chr1 : 176,801,114 176,802,216
1,102 bp 113 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 113 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:176,796,114 – 176,807,216
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
AR 5 datasets
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 189 bp overlap
ChIP prostate GSE56288.AR.prostate 293 bp overlap
ChIP prostate_1816_T GSE130408.AR.prostate_1816_T 187 bp overlap
ChIP prostate_4024_T GSE130408.AR.prostate_4024_T 271 bp overlap
ChIP prostate_P27 GSE130408.AR.prostate_P27 401 bp overlap
ARRB1 1 dataset
ChIP prostate GSE55615.ARRB1.prostate 133 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 400 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 201 bp overlap
BRD4 5 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 679 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 264 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 160 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 906 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 629 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 240 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 87 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 226 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 145 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 472 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 327 bp overlap
DDX5 1 dataset
ChIP NTERA2 GSE58641.DDX5.NTERA2 135 bp overlap
Dux 1 dataset
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 243 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 161 bp overlap
EP300 3 datasets
ChIP neural ENCSR843ZUP.EP300.neural 1024 bp overlap
ChIP neural cell ENCFF442QNK 327 bp overlap
ChIP neural cell ENCFF442QNK 245 bp overlap
ESR1 2 datasets
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 223 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 350 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 248 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
EZH2 4 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 303 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 312 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 311 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 295 bp overlap
FOS 2 datasets
Motif DE_12h DE_12h-FOS_MA0476.2 8 bp overlap
ChIP leiomyoma_PT886 GSE128230.FOS.leiomyoma_PT886 190 bp overlap
FOSL1 1 dataset
Motif DE_12h DE_12h-FOSL1_MA0477.3 9 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
FOXF2 1 dataset
Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap
FOXK1 1 dataset
Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap
FOXK2 1 dataset
Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap
FOXL1 1 dataset
Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap
FOXO4 1 dataset
Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap
FOXO6 1 dataset
Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap
FOXP2 1 dataset
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
FOXP3 1 dataset
Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap
Foxf1 1 dataset
Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap
Foxj3 1 dataset
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Foxn1 1 dataset
Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap
Foxo1 1 dataset
Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap
Foxo3 1 dataset
Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap
GATA2 1 dataset
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 171 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 731 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 767 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 779 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 239 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 833 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 763 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 149 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 241 bp overlap
GTF2B 1 dataset
ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 140 bp overlap
Hnf1A 1 dataset
Motif DE_12h DE_12h-Hnf1A_MA1991.2 10 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
JUN 7 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 946 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 406 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 965 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 960 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 374 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 1029 bp overlap
ChIP leiomyoma_PT886 GSE128230.JUN.leiomyoma_PT886 118 bp overlap
JUNB 1 dataset
Motif DE_12h DE_12h-JUNB_MA0490.3 9 bp overlap
JUND 1 dataset
Motif DE_12h DE_12h-JUND_MA0491.3 9 bp overlap
Jun 1 dataset
Motif DE_12h DE_12h-Jun_MA0489.3 8 bp overlap
KLF17 1 dataset
Motif DE_12h DE_12h-KLF17_MA1514.2 14 bp overlap
Lef1 1 dataset
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 442 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 247 bp overlap
MED1 7 datasets
ChIP G296S GSE85628.MED1.G296S 150 bp overlap
ChIP G296S_2 GSE85628.MED1.G296S_2 150 bp overlap
ChIP G296S_4 GSE85628.MED1.G296S_4 289 bp overlap
ChIP G296S_4 GSE85628.MED1.G296S_4 537 bp overlap
ChIP LNCaP_Veh GSE125245.MED1.LNCaP_Veh 115 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 302 bp overlap
ChIP cardiomyocyte_7 GSE85628.MED1.cardiomyocyte_7 428 bp overlap
MED12 5 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 68 bp overlap
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 193 bp overlap
ChIP myometrium_PT886 GSE128230.MED12.myometrium_PT886 74 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 218 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 85 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 192 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 195 bp overlap
NKX2-3 1 dataset
Motif DE_12h DE_12h-NKX2-3_MA0672.2 8 bp overlap
NKX2-4 1 dataset
Motif DE_12h DE_12h-NKX2-4_MA2003.2 8 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 271 bp overlap
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 407 bp overlap
NKX2-8 1 dataset
Motif DE_12h DE_12h-NKX2-8_MA0673.2 8 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 180 bp overlap
Nkx2-1 1 dataset
Motif DE_12h DE_12h-Nkx2-1_MA1994.2 7 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PGR 1 dataset
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 713 bp overlap
POLR2A 4 datasets
ChIP neural cell ENCFF604SPB 299 bp overlap
ChIP neural cell ENCFF604SPB 116 bp overlap
ChIP neural cell ENCFF604SPB 227 bp overlap
ChIP suprapubic skin ENCFF748PRQ 277 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_PPARG_HYPO GSE50144.PPARG.HUVEC-C_PPARG_HYPO 209 bp overlap
PRDM9 3 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 3 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 407 bp overlap
ChIP neural cell ENCFF564MOT 420 bp overlap
ChIP neural cell ENCFF564MOT 505 bp overlap
RBPJ 2 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 1061 bp overlap
ChIP neural cell ENCFF882LXX 943 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 955 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 867 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 284 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 915 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 952 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 231 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 755 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 241 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 643 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 333 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 468 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 439 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 572 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 311 bp overlap
SMC3 2 datasets
ChIP neural cell ENCFF795YGY 531 bp overlap
ChIP neural cell ENCFF795YGY 531 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 294 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 135 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 199 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Stat5b 1 dataset
Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap
TBX5 8 datasets
ChIP G296S GSE85628.TBX5.G296S 156 bp overlap
ChIP G296S GSE85628.TBX5.G296S 199 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 156 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 199 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 394 bp overlap
ChIP G296S_4 GSE85628.TBX5.G296S_4 184 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 170 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 192 bp overlap
TCF7 1 dataset
Motif DE_12h DE_12h-TCF7_MA0769.3 7 bp overlap
TCF7L1 1 dataset
Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 205 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 61 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZIC5 1 dataset
Motif DE_12h DE_12h-ZIC5_MA1584.2 15 bp overlap
ZNF189 1 dataset
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
ZNF24 1 dataset
Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF317 1 dataset
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap