chr5 : 124,923,166 124,923,485
319 bp 110 TFs 0 linked genes
This 319 bp open chromatin element has no linked target genes and is bound by 110 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:124,918,166 – 124,928,485
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
110 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast-cancer_ENOB-2854 GSE128018.AR.breast-cancer_ENOB-2854 142 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.AR.prostate-cancer_PDX_70 104 bp overlap
BCL6 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 140 bp overlap
BCL6B 1 dataset
ChIP HEK293 ENCFF555YRB 66 bp overlap
BCOR 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 246 bp overlap
BHLHE40 5 datasets
ChIP GM12878 ENCFF010ZUU 283 bp overlap
ChIP GM12878 ENCFF521IZR 260 bp overlap
ChIP GM12878 ENCSR517QHU.BHLHE40.GM12878 319 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 289 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 141 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 319 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 55 bp overlap
BRD4 17 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 307 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 319 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 64 bp overlap
ChIP MM1-S GSE43743.BRD4.MM1-S 242 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 186 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 268 bp overlap
ChIP Mutu-1_vehicle GSE84213.BRD4.Mutu-1_vehicle 206 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 211 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 143 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 319 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 231 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 297 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 319 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 319 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 247 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 319 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 191 bp overlap
CDK9 1 dataset
ChIP HEK293T_SIBRD4 GSE51633.CDK9.HEK293T_SIBRD4 197 bp overlap
CEBPA 2 datasets
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 112 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 133 bp overlap
CEBPB 4 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 234 bp overlap
ChIP monocyte GSE98367.CEBPB.monocyte 174 bp overlap
ChIP monocyte_IFNg-LPS GSE120943.CEBPB.monocyte_IFNg-LPS 122 bp overlap
ChIP monocyte_INFg GSE98367.CEBPB.monocyte_INFg 228 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 319 bp overlap
CTCF 3 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 228 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 319 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 140 bp overlap
DPF2 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 248 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 191 bp overlap
ELF3 2 datasets
ChIP PDAC GSE64557.ELF3.PDAC 319 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 235 bp overlap
EP300 4 datasets
ChIP neural ENCSR843ZUP.EP300.neural 319 bp overlap
ChIP neural cell ENCFF442QNK 319 bp overlap
ChIP sigmoid colon ENCFF953ZIP 225 bp overlap
ChIP tibial nerve ENCFF346AYA 319 bp overlap
ESR1 3 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 57 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 283 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 319 bp overlap
FEZF1 2 datasets
ChIP HEK293 ENCFF528YED 319 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 319 bp overlap
FOXA1 16 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 194 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 210 bp overlap
ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 213 bp overlap
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 200 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 129 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 319 bp overlap
ChIP LNCaP_1F5 GSE30623.FOXA1.LNCaP_1F5 128 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 207 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 261 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 184 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 155 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 182 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 319 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 319 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 226 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 130 bp overlap
FOXA2 5 datasets
ChIP Caco-2 GSE66218.FOXA2.Caco-2 150 bp overlap
ChIP DE DE-FOXA2-1 319 bp overlap
ChIP DE DE-FOXA2-2 319 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 319 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 319 bp overlap
FOXF1 1 dataset
ChIP GIST48 GSE106624.FOXF1.GIST48 159 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 243 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 184 bp overlap
FOXP1 1 dataset
ChIP SU-DHL-6 ERP010999.FOXP1.SU-DHL-6 243 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 132 bp overlap
GATA2 2 datasets
ChIP TSU-1621MT GSE60477.GATA2.TSU-1621MT 183 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 75 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 319 bp overlap
ChIP DE DE-GATA4-2 319 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 319 bp overlap
ChIP DE DE-GATA6-2 319 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 319 bp overlap
HOXB13 1 dataset
ChIP G-401 GSE65381.HOXB13.G-401 67 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 109 bp overlap
IKZF3 1 dataset
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 319 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 117 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 156 bp overlap
ChIP HAP1 GSE130417.KLF4.HAP1 176 bp overlap
KMT2B 2 datasets
ChIP AML GSE112074.KMT2B.AML 191 bp overlap
ChIP AML_OG86 GSE112074.KMT2B.AML_OG86 214 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 207 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 253 bp overlap
MED1 2 datasets
ChIP OCI-Ly1 GSE53601.MED1.OCI-Ly1 259 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 87 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 103 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 118 bp overlap
MEF2A 2 datasets
ChIP GM12878 ENCFF652BHX 211 bp overlap
ChIP GM12878 ENCSR000BKB.MEF2A.GM12878 147 bp overlap
MEF2B 3 datasets
ChIP DLBCL GSE110682.MEF2B.DLBCL 264 bp overlap
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 306 bp overlap
ChIP tonsil GSE110682.MEF2B.tonsil 314 bp overlap
MEF2C 1 dataset
ChIP GM12878 ENCFF473ASZ 163 bp overlap
