chr10 : 124,454,050 124,454,394
344 bp 94 TFs 3 linked genes
This 344 bp open chromatin element is linked to NKX1-2, ENSG00000271434, and LHPP and is bound by 94 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
NKX1-2 4.0 kb Proximal Proximity
ENSG00000271434 6.3 kb Proximal Proximity
LHPP 7.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:124,449,050 – 124,459,394
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 1 dataset
ChIP 22Rv1_pLKO GSE109748.AR.22Rv1_pLKO 92 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 337 bp overlap
ChIP K562 ENCFF938UXQ 299 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 171 bp overlap
BCL11A 6 datasets
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 53 bp overlap
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 119 bp overlap
ChIP CD34_Day9_60min GSE104676.BCL11A.CD34_Day9_60min 109 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 148 bp overlap
ChIP HUDEP-2_30min GSE104676.BCL11A.HUDEP-2_30min 120 bp overlap
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 181 bp overlap
BCOR 4 datasets
ChIP WA01 GSE104690.BCOR.WA01 120 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 165 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 125 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 61 bp overlap
BRD4 1 dataset
ChIP NMC24335 GSE96775.BRD4.NMC24335 344 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 303 bp overlap
ChIP K562 ENCFF963TXY 236 bp overlap
CBFA2T3 3 datasets
ChIP K-562 GSE142227.CBFA2T3.K-562 306 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 344 bp overlap
ChIP K562 ENCFF673OEZ 311 bp overlap
CCNT2 1 dataset
ChIP K-562 ENCSR000DOA.CCNT2.K-562 151 bp overlap
CEBPB 5 datasets
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 253 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 321 bp overlap
ChIP K562 ENCFF189VBN 140 bp overlap
ChIP K562 ENCFF194QGF 189 bp overlap
ChIP K562 ENCFF584CTB 344 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 325 bp overlap
CREB1 1 dataset
ChIP K-562 ENCSR000BSO.CREB1.K-562 142 bp overlap
CREM 1 dataset
ChIP K-562 ENCSR077DKV.CREM.K-562 130 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 174 bp overlap
CUX1 4 datasets
ChIP K-562 ENCSR000EFO.CUX1.K-562 213 bp overlap
ChIP K-562 GSE92882.CUX1.K-562 183 bp overlap
ChIP K-562_shCUX1-A GSE92882.CUX1.K-562_shCUX1-A 183 bp overlap
ChIP K562 ENCFF057AIX 258 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 344 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 217 bp overlap
DPF2 2 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 215 bp overlap
ChIP K562 ENCFF775HUO 222 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 169 bp overlap
EP300 4 datasets
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 133 bp overlap
ChIP K-562 ENCSR000EGE.EP300.K-562 259 bp overlap
ChIP K562 ENCFF226VMS 228 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 335 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 236 bp overlap
EZH2 6 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 268 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 225 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 308 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 164 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 199 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 344 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 344 bp overlap
ChIP DE DE-FOXA2-2 344 bp overlap
FOXM1 2 datasets
ChIP K-562 ENCSR429QPP.FOXM1.K-562 190 bp overlap
ChIP K562 ENCFF255RHV 262 bp overlap
GATA1 16 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 248 bp overlap
ChIP CD34_Day9_30min GSE104676.GATA1.CD34_Day9_30min 119 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 221 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 215 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 213 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 264 bp overlap
ChIP K-562 ENCSR000EWM.GATA1.K-562 216 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 182 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.GATA1.K-562_MYO1D-Non-hub_KO 205 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 269 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 288 bp overlap
ChIP K562 ENCFF094CMK 191 bp overlap
ChIP erythroblast ENCFF867JAR 337 bp overlap
ChIP erythroblast ENCFF867JAR 177 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 344 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 52 bp overlap
GATA2 8 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 160 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 344 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 193 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 218 bp overlap
ChIP K562 ENCFF513FTZ 242 bp overlap
ChIP K562 ENCFF544PCK 217 bp overlap
ChIP K562 ENCFF830LLA 344 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 344 bp overlap
GATA3 1 dataset
ChIP T-47D ENCSR000BMX.GATA3.T-47D 243 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 344 bp overlap
ChIP DE DE-GATA4-2 344 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 287 bp overlap
ChIP foregut GSE117136.GATA4.foregut 344 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 214 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 344 bp overlap
ChIP DE DE-GATA6-2 344 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 344 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 344 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 344 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 344 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 344 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 344 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 344 bp overlap
ChIP foregut GSE117136.GATA6.foregut 282 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 183 bp overlap
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 149 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 222 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 179 bp overlap
ChIP K-562 ENCSR000BMG.HDAC2.K-562 133 bp overlap
ChIP K562 ENCFF744ALD 307 bp overlap
HOXA9 1 dataset
ChIP HEK293-FT GSE62586.HOXA9.HEK293-FT 135 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 344 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 129 bp overlap
KDM1A 5 datasets
ChIP K-562 GSE117944.KDM1A.K-562 149 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 197 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 223 bp overlap
ChIP K562 ENCFF128TYE 290 bp overlap
ChIP K562 ENCFF133OLU 285 bp overlap
KLF1 1 dataset
ChIP erythroid_R3R4 GSE43625.KLF1.erythroid_R3R4 122 bp overlap
KLF16 2 datasets
ChIP K-562 ENCSR760UVO.KLF16.K-562 261 bp overlap
