chr2 : 119,700,871 119,701,304
433 bp 93 TFs 4 linked genes
This 433 bp open chromatin element is linked to 4 target genes and is bound by 93 transcription factors.
Linked Genes
4 genes
Link type
Gene Expression Dist. to TSS Distance Link type
TMEM177 22.0 kb Distal Multiome
PTPN4 58.8 kb Distal Multiome
TMEM37 269.3 kb Distal Multiome
EPB41L5 311.9 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:119,695,871 – 119,706,304
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
93 transcription factors
Source
Cell type
None 2 datasets
ChIP HepG2 ENCFF731CFD 347 bp overlap
ChIP HepG2 ENCFF731CFD 433 bp overlap
AR 1 dataset
ChIP LAPC-4_R1881 GSE148358.AR.LAPC-4_R1881 189 bp overlap
ARNT 1 dataset
ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 357 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 433 bp overlap
ChIP H1 ENCFF399KAM 373 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 433 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 170 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 433 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 433 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 433 bp overlap
CEBPA 1 dataset
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 225 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 368 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 175 bp overlap
CHD7 2 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 215 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 258 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 223 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 341 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 156 bp overlap
ERF 1 dataset
ChIP HepG2 ENCFF647PIT 337 bp overlap
ESR1 20 datasets
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 251 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 233 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 316 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 320 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 218 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 260 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 377 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 346 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 263 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 349 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 378 bp overlap
ChIP T-47D_siCont-IL6 GSE126004.ESR1.T-47D_siCont-IL6 272 bp overlap
ChIP T-47D_siCont-Veh GSE126004.ESR1.T-47D_siCont-Veh 190 bp overlap
ChIP T-47D_siFOXA1-IL6 GSE126004.ESR1.T-47D_siFOXA1-IL6 197 bp overlap
ChIP T-47D_siFOXA1-Veh GSE126004.ESR1.T-47D_siFOXA1-Veh 225 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 347 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 254 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 177 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 243 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 385 bp overlap
ESRRA 2 datasets
ChIP BT-474 GSE81651.ESRRA.BT-474 287 bp overlap
Motif ES_0h ES_0h-ESRRA_MA0592.4 9 bp overlap
EWSR1-FLI1 2 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 2 datasets
ChIP neural progenitor cell ENCFF472NFV 433 bp overlap
ChIP neural progenitor cell ENCFF472NFV 353 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 241 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 228 bp overlap
FOXP4 2 datasets
ChIP WTC11 ENCFF708TAF 347 bp overlap
ChIP WTC11 ENCFF708TAF 264 bp overlap
Foxn1 1 dataset
Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 203 bp overlap
GTF2F1 1 dataset
ChIP Hep-G2 GSE120104.GTF2F1.Hep-G2 208 bp overlap
HDAC2 2 datasets
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 145 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 278 bp overlap
HNRNPK 1 dataset
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 212 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 321 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 229 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 433 bp overlap
MAX 5 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 192 bp overlap
ChIP HepG2 ENCFF507HCX 247 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 146 bp overlap
ChIP WTC11 ENCFF223QFY 427 bp overlap
ChIP WTC11 ENCFF223QFY 392 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 200 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 433 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 310 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 389 bp overlap
ChIP hESC GSE18292.NANOG.hESC 199 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 118 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 164 bp overlap
PGR 9 datasets
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 433 bp overlap
ChIP T-47D GSE31129.PGR.T-47D 418 bp overlap
ChIP T-47D-A_E2_R5020 GSE80358.PGR.T-47D-A_E2_R5020 416 bp overlap
ChIP T-47D-A_R5020 GSE80358.PGR.T-47D-A_R5020 289 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 433 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 433 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 433 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 433 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 433 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 382 bp overlap
ChIP H1 ENCFF566JSR 187 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 209 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 320 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 433 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 433 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 412 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 201 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 134 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 309 bp overlap
RELA 1 dataset
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 82 bp overlap
REST 2 datasets
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP H1 ENCFF429RUE 245 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 110 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 241 bp overlap
SCRT1 1 dataset
Motif ES_0h ES_0h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 94 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 433 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 281 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 179 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 222 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 410 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 394 bp overlap
SOX2 3 datasets
ChIP HNSC GSE69479.SOX2.HNSC 287 bp overlap
ChIP hESC GSE18292.SOX2.hESC 188 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 433 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 271 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SPI1 8 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 75 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 56 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 147 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 133 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 53 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 53 bp overlap
ChIP monocyte GSE31621.SPI1.monocyte 52 bp overlap
ChIP primary-neutrophil_donorE GSE128834.SPI1.primary-neutrophil_donorE 50 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 389 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 215 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 186 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 199 bp overlap
TBP 2 datasets
ChIP hESC_2h GSE122298.TBP.hESC_2h 155 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 68 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 274 bp overlap
TCF7L1 1 dataset
Motif ES_0h ES_0h-TCF7L1_MA1421.1 12 bp overlap
TEAD1 2 datasets
Motif ES_0h ES_0h-TEAD1_MA0090.4 9 bp overlap
ChIP WTC11 ENCFF502QUV 348 bp overlap
TEAD2 1 dataset
Motif ES_0h ES_0h-TEAD2_MA1121.2 7 bp overlap
TEAD3 2 datasets
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
ChIP HepG2 ENCFF054UUL 356 bp overlap
TEAD4 6 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 360 bp overlap
Motif ES_0h ES_0h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP MCF-7_BLRP_WT_Veh GSE125594.TEAD4.MCF-7_BLRP_WT_Veh 258 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 166 bp overlap
ChIP T-47D_Veh GSE125594.TEAD4.T-47D_Veh 234 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 367 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 433 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 433 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 191 bp overlap
TGIF2 1 dataset
ChIP HepG2 ENCFF421ZJN 409 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 363 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 187 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 433 bp overlap
ZNF235 1 dataset
ChIP HepG2 ENCFF831SQZ 152 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
Motif ES_0h ES_0h-ZNF263_MA0528.3 7 bp overlap
ZNF292 1 dataset
ChIP HepG2 ENCFF975MAJ 374 bp overlap
ZNF320 1 dataset
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF396 1 dataset
ChIP WTC11 ENCFF776JWJ 284 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 229 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 433 bp overlap
ZNF501 1 dataset
ChIP HepG2 ENCFF879XZR 215 bp overlap
ZNF670 1 dataset
ChIP HepG2 ENCFF684IKN 69 bp overlap
ZNF684 2 datasets
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
Motif ES_0h ES_0h-ZNF684_MA1600.2 14 bp overlap
ZNF816 1 dataset
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
ZSCAN31 2 datasets
Motif DE_12h DE_12h-ZSCAN31_MA1722.2 18 bp overlap
Motif ES_0h ES_0h-ZSCAN31_MA1722.2 18 bp overlap