap
ChIP K562 ENCFF524IJO 395 bp overlap
MAZ 3 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 222 bp overlap
ChIP K562 ENCFF333ZIV 321 bp overlap
ChIP K562 ENCFF333ZIV 257 bp overlap
MLLT1 3 datasets
ChIP K-562 ENCSR107GRP.MLLT1.K-562 204 bp overlap
ChIP K-562 ENCSR675LRO.MLLT1.K-562 81 bp overlap
ChIP K562 ENCFF871DSA 142 bp overlap
MTA2 1 dataset
ChIP K-562 ENCSR411UYA.MTA2.K-562 125 bp overlap
MYB 2 datasets
ChIP Jurkat GSE59657.MYB.Jurkat 252 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 167 bp overlap
MYOD1 1 dataset
ChIP myoblast GSE50413.MYOD1.myoblast 136 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 299 bp overlap
NEUROG2 3 datasets
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_36h DE_36h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_48h DE_48h-NEUROG2_MA1642.2 7 bp overlap
NFE2 1 dataset
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 69 bp overlap
NFYB 1 dataset
ChIP K-562 GSE26439.NFYB.K-562 188 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 213 bp overlap
PKNOX1 5 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_36h DE_36h-PKNOX1_MA0782.3 10 bp overlap
Motif DE_48h DE_48h-PKNOX1_MA0782.3 10 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 333 bp overlap
ChIP K562 ENCFF236IUS 274 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 227 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 386 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 268 bp overlap
Ptf1A 4 datasets
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
Motif DE_36h DE_36h-Ptf1A_MA1618.2 9 bp overlap
Motif DE_48h DE_48h-Ptf1A_MA1618.2 9 bp overlap
RAD21 1 dataset
ChIP lymphoblast GSE155324.RAD21.lymphoblast 119 bp overlap
RBPJ 3 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RFX1 5 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif DE_36h DE_36h-RFX1_MA0509.3 16 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 277 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 234 bp overlap
ChIP K562 ENCFF809XVG 310 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif DE_36h DE_36h-RFX3_MA0798.3 16 bp overlap
RORA 1 dataset
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
RORC 1 dataset
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
RUNX1 1 dataset
ChIP CD34_ADULT GSE70660.RUNX1.CD34_ADULT 154 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 286 bp overlap
RUNX2 4 datasets
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
Motif DE_36h DE_36h-RUNX2_MA0511.2 9 bp overlap
Motif DE_48h DE_48h-RUNX2_MA0511.2 9 bp overlap
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 266 bp overlap
Runx1 3 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
Motif DE_48h DE_48h-Runx1_MA0002.3 9 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 198 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 258 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 412 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 412 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 412 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 412 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 412 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 412 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 412 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 412 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 235 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 252 bp overlap
SMARCA4 5 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 234 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 207 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 213 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 208 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 275 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 367 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 280 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 254 bp overlap
SP2 2 datasets
ChIP HEK293 ENCSR807LQP.SP2.HEK293 207 bp overlap
ChIP HEK293 GSE76494.SP2.HEK293 162 bp overlap
SP3 3 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
Motif DE_48h DE_48h-SP3_MA0746.3 11 bp overlap
SREBF2 3 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap
Motif DE_48h DE_48h-SREBF2_MA0596.1 10 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 246 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 412 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
ChIP CD4_Th1 GSE62482.TBX21.CD4_Th1 175 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TCF3 2 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 174 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 311 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 214 bp overlap
TWIST1 3 datasets
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Motif DE_36h DE_36h-TWIST1_MA1123.3 8 bp overlap
Motif DE_48h DE_48h-TWIST1_MA1123.3 8 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 185 bp overlap
ZBTB18 4 datasets
Motif DE_12h DE_12h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_24h DE_24h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_36h DE_36h-ZBTB18_MA0698.2 11 bp overlap
Motif DE_48h DE_48h-ZBTB18_MA0698.2 11 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 220 bp overlap
ZBTB5 1 dataset
ChIP K562 ENCFF856PUG 163 bp overlap
ZEB1 2 datasets
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 112 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 124 bp overlap
ZFP69B 2 datasets
ChIP HEK293 ENCFF942LFP 136 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 294 bp overlap
ZNF143 1 dataset
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 134 bp overlap
ZNF184 2 datasets
Motif DE_12h DE_12h-ZNF184_MA2120.1 13 bp overlap
ChIP K-562 ENCSR621ATC.ZNF184.K-562 66 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 111 bp overlap
ZNF282 1 dataset
Motif DE_36h DE_36h-ZNF282_MA1154.2 15 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
ZNF343 1 dataset
Motif DE_12h DE_12h-ZNF343_MA1711.2 16 bp overlap
ZNF528 3 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif DE_36h DE_36h-ZNF528_MA1597.1 17 bp overlap
Motif DE_48h DE_48h-ZNF528_MA1597.1 17 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 223 bp overlap
ZNF652 1 dataset
Motif DE_12h DE_12h-ZNF652_MA1657.2 9 bp overlap
ZNF692 5 datasets
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap
Motif DE_48h DE_48h-ZNF692_MA1986.2 8 bp overlap
ChIP HEK293 ENCFF040AZE 293 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 355 bp overlap
ZNF740 3 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap
Motif DE_48h DE_48h-ZNF740_MA0753.3 10 bp overlap
ZNF85 1 dataset
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
ZSCAN21 1 dataset
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 281 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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