chr11 : 113,628,900 113,629,434
534 bp 147 TFs 2 linked genes
This 534 bp open chromatin element is linked to ZW10 and USP28 and is bound by 147 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ZW10 144.6 kb Distal Multiome
USP28 246.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:113,623,900 – 113,634,434
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
147 transcription factors
Source
Cell type
AR 1 dataset
ChIP WTC11 ENCFF267GQJ 317 bp overlap
ASCL1 4 datasets
Motif ES_0h ES_0h-ASCL1_MA1100.3 8 bp overlap
Motif ES_0h ES_0h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 105 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 127 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 534 bp overlap
ATF2 2 datasets
ChIP H1 ENCFF295GZO 506 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 396 bp overlap
Ascl2 1 dataset
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 362 bp overlap
BARX2 1 dataset
Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap
BCL11A 4 datasets
ChIP H1 ENCFF833IPY 145 bp overlap
ChIP H1 ENCFF836SSR 177 bp overlap
ChIP WA01 ENCSR000BIP.BCL11A.WA01 134 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 123 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 305 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 247 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 373 bp overlap
BRD4 4 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 529 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 367 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 534 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 376 bp overlap
CEBPB 2 datasets
ChIP H1 ENCFF871PTR 261 bp overlap
ChIP WA01 ENCSR000EBV.CEBPB.WA01 197 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 216 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 485 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 280 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 361 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 437 bp overlap
ChIP H1 ENCFF329MAX 477 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 398 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 93 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 216 bp overlap
EBF1 2 datasets
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
Motif ES_0h ES_0h-EBF1_MA0154.5 11 bp overlap
EBF3 2 datasets
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
Motif ES_0h ES_0h-EBF3_MA1637.2 9 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 261 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 152 bp overlap
EP300 3 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 228 bp overlap
ChIP hESC GSE17917.EP300.hESC 534 bp overlap
ERF::FOXO1 2 datasets
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
Motif ES_0h ES_0h-ERFFOXO1_MA1936.2 12 bp overlap
ETV2::FIGLA 2 datasets
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FOXO1 2 datasets
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif ES_0h ES_0h-ETV5FOXO1_MA1947.2 10 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 437 bp overlap
EZH2 2 datasets
ChIP hESC GSE113817.EZH2.hESC 222 bp overlap
ChIP neural progenitor cell ENCFF018MKA 422 bp overlap
Ebf2 1 dataset
Motif ES_0h ES_0h-Ebf2_MA1604.2 9 bp overlap
Ebf4 1 dataset
Motif ES_0h ES_0h-Ebf4_MA2122.1 11 bp overlap
FERD3L 1 dataset
Motif ES_0h ES_0h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 506 bp overlap
ChIP DE DE-FOXA2-2 453 bp overlap
FOXO1::ELK1 2 datasets
Motif DE_12h DE_12h-FOXO1ELK1_MA1954.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK1_MA1954.2 13 bp overlap
FOXO1::ELK3 2 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXO1::FLI1 2 datasets
Motif DE_12h DE_12h-FOXO1FLI1_MA1956.2 13 bp overlap
Motif ES_0h ES_0h-FOXO1FLI1_MA1956.2 13 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 388 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 435 bp overlap
HDAC2 5 datasets
ChIP H1 ENCFF353UJQ 451 bp overlap
ChIP H1 ENCFF353UJQ 162 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 415 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 139 bp overlap
HIC2 1 dataset
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 362 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 451 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 280 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 503 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif ES_0h ES_0h-KLF1_MA0493.3 8 bp overlap
KLF15 2 datasets
Motif DE_12h DE_12h-KLF15_MA1513.2 8 bp overlap
Motif ES_0h ES_0h-KLF15_MA1513.2 8 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif ES_0h ES_0h-KLF2_MA1515.2 8 bp overlap
KLF4 3 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif ES_0h ES_0h-KLF4_MA0039.5 8 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 157 bp overlap
KLF9 2 datasets
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
Motif ES_0h ES_0h-KLF9_MA1107.3 11 bp overlap
LEF1 2 datasets
ChIP hESC GSE64758.LEF1.hESC 246 bp overlap
ChIP hESC_WNT3A GSE64758.LEF1.hESC_WNT3A 247 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 271 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 493 bp overlap
MSC 1 dataset
Motif ES_0h ES_0h-MSC_MA0665.1 10 bp overlap
MYBL2 1 dataset
ChIP WTC11 ENCFF166TKT 476 bp overlap
MYF5 1 dataset
Motif ES_0h ES_0h-MYF5_MA1641.2 8 bp overlap
MYF6 1 dataset
Motif ES_0h ES_0h-MYF6_MA0667.1 10 bp overlap
MYOD1 2 datasets
Motif ES_0h ES_0h-MYOD1_MA0499.3 9 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 221 bp overlap
MYOG 1 dataset
Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 243 bp overlap
ChIP H1 ENCFF747ZPQ 213 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 534 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 534 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 433 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 534 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 514 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 511 bp overlap
ChIP hESC GSE20650.NANOG.hESC 384 bp overlap
ChIP hESC GSE18292.NANOG.hESC 282 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 97 bp overlap
ChIP MRC-5_N_05DPT GSE75910.NEUROG2.MRC-5_N_05DPT 134 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NFYB 3 datasets
Motif DE_12h DE_12h-NFYB_MA0502.3 9 bp overlap
Motif ES_0h ES_0h-NFYB_MA0502.3 9 bp overlap
ChIP WTC11 ENCFF751ZTQ 294 bp overlap
NHLH1 1 dataset
Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif ES_0h ES_0h-NHLH2_MA1529.2 16 bp overlap
NIPBL 4 datasets
ChIP hESC GSE64758.NIPBL.hESC 252 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 248 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 367 bp overlap
ChIP hESC_activin GSE64758.NIPBL.hESC_activin 247 bp overlap
NKX2-4 1 dataset
Motif ES_0h ES_0h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif ES_0h ES_0h-NKX2-8_MA0673.2 8 bp overlap
NR4A1 2 datasets
Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap
Motif ES_0h ES_0h-NR4A1_MA1112.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
Nkx2-1 1 dataset
Motif ES_0h ES_0h-Nkx2-1_MA1994.2 7 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
Olig2 1 dataset
Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap
POLR2A 1 dataset
ChIP body of pancreas ENCFF727UBE 395 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 534 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 534 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 422 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 297 bp overlap
PRDM9 1 dataset
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Pgr 1 dataset
Motif ES_0h ES_0h-Pgr_MA2323.1 17 bp overlap
Ptf1A 2 datasets
Motif ES_0h ES_0h-Ptf1A_MA1619.2 8 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1620.2 8 bp overlap
RAD21 1 dataset
ChIP H1 ENCFF698EWO 241 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 229 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 222 bp overlap
RBPJ 1 dataset
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
Runx1 2 datasets
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
Motif ES_0h ES_0h-Runx1_MA0002.3 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 240 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 170 bp overlap
SCRT1 2 datasets
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
Motif ES_0h ES_0h-SCRT1_MA0743.3 10 bp overlap
SCRT2 2 datasets
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
Motif ES_0h ES_0h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 326 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 142 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 211 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 534 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 470 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 257 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 372 bp overlap
SMARCC1 4 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 177 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 419 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 350 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 429 bp overlap
SNAI1 1 dataset
Motif ES_0h ES_0h-SNAI1_MA1558.2 7 bp overlap
SNAI3 1 dataset
Motif ES_0h ES_0h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 198 bp overlap
SOX2 6 datasets
ChIP H9 GSE46837.SOX2.H9 246 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 176 bp overlap
ChIP hESC GSE69479.SOX2.hESC 274 bp overlap
ChIP hESC GSE18292.SOX2.hESC 168 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 390 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 312 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 426 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 292 bp overlap
SP5 1 dataset
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
Motif ES_0h ES_0h-SREBF1_MA0595.1 10 bp overlap
Sox17 1 dataset
Motif ES_0h ES_0h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
Stat2 3 datasets
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
Motif ES_0h ES_0h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 315 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 225 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 396 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 142 bp overlap
TBP 1 dataset
ChIP hiPSC_WTa_RNase-neg GSE128135.TBP.hiPSC_WTa_RNase-neg 282 bp overlap
TBX5 1 dataset
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
Motif ES_0h ES_0h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 251 bp overlap
TCF3 2 datasets
Motif ES_0h ES_0h-TCF3_MA0522.4 7 bp overlap
ChIP NPC GSE154479.TCF3.NPC 523 bp overlap
TCF4 1 dataset
Motif ES_0h ES_0h-TCF4_MA0830.3 8 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
TFAP4 1 dataset
Motif ES_0h ES_0h-TFAP4_MA0691.1 10 bp overlap
THAP1 1 dataset
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
TRERF1 1 dataset
ChIP WTC11 ENCFF113BUM 245 bp overlap
Tcf12 1 dataset
Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap
Tcf21 1 dataset
Motif ES_0h ES_0h-Tcf21_MA0832.2 10 bp overlap
Twist2 1 dataset
Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 337 bp overlap
ZBED4 2 datasets
Motif DE_12h DE_12h-ZBED4_MA2328.1 10 bp overlap
Motif ES_0h ES_0h-ZBED4_MA2328.1 10 bp overlap
ZBTB43 1 dataset
ChIP WTC11 ENCFF058JUB 455 bp overlap
ZEB1 1 dataset
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 436 bp overlap
ZKSCAN3 2 datasets
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
Motif ES_0h ES_0h-ZKSCAN3_MA1973.2 14 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF143 1 dataset
Motif ES_0h ES_0h-ZNF143_MA0088.2 16 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 366 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 365 bp overlap
ZNF281 1 dataset
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 208 bp overlap
ZNF317 2 datasets
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 190 bp overlap
ZNF454 2 datasets
Motif DE_12h DE_12h-ZNF454_MA1712.2 17 bp overlap
Motif ES_0h ES_0h-ZNF454_MA1712.2 17 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 524 bp overlap
ZNF528 1 dataset
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF667 2 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF701 2 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif ES_0h ES_0h-ZNF701_MA1987.2 17 bp overlap
ZNF707 1 dataset
Motif ES_0h ES_0h-ZNF707_MA1715.1 15 bp overlap
ZNF76 1 dataset
Motif ES_0h ES_0h-ZNF76_MA1716.2 17 bp overlap
ZNF766 2 datasets
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
Motif ES_0h ES_0h-ZNF766_MA2098.1 9 bp overlap
Znf423 1 dataset
Motif ES_0h ES_0h-Znf423_MA0116.1 15 bp overlap