ChIP K562 ENCFF464PIV 280 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 252 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 344 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 205 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR113LAS.MTA2.K-562 226 bp overlap
ChIP K562 ENCFF880VZB 150 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 175 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 99 bp overlap
ChIP H1 ENCFF747ZPQ 112 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 254 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 164 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 77 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 344 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 340 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 307 bp overlap
ChIP hESC GSE20650.NANOG.hESC 109 bp overlap
ChIP hESC GSE18292.NANOG.hESC 51 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 243 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 234 bp overlap
ChIP K562 ENCFF788MPU 174 bp overlap
ChIP K562 ENCFF866HRM 207 bp overlap
NFE2 1 dataset
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 60 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 239 bp overlap
ChIP K562 ENCFF167YID 197 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 155 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 344 bp overlap
ChIP K562 ENCFF004YPK 303 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 164 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 163 bp overlap
ONECUT1 2 datasets
ChIP H9 ERP004206.ONECUT1.H9 233 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 322 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 210 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 79 bp overlap
PML 2 datasets
ChIP K-562 ENCSR000BQY.PML.K-562 310 bp overlap
ChIP K562 ENCFF801LKH 161 bp overlap
POLR2A 2 datasets
ChIP K562 ENCFF514URW 144 bp overlap
ChIP neural cell ENCFF604SPB 310 bp overlap
POU5F1 8 datasets
ChIP GM23338 ENCFF333SNB 132 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 221 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 251 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 116 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 94 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 255 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 189 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 51 bp overlap
RCOR1 2 datasets
ChIP K-562 ENCSR000EGC.RCOR1.K-562 147 bp overlap
ChIP K562 ENCFF216EEJ 253 bp overlap
RNF2 3 datasets
ChIP K-562 ENCSR076YPO.RNF2.K-562 176 bp overlap
ChIP K562 ENCFF653BQJ 344 bp overlap
ChIP K562 ENCFF653BQJ 274 bp overlap
SMAD2 1 dataset
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 260 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 344 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 344 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 276 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 262 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 264 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 302 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 278 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 331 bp overlap
ChIP K562 ENCFF506JCB 309 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 99 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 215 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 283 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 122 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 146 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 329 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 157 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 344 bp overlap
ChIP K562 ENCFF059YCJ 110 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 79 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5062 GSE126004.STAT3.T-47D_JC5062 169 bp overlap
STAT5A 2 datasets
ChIP K-562 ENCSR000BRR.STAT5A.K-562 224 bp overlap
ChIP K562 ENCFF226BTJ 253 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 344 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 268 bp overlap
TAL1 16 datasets
ChIP CD34 GSE52924.TAL1.CD34 203 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 155 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 290 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 294 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 344 bp overlap
ChIP K-562_MYO1D-Hub_KO GSE107726.TAL1.K-562_MYO1D-Hub_KO 194 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 254 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 226 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 235 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 246 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 253 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 269 bp overlap
ChIP K562 ENCFF620GMX 258 bp overlap
ChIP K562 ENCFF661CCK 229 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 257 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 185 bp overlap
TBL1XR1 2 datasets
ChIP K-562 ENCSR000EGB.TBL1XR1.K-562 189 bp overlap
ChIP K562 ENCFF899VEC 235 bp overlap
TCF12 4 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 262 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 210 bp overlap
ChIP K562 ENCFF909RDY 279 bp overlap
ChIP K562 ENCFF931DJY 225 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 238 bp overlap
ChIP K562 ENCFF319QZT 207 bp overlap
TCF7 1 dataset
ChIP K-562 ENCSR863KUB.TCF7.K-562 119 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 166 bp overlap
TEAD4 4 datasets
ChIP H1 ENCFF778PAX 108 bp overlap
ChIP Ishikawa ENCFF772OTG 143 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 106 bp overlap
ChIP K562 ENCFF673NIK 235 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 52 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 145 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 111 bp overlap
TRIM24 4 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 242 bp overlap
ChIP K-562 ENCSR957LDM.TRIM24.K-562 188 bp overlap
ChIP K562 ENCFF284DKY 255 bp overlap
ChIP K562 ENCFF616RIL 344 bp overlap
TRIM28 2 datasets
ChIP K-562 ENCSR000BRW.TRIM28.K-562 251 bp overlap
ChIP K562 ENCFF172UPN 292 bp overlap
YAP1 1 dataset
ChIP WA01 GSE99202.YAP1.WA01 116 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 98 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 200 bp overlap
ZEB2 2 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 196 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 232 bp overlap
ZMIZ1 1 dataset
ChIP K-562 ENCSR000EFQ.ZMIZ1.K-562 196 bp overlap
ZNF384 2 datasets
ChIP K-562 ENCSR000EFP.ZNF384.K-562 86 bp overlap
ChIP K562 ENCFF365NXQ 83 bp overlap