chr15 : 81,877,627 81,878,133
506 bp 109 TFs 1 linked gene
This 506 bp open chromatin element is linked to LINC01418 and is bound by 109 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC01418 6.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:81,872,627 – 81,883,133
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
AR 6 datasets
ChIP VCaP GSE148358.AR.VCaP 137 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 229 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.AR.VCaP_DHTTHZ1 138 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 159 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 176 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 195 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 254 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCFF194VKZ 72 bp overlap
BCL11A 1 dataset
ChIP HEK293 ENCFF294OHB 59 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 161 bp overlap
BRD3 2 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 167 bp overlap
ChIP HEK293T GSE39579.BRD3.HEK293T 80 bp overlap
BRD4 9 datasets
ChIP HEK293T GSE39579.BRD4.HEK293T 119 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 291 bp overlap
ChIP VCaP GSE148358.BRD4.VCaP 266 bp overlap
ChIP VCaP_R1881 GSE148358.BRD4.VCaP_R1881 245 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 317 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 316 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 277 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 173 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 196 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 255 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 293 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 265 bp overlap
CTCF 32 datasets
ChIP HAP1 GSE152721.CTCF.HAP1 98 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 58 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 63 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 467 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 156 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 67 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 78 bp overlap
ChIP IMR-90_siRNA GSE125639.CTCF.IMR-90_siRNA 51 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 120 bp overlap
ChIP body of pancreas ENCFF269EDN 75 bp overlap
ChIP body of pancreas ENCFF438KTE 101 bp overlap
ChIP colon_transverse ENCSR236YGF.CTCF.colon_transverse 270 bp overlap
ChIP esophagus muscularis mucosa ENCFF045JBW 92 bp overlap
ChIP esophagus muscularis mucosa ENCFF182PYY 72 bp overlap
ChIP esophagus muscularis mucosa ENCFF544GAS 103 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 182 bp overlap
ChIP gastroesophageal sphincter ENCFF125ESZ 112 bp overlap
ChIP gastroesophageal sphincter ENCFF546QIK 112 bp overlap
ChIP gastroesophageal sphincter ENCFF569YIT 88 bp overlap
ChIP hepatocyte ENCFF263BLJ 115 bp overlap
ChIP neural progenitor cell ENCFF420RBO 119 bp overlap
ChIP sigmoid colon ENCFF219LPW 78 bp overlap
ChIP thyroid gland ENCFF163TUI 164 bp overlap
ChIP thyroid gland ENCFF204HWS 58 bp overlap
ChIP thyroid gland ENCFF300RYK 94 bp overlap
ChIP thyroid-gland ENCSR145HBC.CTCF.thyroid-gland 106 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 89 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 54 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 52 bp overlap
ChIP tibial nerve ENCFF475AOE 132 bp overlap
ChIP tibial-nerve ENCSR875NEW.CTCF.tibial-nerve 149 bp overlap
ChIP transverse colon ENCFF471AZS 92 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 179 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 463 bp overlap
ERG 5 datasets
ChIP VCaP GSE49091.ERG.VCaP 338 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 307 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 114 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 151 bp overlap
ChIP VCaP_SH2_DHT GSE79128.ERG.VCaP_SH2_DHT 332 bp overlap
ESR1 3 datasets
ChIP MCF-7_ethanol_MKL1D200 GSE107476.ESR1.MCF-7_ethanol_MKL1D200 254 bp overlap
ChIP VCaP_E2 GSE43985.ESR1.VCaP_E2 67 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 198 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 506 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 204 bp overlap
FOXA1 1 dataset
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 506 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 460 bp overlap
ChIP DE DE-FOXA2-2 494 bp overlap
GABPA 2 datasets
ChIP RWPE-1 GSE29808.GABPA.RWPE-1 189 bp overlap
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 187 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 375 bp overlap
ChIP DE DE-GATA4-2 369 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 469 bp overlap
ChIP DE DE-GATA6-2 443 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 377 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 506 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 495 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 506 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 506 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 495 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 335 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 148 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 506 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCFF008ZWC 106 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 336 bp overlap
KLF10 1 dataset
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 206 bp overlap
KLF16 1 dataset
ChIP HEK293 ENCFF558HSJ 160 bp overlap
KLF7 1 dataset
ChIP HEK293 ENCFF599UKL 92 bp overlap
KLF8 1 dataset
ChIP HEK293 ENCFF929IAJ 100 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 417 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 196 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 347 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCFF994GSG 260 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 166 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 83 bp overlap