MEF2D 1 dataset
ChIP K-562 ENCSR647ZXA.MEF2D.K-562 277 bp overlap
MITF 3 datasets
ChIP 501-mel GSE61965.MITF.501-mel 236 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 215 bp overlap
ChIP melanocyte_CTR GSE50681.MITF.melanocyte_CTR 252 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 319 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 315 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 319 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 319 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 113 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 115 bp overlap
ChIP hESC GSE18292.NANOG.hESC 154 bp overlap
NBN 1 dataset
ChIP GM12878 ENCSR278SQL.NBN.GM12878 205 bp overlap
NEUROD1 2 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 249 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 179 bp overlap
NKRF 1 dataset
ChIP GM12878 ENCFF392NLB 242 bp overlap
OLIG2 4 datasets
ChIP brain-prefrontal-cortex_2016018 GSE129039.OLIG2.brain-prefrontal-cortex_2016018 319 bp overlap
ChIP brain-prefrontal-cortex_2017011 GSE129039.OLIG2.brain-prefrontal-cortex_2017011 319 bp overlap
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 298 bp overlap
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 308 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 319 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 141 bp overlap
POLR2A 6 datasets
ChIP esophagus muscularis mucosa ENCFF759BBR 299 bp overlap
ChIP esophagus muscularis mucosa ENCFF791ZXN 319 bp overlap
ChIP neural cell ENCFF604SPB 288 bp overlap
ChIP sigmoid colon ENCFF101ILL 261 bp overlap
ChIP sigmoid colon ENCFF754JQR 146 bp overlap
ChIP vagina ENCFF305NWS 319 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 319 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 165 bp overlap
PRDM4 1 dataset
ChIP HEK293 ENCFF069PHD 304 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 272 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 319 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 127 bp overlap
RAD21 6 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 319 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 319 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 319 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 204 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 262 bp overlap
ChIP neural cell ENCFF564MOT 151 bp overlap
RAD51 2 datasets
ChIP GM12878 ENCFF916JXQ 319 bp overlap
ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 319 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 55 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 319 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 319 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 319 bp overlap
REST 3 datasets
ChIP hippocampus GSE144226.REST.hippocampus 319 bp overlap
ChIP neural ENCSR000BTV.REST.neural 300 bp overlap
ChIP neural cell ENCFF882LXX 319 bp overlap
RUNX1 2 datasets
ChIP MV4-11 GSE79899.RUNX1.MV4-11 191 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 184 bp overlap
SETDB1 4 datasets
ChIP HEK293 ENCFF676PLV 319 bp overlap
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 210 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 210 bp overlap
ChIP WN8532 GSE36579.SETDB1.WN8532 176 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 319 bp overlap
SMARCA2 4 datasets
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 234 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 216 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 319 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 319 bp overlap
SMARCA4 8 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 110 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 319 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 319 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 85 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 199 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCA4.TTC-549_Dox 164 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 297 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 228 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 319 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 319 bp overlap
ChIP TTC-549_Dox GSE71504.SMARCC1.TTC-549_Dox 253 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 270 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 319 bp overlap
ChIP neural cell ENCFF795YGY 319 bp overlap
SOX10 1 dataset
ChIP 501-mel GSE61965.SOX10.501-mel 319 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 319 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 319 bp overlap
ChIP glioma_stem GSE67282.SOX2.glioma_stem 311 bp overlap
SOX8 2 datasets
ChIP RH4_DMSO-6H GSE116344.SOX8.RH4_DMSO-6H 236 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 157 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 81 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 277 bp overlap
SS18 2 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 319 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 222 bp overlap
STAT1 1 dataset
ChIP CD14_INFG GSE43036.STAT1.CD14_INFG 110 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 201 bp overlap
TRIM24 1 dataset
ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 239 bp overlap
USF2 1 dataset
ChIP GM12878 GSE97661.USF2.GM12878 230 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 144 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 319 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 306 bp overlap
YY2 1 dataset
ChIP HEK293 ENCSR692HSE.YY2.HEK293 169 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 319 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 319 bp overlap
ZNF18 3 datasets
ChIP HEK293 ENCFF066NGR 223 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 319 bp overlap
ChIP HEK293 GSE76494.ZNF18.HEK293 252 bp overlap
ZNF182 1 dataset
ChIP HEK293T GSE78099.ZNF182.HEK293T 50 bp overlap
ZNF260 1 dataset
ChIP HEK293 GSE76494.ZNF260.HEK293 148 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 154 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 173 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 288 bp overlap
ZNF501 3 datasets
ChIP HEK293 ENCFF066RAQ 319 bp overlap
ChIP HEK293 ENCFF066RAQ 235 bp overlap
ChIP HEK293 ENCSR461ZJT.ZNF501.HEK293 319 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 266 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 138 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 139 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCFF233SGE 319 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 267 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 208 bp overlap