chr6 : 41,239,535 41,239,716
181 bp 89 TFs 1 linked gene
This 181 bp open chromatin element is linked to RNA5SP207 and is bound by 89 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RNA5SP207 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:41,234,535 – 41,244,716
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
89 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 100 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 181 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 181 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 181 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 181 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 181 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 156 bp overlap
BRD2 2 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD2.MV4-11_IBET151_500nM 156 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 181 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 179 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 149 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 181 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 142 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 172 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 110 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 181 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 181 bp overlap
CTCF 31 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 175 bp overlap
ChIP GM23338 ENCFF531QOI 181 bp overlap
ChIP H1 ENCFF230QSV 147 bp overlap
ChIP H1 ENCFF414GZI 158 bp overlap
ChIP H1 ENCFF764RHO 181 bp overlap
ChIP H9 ENCFF152GTF 111 bp overlap
ChIP HEK293 ENCFF498RMM 181 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 146 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 96 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 96 bp overlap
ChIP K562 ENCFF111MGE 181 bp overlap
ChIP MCF-7 ENCFF414SZG 176 bp overlap
ChIP MCF-7 ENCFF844STM 126 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 114 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 97 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 99 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 181 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 127 bp overlap
ChIP endodermal cell ENCFF471YCZ 181 bp overlap
ChIP endodermal cell ENCFF471YCZ 113 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 126 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 181 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 143 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 147 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 143 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 181 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 165 bp overlap
ChIP neural progenitor cell ENCFF420RBO 181 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 172 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 151 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 181 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 136 bp overlap
CTNNB1 1 dataset
ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 134 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 181 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 117 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 181 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 141 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 181 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 160 bp overlap
ESR1 11 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 176 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 151 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 85 bp overlap
ChIP MCF-7_E2 GSE60270.ESR1.MCF-7_E2 167 bp overlap
ChIP MCF-7_E2_45m GSE67295.ESR1.MCF-7_E2_45m 181 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 181 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 162 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 181 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 181 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 181 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 181 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 181 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 180 bp overlap
EZH1 1 dataset
ChIP ProEs_SHEZH2 GSE59087.EZH1.ProEs_SHEZH2 181 bp overlap
EZH2 36 datasets
ChIP A-1847 GSE95643.EZH2.A-1847 181 bp overlap
ChIP A-673 ENCSR179SAO.EZH2.A-673 181 bp overlap
ChIP A673 ENCFF790MVL 181 bp overlap
ChIP A673 ENCFF955JRZ 181 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 181 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 181 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 181 bp overlap
ChIP PC-9 ENCFF152BST 181 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 181 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 181 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH2.ProEs_SHCTR 174 bp overlap
ChIP T98G GSE112240.EZH2.T98G 181 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 181 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 181 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 181 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 181 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 181 bp overlap
ChIP fibroblast of lung ENCFF479BAW 181 bp overlap
ChIP fibroblast of lung ENCFF479BAW 148 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 181 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 158 bp overlap
ChIP hepatocyte ENCFF118DKH 181 bp overlap
ChIP hepatocyte ENCFF552DZB 181 bp overlap
ChIP hepatocyte ENCFF552DZB 136 bp overlap
ChIP keratinocyte ENCFF070STK 181 bp overlap
ChIP keratinocyte ENCFF070STK 85 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 181 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 181 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 88 bp overlap
ChIP myotube ENCFF857GWB 181 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 181 bp overlap
ChIP neural progenitor cell ENCFF472NFV 181 bp overlap
ChIP neural progenitor cell ENCFF472NFV 181 bp overlap
ChIP neural_progenitor ENCSR069DPL.EZH2.neural_progenitor 181 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 164 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 181 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 147 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 181 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 181 bp overlap
GTF2F1 2 datasets
ChIP K-562 GSE120104.GTF2F1.K-562 166 bp overlap
ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 153 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 122 bp overlap
HDAC2 3 datasets
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 95 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 181 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 97 bp overlap
HMGN3 2 datasets
ChIP K-562 ENCSR000DOB.HMGN3.K-562 143 bp overlap
ChIP K562 ENCFF083BIJ 181 bp overlap
HNRNPLL 4 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 172 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 171 bp overlap
ChIP HepG2 ENCFF355PIC 181 bp overlap
ChIP HepG2 ENCFF952XAB 181 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 98 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 144 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 181 bp overlap
JUN 1 dataset
ChIP ESC S24-ESC-d0-JUN-exp1 181 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 96 bp overlap
KDM4A 5 datasets
ChIP H1 ENCFF078LED 181 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 181 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 152 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 94 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 141 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 133 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 150 bp overlap
MTF2 2 datasets
ChIP DU145_CTR GSE135623.MTF2.DU145_CTR 181 bp overlap
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 181 bp overlap
MYC 1 dataset
ChIP CD34 GSE85488.MYC.CD34 113 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 170 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 181 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 96 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 181 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 174 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 176 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 122 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 107 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 181 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 181 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 181 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 181 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 181 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 181 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 181 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 181 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 181 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 171 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 120 bp overlap
PTBP1 2 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 181 bp overlap
ChIP Hep-G2 GSE120104.PTBP1.Hep-G2 181 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF967OJF 181 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 181 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 179 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 136 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 181 bp overlap
ChIP H1 ENCFF905HFL 181 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 181 bp overlap
RBM14 1 dataset
ChIP K-562 ENCSR423FCW.RBM14.K-562 181 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 181 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 181 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 181 bp overlap
REST 1 dataset
ChIP K-562 ENCSR000BMW.REST.K-562 55 bp overlap
RNF2 4 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 110 bp overlap
ChIP K-562 ENCSR820GND.RNF2.K-562 181 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 181 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 181 bp overlap
RORC 1 dataset
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 181 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 181 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 136 bp overlap
SMARCA4 1 dataset
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 126 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 181 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 158 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 87 bp overlap
SPI1 1 dataset
ChIP macrophage_IFNG GSE47188.SPI1.macrophage_IFNG 181 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 181 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 181 bp overlap
SUZ12 6 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 132 bp overlap
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 181 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 181 bp overlap
ChIP K562 ENCFF397TBJ 181 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 154 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 181 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 175 bp overlap
ChIP hESC GSE122298.TBP.hESC 151 bp overlap
TFAP2A 1 dataset
ChIP MCF-7_E2 GSE60270.TFAP2A.MCF-7_E2 121 bp overlap
TFAP2C 4 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 135 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 181 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 181 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 100 bp overlap
TP63 2 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 86 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 126 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 173 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BKU.YY1.K-562 81 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 138 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 181 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 181 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 181 bp overlap