chr6 : 1,758,023 – 1,758,695
672 bp 111 TFs 0 linked genes
This 672 bp open chromatin element has no linked target genes and is bound by 111 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:1,753,023 – 1,763,695
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP HeLa_DOX GSE40632.AFF4.HeLa_DOX 176 bp overlap
AR 1 dataset
ChIP LNCaP-abl GSE39459.AR.LNCaP-abl 157 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 239 bp overlap
ATF3 4 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 115 bp overlap
ChIP K-562 ENCSR632DCH.ATF3.K-562 380 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 268 bp overlap
ChIP K562 ENCFF921JQW 167 bp overlap
ATF7 1 dataset
ChIP K-562 ENCSR972ZBV.ATF7.K-562 250 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 270 bp overlap
CCAR2 1 dataset
ChIP K-562 ENCSR598GER.CCAR2.K-562 167 bp overlap
CDK9 1 dataset
ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 181 bp overlap
CEBPB 1 dataset
ChIP IMR-90 ENCFF468UGY 251 bp overlap
CEBPG 4 datasets
ChIP K-562 ENCSR620VIC.CEBPG.K-562 321 bp overlap
ChIP K-562 ENCSR490LWA.CEBPG.K-562 270 bp overlap
ChIP K562 ENCFF783ADE 561 bp overlap
ChIP K562 ENCFF956TPS 480 bp overlap
CTCF 15 datasets
ChIP AG04450 ENCFF116DJL 223 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
Motif DE_60h DE_60h-CTCF_MA1929.2 31 bp overlap
ChIP HEK293 ENCFF821TIC 357 bp overlap
ChIP HEK293 ENCSR617IFZ.CTCF.HEK293 330 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 126 bp overlap
ChIP IMR-90_siRNA GSE125639.CTCF.IMR-90_siRNA 254 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 140 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 95 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 148 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 217 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 182 bp overlap
ChIP endodermal cell ENCFF471YCZ 284 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 251 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 291 bp overlap
Crx 3 datasets
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
Motif DE_72h DE_72h-Crx_MA0467.3 6 bp overlap
Dmbx1 3 datasets
Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_72h DE_72h-Dmbx1_MA0883.2 10 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 362 bp overlap
ETV5::FOXO1 3 datasets
Motif DE_48h DE_48h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_60h DE_60h-ETV5FOXO1_MA1947.2 10 bp overlap
Motif DE_72h DE_72h-ETV5FOXO1_MA1947.2 10 bp overlap
EZH2 1 dataset
ChIP LNCaP GSE39459.EZH2.LNCaP 225 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 441 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 230 bp overlap
FLI1::FOXI1 3 datasets
Motif DE_48h DE_48h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_60h DE_60h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_72h DE_72h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA1 1 dataset
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 230 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 486 bp overlap
ChIP DE DE-FOXA2-2 519 bp overlap
FOXC2 3 datasets
Motif DE_48h DE_48h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXD2 3 datasets
Motif DE_48h DE_48h-FOXD2_MA0847.4 11 bp overlap
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXD3 3 datasets
Motif DE_48h DE_48h-FOXD3_MA0041.3 14 bp overlap
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
FOXE1 3 datasets
Motif DE_48h DE_48h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 185 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 140 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 135 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 370 bp overlap
ChIP DE DE-GATA4-2 461 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 368 bp overlap
ChIP DE DE-GATA6-2 384 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 424 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 333 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 430 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 469 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 579 bp overlap
GRHL1 3 datasets
Motif DE_48h DE_48h-GRHL1_MA0647.2 10 bp overlap
Motif DE_60h DE_60h-GRHL1_MA0647.2 10 bp overlap
Motif DE_72h DE_72h-GRHL1_MA0647.2 10 bp overlap
GRHL2 3 datasets
Motif DE_48h DE_48h-GRHL2_MA1105.3 8 bp overlap
Motif DE_60h DE_60h-GRHL2_MA1105.3 8 bp overlap
Motif DE_72h DE_72h-GRHL2_MA1105.3 8 bp overlap
GSC 3 datasets
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
Motif DE_72h DE_72h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Motif DE_72h DE_72h-GSC2_MA0891.2 6 bp overlap
HNRNPH1 1 dataset
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 180 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 241 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 371 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 274 bp overlap
IRF2BP2 1 dataset
ChIP HEK293 GSE124636.IRF2BP2.HEK293 371 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 366 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 442 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 539 bp overlap
ChIP K-562 ENCSR000FAH.JUN.K-562 94 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 126 bp overlap
MAZ 5 datasets
Motif DE_60h DE_60h-MAZ_MA1522.2 8 bp overlap
Motif DE_72h DE_72h-MAZ_MA1522.2 8 bp overlap
ChIP HEK293 ENCFF994GSG 204 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 355 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 223 bp overlap
MEIS1 3 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 363 bp overlap
ChIP K562 ENCFF320GSD 211 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 225 bp overlap
NEUROG2 2 datasets
Motif DE_36h DE_36h-NEUROG2_MA0669.1 10 bp overlap
Motif DE_60h DE_60h-NEUROG2_MA0669.1 10 bp overlap
NKX2-1 2 datasets
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 472 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 527 bp overlap
NKX2-5 2 datasets
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 380 bp overlap
ChIP hESC_sc-14033 GSE89457.NKX2-5.hESC_sc-14033 244 bp overlap
NR1D2 4 datasets
Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap
Motif DE_48h DE_48h-NR1D2_MA1532.2 15 bp overlap
Motif DE_60h DE_60h-NR1D2_MA1532.2 15 bp overlap
Motif DE_72h DE_72h-NR1D2_MA1532.2 15 bp overlap
NR3C1 1 dataset
ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 74 bp overlap
OLIG1 2 datasets
Motif DE_36h DE_36h-OLIG1_MA0826.1 10 bp overlap
Motif DE_60h DE_60h-OLIG1_MA0826.1 10 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 326 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 430 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 256 bp overlap
OTX1 3 datasets
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
Motif DE_72h DE_72h-OTX1_MA0711.2 6 bp overlap
PATZ1 4 datasets
Motif DE_60h DE_60h-PATZ1_MA1961.2 11 bp overlap
Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap
ChIP HEK293 ENCFF016MNJ 521 bp overlap
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 217 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 177 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 449 bp overlap
ChIP K562 ENCFF286KMN 305 bp overlap
PGR 1 dataset
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 243 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 579 bp overlap
PITX1 3 datasets
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
Motif DE_72h DE_72h-PITX1_MA0682.3 6 bp overlap
PITX2 3 datasets
Motif DE_48h DE_48h-PITX2_MA1547.2 8 bp overlap
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
Motif DE_72h DE_72h-PITX2_MA1547.2 8 bp overlap
PITX3 3 datasets
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
Motif DE_72h DE_72h-PITX3_MA0714.2 6 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 537 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 303 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 199 bp overlap
Plagl1 2 datasets
Motif DE_60h DE_60h-Plagl1_MA1615.2 8 bp overlap
Motif DE_72h DE_72h-Plagl1_MA1615.2 8 bp overlap
Prdm5 2 datasets
Motif DE_36h DE_36h-Prdm5_MA1999.2 11 bp overlap
Motif DE_60h DE_60h-Prdm5_MA1999.2 11 bp overlap
RAD21 2 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 623 bp overlap
ChIP HEK293_siE1A GSE130135.RAD21.HEK293_siE1A 308 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF561IAJ 170 bp overlap
RERE 1 dataset
ChIP K562 ENCFF203AHY 451 bp overlap
RHOXF1 3 datasets
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_72h DE_72h-RHOXF1_MA0719.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 479 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 271 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 186 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 104 bp overlap
SP4 3 datasets
Motif DE_60h DE_60h-SP4_MA0685.2 9 bp overlap
Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap
ChIP HEK293 GSE76494.SP4.HEK293 177 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 368 bp overlap
SPIC 3 datasets
Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap
Motif DE_60h DE_60h-SPIC_MA0687.2 13 bp overlap
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 155 bp overlap
Six3 4 datasets
Motif DE_36h DE_36h-Six3_MA0631.2 11 bp overlap
Motif DE_48h DE_48h-Six3_MA0631.2 11 bp overlap
Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap
Motif DE_72h DE_72h-Six3_MA0631.2 11 bp overlap
TBX18 1 dataset
ChIP K562 ENCFF473CJK 351 bp overlap
TRIM28 5 datasets
ChIP HEK293 ENCFF265CEM 645 bp overlap
ChIP HEK293 ENCFF582MWI 579 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 441 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 390 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 447 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 205 bp overlap
ChIP K562 ENCFF053XDV 169 bp overlap
XRCC5 2 datasets
ChIP K-562 GSE120104.XRCC5.K-562 227 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 170 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 501 bp overlap
ZBTB20 1 dataset
ChIP HEK293 ENCFF524ADK 589 bp overlap
ZBTB21 2 datasets
ChIP HEK293 ENCFF509WYZ 421 bp overlap
ChIP HEK293 ENCSR321MSF.ZBTB21.HEK293 278 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 181 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 146 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 337 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 541 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 614 bp overlap
ZFP69B 1 dataset
ChIP HEK293 ENCSR381VYR.ZFP69B.HEK293 265 bp overlap
ZFX 1 dataset
ChIP HEK293T ENCFF402JZW 450 bp overlap
ZKSCAN1 3 datasets
Motif DE_48h DE_48h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_60h DE_60h-ZKSCAN1_MA1585.2 9 bp overlap
Motif DE_72h DE_72h-ZKSCAN1_MA1585.2 9 bp overlap
ZNF148 3 datasets
Motif DE_60h DE_60h-ZNF148_MA1653.2 10 bp overlap
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ChIP K-562 ENCSR018MSO.ZNF148.K-562 231 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 561 bp overlap
ZNF213 4 datasets
Motif DE_48h DE_48h-ZNF213_MA2121.1 12 bp overlap
Motif DE_60h DE_60h-ZNF213_MA2121.1 12 bp overlap
Motif DE_72h DE_72h-ZNF213_MA2121.1 12 bp overlap
ChIP HEK293 ENCSR295GRB.ZNF213.HEK293 340 bp overlap
ZNF24 1 dataset
ChIP HEK293 ENCSR984MDV.ZNF24.HEK293 232 bp overlap
ZNF263 2 datasets
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF281 2 datasets
Motif DE_60h DE_60h-ZNF281_MA1630.3 10 bp overlap
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 187 bp overlap
ZNF324 2 datasets
Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 184 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 508 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 457 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 248 bp overlap
ZNF518A 1 dataset
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 232 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 329 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 132 bp overlap
ZNF550 2 datasets
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 238 bp overlap
ChIP Hep-G2 ENCSR198BHH.ZNF550.Hep-G2 208 bp overlap
ZNF561 2 datasets
ChIP HEK293 ENCFF399XKF 404 bp overlap
ChIP HEK293 ENCSR125ULS.ZNF561.HEK293 382 bp overlap
ZNF577 1 dataset
ChIP HEK293 ENCSR776MDR.ZNF577.HEK293 393 bp overlap
ZNF629 2 datasets
ChIP HEK293 ENCFF096ELQ 238 bp overlap
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 382 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 188 bp overlap
ZNF692 2 datasets
ChIP HEK293 ENCFF040AZE 501 bp overlap
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 470 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 672 bp overlap
ZSCAN31 2 datasets
Motif DE_60h DE_60h-ZSCAN31_MA1722.2 18 bp overlap
Motif DE_72h DE_72h-ZSCAN31_MA1722.2 18 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 357 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 357 bp overlap
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