chr11 : 119,421,972 119,422,277
305 bp 90 TFs 2 linked genes
This 305 bp open chromatin element is linked to THY1 and THY1-AS1 and is bound by 90 transcription factors.
Linked Genes
2 genes
Distance
Gene Expression Dist. to TSS Distance Link type
THY1 921 bp At TSS Proximity
THY1-AS1 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:119,416,972 – 119,427,277
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 257 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 147 bp overlap
ASH2L 1 dataset
ChIP GM12878 ENCSR849WCQ.ASH2L.GM12878 204 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 91 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 160 bp overlap
ChIP WA01 GSE104690.BCOR.WA01 89 bp overlap
BRD2 3 datasets
ChIP LPS141 GSE111253.BRD2.LPS141 191 bp overlap
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 223 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD2.THP-1_iBET-BD1 242 bp overlap
BRD4 6 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 237 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 305 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 175 bp overlap
ChIP SK-N-BE2-C_Resistant-veh GSE107706.BRD4.SK-N-BE2-C_Resistant-veh 140 bp overlap
ChIP hESC GSE33281.BRD4.hESC 88 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 305 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 254 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 171 bp overlap
CHD1 4 datasets
ChIP H1 ENCFF998XEK 270 bp overlap
ChIP H1 ENCFF998XEK 305 bp overlap
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 216 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 217 bp overlap
CREB1 2 datasets
ChIP H1 ENCFF955PMP 292 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 258 bp overlap
CTCF 26 datasets
ChIP BJ ENCFF434HEC 201 bp overlap
ChIP GM06990 ENCFF471OQT 242 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 111 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 123 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 172 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 218 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 256 bp overlap
ChIP brain ENCFF163BBN 133 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 71 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 305 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF458OBF 305 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 131 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 173 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 287 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 131 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 122 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 97 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 220 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 305 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 252 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 183 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 262 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 305 bp overlap
ChIP neural cell ENCFF335ADI 265 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 305 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 230 bp overlap
CTCFL 1 dataset
ChIP FT282 GSE131931.CTCFL.FT282 305 bp overlap
DDX5 1 dataset
ChIP BT-549 GSE112961.DDX5.BT-549 168 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 195 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 165 bp overlap
ELF1 2 datasets
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 166 bp overlap
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 119 bp overlap
ERG 1 dataset
ChIP ME-1 GSE46044.ERG.ME-1 305 bp overlap
ESR1 8 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 182 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 221 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 225 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 161 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 214 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 193 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 277 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 156 bp overlap
EZH2 14 datasets
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 305 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 200 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 305 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 69 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 69 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 160 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 305 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 305 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 234 bp overlap
ChIP fibroblast of lung ENCFF479BAW 252 bp overlap
ChIP keratinocyte ENCFF070STK 163 bp overlap
ChIP keratinocyte ENCFF070STK 305 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 305 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 218 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 125 bp overlap
GATA6 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 179 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 129 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 262 bp overlap
HDAC2 2 datasets
ChIP VCaP_ETOH GSE28950.HDAC2.VCaP_ETOH 226 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 305 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 305 bp overlap
HMGXB4 1 dataset
ChIP WTC11 ENCFF962POR 305 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF824TGK 88 bp overlap
INO80 1 dataset
ChIP Hep-G2 GSE97411.INO80.Hep-G2 305 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 305 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 305 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 193 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 200 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 141 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 231 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 305 bp overlap
MXI1 6 datasets
ChIP IMR-90 ENCFF040YVH 237 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 187 bp overlap
