chr18 : 28,088,513 28,088,856
343 bp 125 TFs 0 linked genes
This 343 bp open chromatin element has no linked target genes and is bound by 125 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:28,083,513 – 28,093,856
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
125 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP GSE80256.AR.LNCaP 184 bp overlap
ASCL1 4 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 261 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 283 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 343 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 197 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 317 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 206 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 252 bp overlap
CTCF 2 datasets
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 189 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 220 bp overlap
CTCFL 1 dataset
Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap
Dmrt1 1 dataset
Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap
EBF3 1 dataset
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 209 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 271 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 234 bp overlap
ChIP WA01 ENCSR000AUQ.EP300.WA01 115 bp overlap
ERF::HOXB13 2 datasets
Motif DE_12h DE_12h-ERFHOXB13_MA1937.2 13 bp overlap
Motif ES_0h ES_0h-ERFHOXB13_MA1937.2 13 bp overlap
ERF::SREBF2 2 datasets
Motif DE_12h DE_12h-ERFSREBF2_MA1939.2 16 bp overlap
Motif ES_0h ES_0h-ERFSREBF2_MA1939.2 16 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 343 bp overlap
ETS1 3 datasets
ChIP GM23338 ENCFF701IZH 343 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 193 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 182 bp overlap
ETV7 1 dataset
Motif DE_12h DE_12h-ETV7_MA1708.2 9 bp overlap
EZH2 2 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 144 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 226 bp overlap
Ebf2 1 dataset
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
FIGLA 2 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 321 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
GATA6 3 datasets
ChIP DE_D1 S41-DE-d1-GATA6-exp2 259 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 178 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 308 bp overlap
GLIS3 1 dataset
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 154 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 178 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 320 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 337 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 343 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 186 bp overlap
KLF14 1 dataset
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
KLF4 1 dataset
ChIP hiPSC GSE56567.KLF4.hiPSC 145 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 204 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
NANOG 6 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 343 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 215 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 223 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 307 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 253 bp overlap
ChIP hESC GSE20650.NANOG.hESC 200 bp overlap
NCOA2 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA2.MCF-7_E2 193 bp overlap
NEUROG2 1 dataset
Motif DE_12h DE_12h-NEUROG2_MA0669.1 10 bp overlap
NHLH1 2 datasets
Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NIPBL 3 datasets
ChIP WA09 GSE105028.NIPBL.WA09 229 bp overlap
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 282 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 209 bp overlap
NKX2-4 2 datasets
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 240 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 341 bp overlap
NKX2-8 2 datasets
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 117 bp overlap
Nkx2-1 2 datasets
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
Motif ES_0h ES_0h-Nkx2-1_MA1994.2 7 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 246 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 220 bp overlap
ChIP H1 ENCFF833NJP 342 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 260 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 326 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 343 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 268 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 145 bp overlap
PRDM14 4 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 343 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 343 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 326 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 343 bp overlap
Prdm4 2 datasets
Motif DE_12h DE_12h-Prdm4_MA1647.3 11 bp overlap
Motif ES_0h ES_0h-Prdm4_MA1647.3 11 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 174 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 142 bp overlap
RARA::RXRA 3 datasets
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RFX7 2 datasets
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
Motif ES_0h ES_0h-RFX7_MA1554.2 8 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 329 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 343 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 297 bp overlap
RXRA 2 datasets
ChIP H1 ENCFF570NHK 201 bp overlap
ChIP WA01 ENCSR000BJW.RXRA.WA01 246 bp overlap
RXRA::VDR 2 datasets
Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap
Motif ES_0h ES_0h-RXRAVDR_MA0074.1 15 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 201 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000BIS.SIN3A.WA01 138 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 265 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 269 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 158 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 328 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 171 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 279 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 321 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 237 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 280 bp overlap
SNAI1 2 datasets
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
Motif ES_0h ES_0h-SNAI2_MA0745.3 8 bp overlap
SNAI3 2 datasets
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX21 2 datasets
Motif DE_12h DE_12h-SOX21_MA0866.1 15 bp overlap
Motif ES_0h ES_0h-SOX21_MA0866.1 15 bp overlap
SP1 4 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP H1 ENCFF263FUH 305 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 303 bp overlap
ChIP WTC11 ENCFF688PEU 343 bp overlap
SP2 1 dataset
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 232 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
STAT1 2 datasets
Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 2 datasets
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
Stat4 2 datasets
Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
Stat5b 2 datasets
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
Motif ES_0h ES_0h-Stat5b_MA1625.2 9 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TBX5 6 datasets
ChIP G296S GSE85628.TBX5.G296S 343 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 343 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 343 bp overlap
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 343 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 343 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 343 bp overlap
TCF12 4 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 252 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 343 bp overlap
TCF3 3 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
ChIP NPC GSE154479.TCF3.NPC 343 bp overlap
TCF4 2 datasets
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 273 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 235 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 243 bp overlap
TWIST1 1 dataset
Motif DE_12h DE_12h-TWIST1_MA1123.3 8 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 152 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 211 bp overlap
ZBTB24 1 dataset
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 244 bp overlap
ZEB1 2 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
ZNF816 2 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif ES_0h ES_0h-ZNF816_MA1719.2 15 bp overlap
Zfp809 2 datasets
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap