chr6 : 143,969,116 – 143,969,594
478 bp 98 TFs 1 linked gene
This 478 bp open chromatin element is linked to PLAGL1 and is bound by 98 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PLAGL1 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:143,964,116 – 143,974,594
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 289 bp overlap
ARID5B 1 dataset
ChIP Jurkat GSE97512.ARID5B.Jurkat 200 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 266 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 315 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BIP.BCL11A.WA01 147 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 316 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 311 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 247 bp overlap
BRD4 6 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 106 bp overlap
ChIP Jurkat GSE83777.BRD4.Jurkat 298 bp overlap
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 478 bp overlap
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 175 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 132 bp overlap
ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 179 bp overlap
Bcl11B 1 dataset
Motif DE_36h DE_36h-Bcl11B_MA1989.2 9 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 239 bp overlap
ChIP K562 ENCFF963TXY 348 bp overlap
CBFA2T3 3 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 372 bp overlap
ChIP K-562 GSE142227.CBFA2T3.K-562 145 bp overlap
ChIP K562 ENCFF673OEZ 267 bp overlap
CDK7 2 datasets
ChIP Jurkat GSE50622.CDK7.Jurkat 157 bp overlap
ChIP Jurkat GSE83777.CDK7.Jurkat 206 bp overlap
CDK9 2 datasets
ChIP MOLT-4_DMSO GSE79288.CDK9.MOLT-4_DMSO 379 bp overlap
ChIP MOLT-4_JQ1 GSE79288.CDK9.MOLT-4_JQ1 359 bp overlap
CREB1 1 dataset
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 170 bp overlap
DPF2 1 dataset
ChIP K-562 ENCSR219BXP.DPF2.K-562 201 bp overlap
EGR1 2 datasets
ChIP H1 ENCFF451BLH 247 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 159 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 186 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 278 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 222 bp overlap
ERG 2 datasets
ChIP Jurkat GSE49091.ERG.Jurkat 287 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 177 bp overlap
ETS1 5 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 386 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 461 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 409 bp overlap
ChIP THP-6_shEts1 GSE138516.ETS1.THP-6_shEts1 390 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 176 bp overlap
EZH2 5 datasets
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 311 bp overlap
ChIP H1 ENCFF232NZA 207 bp overlap
ChIP H1 ENCFF232NZA 478 bp overlap
ChIP Jurkat GSE147198.EZH2.Jurkat 323 bp overlap
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 415 bp overlap
FLI1 2 datasets
ChIP CTV-1_DSG GSE128835.FLI1.CTV-1_DSG 361 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 411 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 295 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 140 bp overlap
GATA1 5 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 209 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 130 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 199 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 458 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 228 bp overlap
GATA2 7 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 307 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 146 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 216 bp overlap
ChIP K562 ENCFF088XQT 347 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 347 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.GATA2.SKH1_RUNX1-EVI1_KD 253 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 423 bp overlap
GATA3 6 datasets
ChIP CCRF-CEM GSE33850.GATA3.CCRF-CEM 185 bp overlap
ChIP Jurkat GSE120063.GATA3.Jurkat 431 bp overlap
ChIP Jurkat GSE29180.GATA3.Jurkat 403 bp overlap
ChIP Jurkat GSE76181.GATA3.Jurkat 364 bp overlap
ChIP Jurkat GSE68976.GATA3.Jurkat 339 bp overlap
ChIP thymocyte GSE71751.GATA3.thymocyte 208 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 406 bp overlap
ChIP DE DE-GATA4-2 478 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 398 bp overlap
ChIP DE DE-GATA6-2 473 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 478 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 478 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 478 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 400 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 478 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 312 bp overlap
GTF2I 1 dataset
ChIP WTC11 ENCFF255XXZ 345 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 478 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 223 bp overlap
HDAC6 2 datasets
ChIP H1 ENCFF799IKG 151 bp overlap
ChIP WA01 ENCSR000ATQ.HDAC6.WA01 203 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 193 bp overlap
IRF7 1 dataset
Motif DE_36h DE_36h-IRF7_MA0772.2 13 bp overlap
JARID2 3 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 217 bp overlap
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 105 bp overlap
ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 203 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 168 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 242 bp overlap
JUND 2 datasets
ChIP H1 ENCFF468JZD 231 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 151 bp overlap
KDM1A 5 datasets
ChIP H1 ENCFF696SGD 252 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 202 bp overlap
ChIP Kasumi-1_DMSO GSE71739.KDM1A.Kasumi-1_DMSO 215 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 232 bp overlap
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 307 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 121 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 160 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 192 bp overlap
LMO1 1 dataset
ChIP Jurkat GSE94391.LMO1.Jurkat 364 bp overlap
LMO2 2 datasets
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 279 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 209 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 192 bp overlap
MEF2D 1 dataset
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
MYB 5 datasets
ChIP DU528 GSE94000.MYB.DU528 478 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 406 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 411 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 304 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 339 bp overlap
MYC 1 dataset
ChIP Jurkat GSE83777.MYC.Jurkat 268 bp overlap
MYCN 1 dataset
ChIP CHP-134 GSE129588.MYCN.CHP-134 327 bp overlap
NANOG 10 datasets
ChIP GM23338 ENCFF065NZG 226 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 168 bp overlap
ChIP H1 ENCFF747ZPQ 210 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 376 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 254 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 225 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 350 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 306 bp overlap
ChIP hESC GSE20650.NANOG.hESC 177 bp overlap
NIPBL 1 dataset
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 182 bp overlap
NOTCH1 2 datasets
ChIP HPBALL GSE39263.NOTCH1.HPBALL 249 bp overlap
ChIP THP-6_shCtrl GSE138516.NOTCH1.THP-6_shCtrl 352 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 185 bp overlap
Nr2e3 1 dataset
Motif DE_36h DE_36h-Nr2e3_MA0164.2 6 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 245 bp overlap
PLAG1 1 dataset
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
PML 1 dataset
ChIP K-562 ENCSR000BQY.PML.K-562 215 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 202 bp overlap
ChIP H1 ENCFF833NJP 283 bp overlap
ChIP K562 ENCFF514URW 343 bp overlap
POU5F1 2 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 315 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 380 bp overlap
PRDM14 3 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 350 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 407 bp overlap
ChIP hESC GSE22767.PRDM14.hESC 410 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 244 bp overlap
ChIP K562 ENCFF248CGR 326 bp overlap
RBPJ 2 datasets
ChIP THP-6_shCtrl GSE138516.RBPJ.THP-6_shCtrl 478 bp overlap
ChIP THP-6_shEts1 GSE138516.RBPJ.THP-6_shEts1 296 bp overlap
RNF2 5 datasets
ChIP HUES-64 GSE104059.RNF2.HUES-64 269 bp overlap
ChIP ME-1_KD GSE128771.RNF2.ME-1_KD 272 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 58 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 294 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 147 bp overlap
RUNX1 12 datasets
ChIP AML GSE111917.RUNX1.AML 248 bp overlap
ChIP Jurkat GSE68976.RUNX1.Jurkat 338 bp overlap
ChIP Jurkat GSE76181.RUNX1.Jurkat 323 bp overlap
ChIP Jurkat GSE42575.RUNX1.Jurkat 187 bp overlap
ChIP Jurkat GSE29180.RUNX1.Jurkat 183 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 257 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 314 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 314 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 257 bp overlap
ChIP SKH1 GSE87283.RUNX1.SKH1 210 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 149 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 127 bp overlap
RUNX1-3 1 dataset
ChIP Jurkat GSE17954.RUNX1-3.Jurkat 207 bp overlap
RUNX2 2 datasets
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 318 bp overlap
ChIP PER-117 GSE151819.RUNX2.PER-117 374 bp overlap
RXRA 1 dataset
ChIP WA01 ENCSR000BJW.RXRA.WA01 156 bp overlap
Runx1 1 dataset
Motif DE_36h DE_36h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 478 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 320 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 312 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 355 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 376 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 394 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 478 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 478 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 478 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 478 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 478 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 310 bp overlap
SMARCC1 3 datasets
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 158 bp overlap
ChIP TTC-549_NoDox GSE71504.SMARCC1.TTC-549_NoDox 240 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 226 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 351 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 268 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 238 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 199 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 221 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 310 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 237 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 192 bp overlap
TAL1 11 datasets
ChIP CCRF-CEM GSE33850.TAL1.CCRF-CEM 304 bp overlap
ChIP CD34 GSE52924.TAL1.CD34 144 bp overlap
ChIP Jurkat GSE29180.TAL1.Jurkat 343 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 258 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 118 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 187 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 161 bp overlap
ChIP MOLT-3 GSE59657.TAL1.MOLT-3 393 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 169 bp overlap
ChIP RPMI8402 GSE39179.TAL1.RPMI8402 368 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 229 bp overlap
TAL1_SCL 1 dataset
ChIP erythroid GSE25000.TAL1_SCL.erythroid 266 bp overlap
TCF12 6 datasets
ChIP H1 ENCFF203EBH 221 bp overlap
ChIP Jurkat GSE29180.TCF12.Jurkat 333 bp overlap
ChIP K-562 ENCSR744WOO.TCF12.K-562 251 bp overlap
ChIP ME-1 GSE46044.TCF12.ME-1 218 bp overlap
ChIP RPMI8402 GSE39179.TCF12.RPMI8402 300 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 347 bp overlap
TCF3 5 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 194 bp overlap
ChIP K562 ENCFF319QZT 332 bp overlap
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 338 bp overlap
ChIP NPC GSE154479.TCF3.NPC 268 bp overlap
ChIP RPMI8402 GSE39179.TCF3.RPMI8402 230 bp overlap
TCF4 1 dataset
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 123 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 151 bp overlap
TEAD1 1 dataset
Motif DE_36h DE_36h-TEAD1_MA0090.4 9 bp overlap
TEAD3 1 dataset
Motif DE_36h DE_36h-TEAD3_MA0808.1 8 bp overlap
TEAD4 4 datasets
Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap
Motif DE_36h DE_36h-TEAD4_MA0809.3 8 bp overlap
ChIP H1 ENCFF778PAX 240 bp overlap
ChIP K562 ENCFF673NIK 115 bp overlap
TFE3 1 dataset
ChIP K562 ENCFF697ABG 317 bp overlap
TRIM24 1 dataset
ChIP K-562 ENCSR907MZR.TRIM24.K-562 254 bp overlap
TRIM28 1 dataset
ChIP K-562 ENCSR000BRW.TRIM28.K-562 214 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 308 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 244 bp overlap
ZBTB32 1 dataset
Motif DE_36h DE_36h-ZBTB32_MA1580.1 10 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 478 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZMIZ1 2 datasets
ChIP THP-6_shCtrl GSE138516.ZMIZ1.THP-6_shCtrl 478 bp overlap
ChIP THP-6_shEts1 GSE138516.ZMIZ1.THP-6_shEts1 478 bp overlap
ZNF143 4 datasets
ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 90 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 154 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 204 bp overlap
ChIP WA09_heat-shock GSE105028.ZNF143.WA09_heat-shock 221 bp overlap
ZNF274 3 datasets
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
ChIP H1 ENCFF434LDY 478 bp overlap
ChIP WA01 ENCSR000EUN.ZNF274.WA01 240 bp overlap
ZNF311 2 datasets
ChIP K-562 ENCSR388ZRV.ZNF311.K-562 215 bp overlap
ChIP K562 ENCFF986QSP 340 bp overlap
ZNF316 3 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 291 bp overlap
ChIP K562 ENCFF281INV 228 bp overlap
ChIP K562 ENCFF838QCD 280 bp overlap
ZNF667 1 dataset
Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap
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