MED1 3 datasets
ChIP VCaP GSE148358.MED1.VCaP 311 bp overlap
ChIP VCaP_DHTTHZ1 GSE125245.MED1.VCaP_DHTTHZ1 159 bp overlap
ChIP VCaP_Darolutamide GSE148358.MED1.VCaP_Darolutamide 326 bp overlap
MYC 1 dataset
ChIP P493-6 GSE77061.MYC.P493-6 132 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 179 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 79 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 240 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 156 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 276 bp overlap
NFKBIA 1 dataset
ChIP dermal GSE30082.NFKBIA.dermal 240 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 181 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 497 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 260 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 98 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 162 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 373 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 1 dataset
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 322 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 101 bp overlap
PRDM6 2 datasets
ChIP HEK293 GSE76494.PRDM6.HEK293 449 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 375 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 443 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 410 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 502 bp overlap
ChIP HEK293_siE1A-TAZ GSE130135.RAD21.HEK293_siE1A-TAZ 165 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 163 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 202 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000EBO.SIN3A.WA01 164 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 506 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 413 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 201 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 494 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 482 bp overlap
SMC1 1 dataset
ChIP HAP1 GSE94992.SMC1.HAP1 186 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 51 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 426 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 506 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 50 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 218 bp overlap
TP63 1 dataset
ChIP JHU-029 GSE88859.TP63.JHU-029 77 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 247 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 63 bp overlap
TSHZ1 1 dataset
ChIP HEK293 ENCFF893BGV 144 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 109 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 174 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 101 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 215 bp overlap
ZBTB21 1 dataset
ChIP HEK293 ENCFF509WYZ 89 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 284 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 416 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 152 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 225 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 152 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 112 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 342 bp overlap
ZFP69B 3 datasets
ChIP HEK293 ENCFF942LFP 199 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 253 bp overlap
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 79 bp overlap
ZNF121 3 datasets
ChIP HEK293 ENCFF839FUF 59 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 263 bp overlap
ChIP HEK293 GSE76494.ZNF121.HEK293 161 bp overlap
ZNF133 1 dataset
ChIP HEK293 ENCFF844RST 66 bp overlap
ZNF169 1 dataset
ChIP HEK293 ENCFF983EYS 50 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCFF066NGR 52 bp overlap
ZNF257 1 dataset
ChIP HEK293T GSE78099.ZNF257.HEK293T 99 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 268 bp overlap
ZNF319 2 datasets
ChIP K-562 ENCSR231PDA.ZNF319.K-562 92 bp overlap
ChIP K562 ENCFF561ZSB 64 bp overlap
ZNF324 1 dataset
ChIP HEK293 ENCFF062DPE 126 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 307 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 109 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 139 bp overlap
ZNF416 1 dataset
ChIP HEK293 ENCFF444YXH 96 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 56 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 161 bp overlap
ZNF549 1 dataset
ChIP HEK293 GSE76494.ZNF549.HEK293 82 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 251 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 220 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 69 bp overlap
ZNF596 3 datasets
ChIP HEK293 ENCFF854MGB 176 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 506 bp overlap
ChIP HEK293 GSE76494.ZNF596.HEK293 62 bp overlap
ZNF610 1 dataset
ChIP HEK293 ENCFF778UKJ 57 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 284 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 308 bp overlap
ZNF664 2 datasets
ChIP HEK293 ENCFF343XSW 126 bp overlap
ChIP HEK293 ENCSR714LZQ.ZNF664.HEK293 115 bp overlap
ZNF692 3 datasets
ChIP HEK293 ENCFF040AZE 199 bp overlap
ChIP HEK293 ENCFF040AZE 71 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 506 bp overlap
ZNF701 1 dataset
ChIP HEK293 ENCFF041ZMJ 98 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCFF374TCG 108 bp overlap
ZNF768 1 dataset
ChIP HEK293 GSE76494.ZNF768.HEK293 180 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 65 bp overlap
ZNF785 1 dataset
ChIP HEK293 ENCFF777AIW 98 bp overlap
ZNF791 1 dataset
ChIP HEK293 ENCFF232OEV 65 bp overlap
ZNF93 1 dataset
ChIP HEK293T GSE78099.ZNF93.HEK293T 221 bp overlap
ZSCAN21 2 datasets
ChIP HEK293 ENCFF582WUP 65 bp overlap
ChIP HEK293 ENCSR253CKN.ZSCAN21.HEK293 103 bp overlap