ChIP SK-N-SH ENCFF746HVJ 305 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 297 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 305 bp overlap
ChIP neural cell ENCFF623HQN 305 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 101 bp overlap
MYC 4 datasets
ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 305 bp overlap
ChIP BE2C_SHWDR5 GSE70098.MYC.BE2C_SHWDR5 305 bp overlap
ChIP NB69 GSE138295.MYC.NB69 233 bp overlap
ChIP U2OS_SHRCTR GSE77356.MYC.U2OS_SHRCTR 100 bp overlap
MYCN 3 datasets
ChIP BE2C GSE80151.MYCN.BE2C 285 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 188 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 270 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 262 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 284 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 201 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 228 bp overlap
NRF1 3 datasets
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 191 bp overlap
ChIP SK-N-SH ENCFF820YTU 246 bp overlap
ChIP SK-N-SH ENCSR000EHZ.NRF1.SK-N-SH 172 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 289 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 269 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 298 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 271 bp overlap
OLIG2 2 datasets
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 291 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 93 bp overlap
PAX5 6 datasets
ChIP GM12878 ENCFF482PUW 124 bp overlap
ChIP GM12878 ENCFF503GOV 263 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 305 bp overlap
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 305 bp overlap
ChIP GM12892 ENCFF635MSF 269 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 280 bp overlap
PAX6 1 dataset
ChIP EndoC-betaH2 GSE87530.PAX6.EndoC-betaH2 206 bp overlap
PDX1 1 dataset
ChIP hiPSC GSE125768.PDX1.hiPSC 185 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 186 bp overlap
POLR2A 6 datasets
ChIP GM23338 ENCFF450WCS 305 bp overlap
ChIP H1 ENCFF566JSR 305 bp overlap
ChIP H1 ENCFF566JSR 265 bp overlap
ChIP neural cell ENCFF604SPB 258 bp overlap
ChIP vagina ENCFF384GAB 305 bp overlap
ChIP vagina ENCFF384GAB 292 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 261 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 176 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 294 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 177 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 228 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 253 bp overlap
RAD21 2 datasets
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 305 bp overlap
ChIP neural cell ENCFF564MOT 75 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 258 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 305 bp overlap
REST 2 datasets
ChIP SK-N-SH ENCFF861MKH 245 bp overlap
ChIP neural ENCSR000BTV.REST.neural 282 bp overlap
RORC 1 dataset
ChIP HCC70 GSE126380.RORC.HCC70 273 bp overlap
RUNX1 1 dataset
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 243 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 200 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 305 bp overlap
SIN3A 7 datasets
ChIP H1 ENCFF042ZSL 277 bp overlap
ChIP SK-N-SH ENCFF931NFD 174 bp overlap
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 305 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 305 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 288 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 158 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 276 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 267 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 180 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15684 GSE132290.SMARCA4.A-549_AG15684 106 bp overlap
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 131 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 268 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 238 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 201 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 179 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 194 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 147 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 176 bp overlap
SMARCB1 2 datasets
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 305 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 305 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 305 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 236 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 181 bp overlap
SUPT5H 1 dataset
ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 117 bp overlap
SUZ12 3 datasets
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 237 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 193 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 220 bp overlap
TAF1 4 datasets
ChIP H1 ENCFF478SZO 285 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 163 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 165 bp overlap
ChIP neural ENCSR000BTX.TAF1.neural 305 bp overlap
TBP 1 dataset
ChIP H1 ENCFF859IIO 165 bp overlap
TEAD4 1 dataset
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 227 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 228 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 305 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 305 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 305 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 276 bp overlap
ZBTB14 2 datasets
ChIP Hep-G2 ENCSR532WFC.ZBTB14.Hep-G2 142 bp overlap
ChIP HepG2 ENCFF570VWN 305 bp overlap
ZBTB26 3 datasets
ChIP HEK293 ENCFF752POA 305 bp overlap
ChIP HEK293 ENCFF752TCU 305 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 218 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 305 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 305 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 305 bp overlap
ZNF141 1 dataset
ChIP HEK293T GSE78099.ZNF141.HEK293T 96 bp overlap
ZNF24 1 dataset
ChIP K562 ENCFF615YYW 50 bp overlap
ZNF800 2 datasets
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 226 bp overlap
ChIP HepG2 ENCFF840FYM 305 bp overlap