chr1 : 182,671,951 182,672,683
732 bp 106 TFs 1 linked gene
This 732 bp open chromatin element is linked to RGS8 and is bound by 106 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RGS8 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:182,666,951 – 182,677,683
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
106 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 152 bp overlap
ASCL1 3 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 154 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 165 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 374 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 229 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 462 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 353 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 193 bp overlap
BRD4 13 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 135 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 210 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 232 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 649 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 497 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 732 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 732 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 307 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 86 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 668 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 231 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 271 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 313 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 315 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 158 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 137 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 89 bp overlap
CTCF 51 datasets
ChIP B-cell ENCSR000AUV.CTCF.B-cell 221 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 233 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 334 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 345 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 306 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 237 bp overlap
ChIP GM12864 ENCFF357DQE 285 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 230 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 247 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 284 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 212 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 116 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 125 bp overlap
ChIP GM12873 ENCFF711LOS 285 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 164 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 181 bp overlap
ChIP GM23338 ENCFF531QOI 356 bp overlap
ChIP GM23338 ENCFF531QOI 156 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 303 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 210 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 68 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 106 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 265 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 137 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 239 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 152 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 232 bp overlap
ChIP SK-N-SH ENCFF731NJX 251 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 164 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 150 bp overlap
ChIP brain ENCFF685VRG 288 bp overlap
ChIP brain ENCFF685VRG 85 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 194 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 157 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 161 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 133 bp overlap
ChIP endodermal cell ENCFF471YCZ 187 bp overlap
ChIP gastroesophageal sphincter ENCFF918KPI 337 bp overlap
ChIP gastroesophageal-sphincter ENCSR186NVR.CTCF.gastroesophageal-sphincter 257 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 263 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 393 bp overlap
ChIP heart left ventricle ENCFF505HGD 425 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 500 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 732 bp overlap
ChIP neural cell ENCFF335ADI 288 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 404 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 165 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 372 bp overlap
ChIP retina_AB1-RB GSE86981.CTCF.retina_AB1-RB 151 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 279 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 577 bp overlap
CTCF_s 1 dataset
ChIP HeLa-S3_biotin GSE108869.CTCF_s.HeLa-S3_biotin 154 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 287 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 137 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 71 bp overlap
EOMES 4 datasets
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 136 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 377 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 721 bp overlap
ESR1 8 datasets
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 63 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 120 bp overlap
ChIP MCF-7_E2 GSE117941.ESR1.MCF-7_E2 96 bp overlap
ChIP MCF-7_G6274 GSE117941.ESR1.MCF-7_G6274 139 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 294 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 311 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 233 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 55 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 523 bp overlap
EZH2 4 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 531 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 502 bp overlap
ChIP T98G GSE112240.EZH2.T98G 196 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 263 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 350 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 234 bp overlap
GATA1 1 dataset
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 327 bp overlap
GATA1::TAL1 2 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_24h DE_24h-GATA1TAL1_MA0140.3 17 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 405 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 301 bp overlap
ChIP SK-N-SH ENCFF764OZD 417 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 170 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 428 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-2 408 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 293 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 526 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 417 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 343 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 226 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 356 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 258 bp overlap
HAND2 2 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 263 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 241 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 55 bp overlap
KLF17 1 dataset
Motif DE_24h DE_24h-KLF17_MA1514.2 14 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 58 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 558 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 458 bp overlap
MAZ 2 datasets
ChIP HEK293 ENCFF994GSG 532 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 201 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 176 bp overlap
MGA 2 datasets
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
Motif DE_24h DE_24h-MGA_MA0801.1 8 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 250 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 432 bp overlap
MYCN 4 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 235 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 234 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 147 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 198 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 206 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 211 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 312 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 235 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
OSR2 1 dataset
ChIP HEK293 GSE76494.OSR2.HEK293 147 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 269 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 555 bp overlap
POLR2A 1 dataset
ChIP thyroid gland ENCFF979LRR 85 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 160 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 177 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 397 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 440 bp overlap
PRDM1 2 datasets
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 93 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 503 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 268 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 399 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 123 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 128 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 423 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 300 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 246 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 353 bp overlap
SMARCA4 3 datasets
ChIP MCF-7 GSE123284.SMARCA4.MCF-7 239 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 340 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 324 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 191 bp overlap
SOX15 1 dataset
Motif DE_12h DE_12h-SOX15_MA1152.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 237 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 286 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 220 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
Motif DE_24h DE_24h-SREBF1_MA0595.1 10 bp overlap
SREBF2 2 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_24h DE_24h-SREBF2_MA0596.1 10 bp overlap
SRSF3 2 datasets
ChIP K-562 GSE120104.SRSF3.K-562 235 bp overlap
ChIP K-562 ENCSR268QIQ.SRSF3.K-562 202 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TBX1 3 datasets
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
Motif DE_24h DE_24h-TBX1_MA0805.1 8 bp overlap
TBX15 2 datasets
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
Motif DE_24h DE_24h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 405 bp overlap
TBX20 2 datasets
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX21 3 datasets
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
Motif DE_24h DE_24h-TBX21_MA0690.3 10 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 390 bp overlap
TBX5 6 datasets
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
Motif DE_24h DE_24h-TBX5_MA0807.1 8 bp overlap
ChIP G296S GSE85628.TBX5.G296S 266 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 266 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 190 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 314 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 151 bp overlap
TEAD4 1 dataset
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 224 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 80 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 226 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 203 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 392 bp overlap
ZNF140 1 dataset
Motif DE_12h DE_12h-ZNF140_MA1589.2 19 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 66 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 198 bp overlap
ZNF410 2 datasets
Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap
Motif DE_24h DE_24h-ZNF410_MA0752.2 16 bp overlap
ZNF547 1 dataset
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
ZNF558 2 datasets
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Motif DE_24h DE_24h-ZNF558_MA2335.1 29 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 54 bp overlap
ZNF684 1 dataset
Motif DE_12h DE_12h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
ZNF768 1 dataset
Motif DE_24h DE_24h-ZNF768_MA1731.2 9 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 230 bp overlap