chr4 : 109,435,869 – 109,436,805
936 bp 99 TFs 2 linked genes
This 936 bp open chromatin element is linked to SEC24B and SEC24B-AS1 and is bound by 99 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SEC24B 2.1 kb Proximal Proximity
SEC24B-AS1 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:109,430,869 – 109,441,805
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
99 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 152 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 148 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 185 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 183 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 253 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 228 bp overlap
ARID4B 1 dataset
ChIP HepG2 ENCFF519OXJ 239 bp overlap
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 132 bp overlap
ASH2L 1 dataset
ChIP Hep-G2 ENCSR508LMH.ASH2L.Hep-G2 92 bp overlap
ATF3 3 datasets
ChIP liver ENCFF375GID 82 bp overlap
ChIP liver ENCFF867MFZ 161 bp overlap
ChIP liver ENCSR205FOW.ATF3.liver 138 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 188 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 107 bp overlap
ChIP liver ERP002306.CEBPA.liver 86 bp overlap
CEBPB 2 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 174 bp overlap
ChIP K562 ENCFF584CTB 142 bp overlap
CEBPD 1 dataset
ChIP HepG2 ENCFF345JDB 89 bp overlap
CLOCK 1 dataset
ChIP BA40_0 GSE96659.CLOCK.BA40_0 257 bp overlap
CRX 1 dataset
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 294 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 97 bp overlap
ChIP BLaER1 ENCFF364PUR 213 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 71 bp overlap
EGR1 2 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 188 bp overlap
ChIP liver ENCFF130MBW 189 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 114 bp overlap
FOSL2 1 dataset
ChIP HepG2 ENCFF548CXY 170 bp overlap
FOXA1 2 datasets
ChIP HepG2 ENCFF361KNY 85 bp overlap
ChIP liver ENCFF749ERP 99 bp overlap
FOXA2 6 datasets
ChIP DE DE-FOXA2-1 736 bp overlap
ChIP DE DE-FOXA2-2 556 bp overlap
ChIP HepG2 ENCFF894AYY 169 bp overlap
ChIP liver ENCFF877SFI 114 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 55 bp overlap
ChIP liver ENCSR310NYI.FOXA2.liver 85 bp overlap
FOXK2 1 dataset
ChIP Hep-G2 ENCSR171FUX.FOXK2.Hep-G2 155 bp overlap
FOXP1 1 dataset
ChIP LNCaP GSE62492.FOXP1.LNCaP 141 bp overlap
GABPB1 1 dataset
ChIP WTC11 ENCFF166QKI 147 bp overlap
GATA2 2 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 170 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 154 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE122847.GATA3.MCF-7 193 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 690 bp overlap
ChIP DE DE-GATA4-2 831 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 412 bp overlap
GATA6 5 datasets
ChIP AGS GSE51936.GATA6.AGS 123 bp overlap
ChIP DE DE-GATA6-1 701 bp overlap
ChIP DE DE-GATA6-2 728 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 415 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 364 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 217 bp overlap
GMEB1 1 dataset
ChIP Hep-G2 ENCSR780OXL.GMEB1.Hep-G2 110 bp overlap
HDAC2 1 dataset
ChIP HepG2 ENCFF990GUQ 197 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 190 bp overlap
HNF4A 5 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 117 bp overlap
ChIP HepG2 ENCFF146SSF 199 bp overlap
ChIP liver ENCFF354NRH 123 bp overlap
ChIP liver ENCFF449HPV 180 bp overlap
ChIP liver ERP002306.HNF4A.liver 180 bp overlap
HNF4G 2 datasets
ChIP liver ENCFF170YNZ 104 bp overlap
ChIP liver ENCSR297GII.HNF4G.liver 60 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 221 bp overlap
JUND 4 datasets
ChIP liver ENCFF007WWT 136 bp overlap
ChIP liver ENCFF557PGE 215 bp overlap
ChIP liver ENCSR196HGZ.JUND.liver 183 bp overlap
ChIP liver ENCSR837GTK.JUND.liver 116 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCFF159QSW 399 bp overlap
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 242 bp overlap
KLF16 1 dataset
ChIP HepG2 ENCFF969FFI 188 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 112 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 208 bp overlap
KMT2A 7 datasets
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 383 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 351 bp overlap
ChIP HEK293T_N-term_shCtrl GSE90762.KMT2A.HEK293T_N-term_shCtrl 395 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 497 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 271 bp overlap
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 75 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 181 bp overlap
LCOR 1 dataset
ChIP HepG2 ENCFF499KCU 179 bp overlap
MAX 3 datasets
ChIP liver ENCFF092GVW 193 bp overlap
ChIP liver ENCFF584QGB 124 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 189 bp overlap
MEN1 1 dataset
ChIP MCF-7 GSE85317.MEN1.MCF-7 318 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 73 bp overlap
MZF1 2 datasets
ChIP HEK293 ENCFF683ZWN 217 bp overlap
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 309 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 146 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 112 bp overlap
NR2F2 3 datasets
ChIP liver ENCFF565JGD 222 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 147 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 61 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 421 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 266 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 174 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 217 bp overlap
PATZ1 1 dataset
ChIP HepG2 ENCFF723PFC 137 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 132 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 680 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 249 bp overlap
PPARG 1 dataset
ChIP ASC GSE21366.PPARG.ASC 68 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 273 bp overlap
PRDM6 4 datasets
ChIP HEK293 ENCFF283AJL 482 bp overlap
ChIP HEK293 ENCFF283AJL 503 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 603 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 384 bp overlap
PROX1 1 dataset
ChIP HepG2 ENCFF016ZJS 168 bp overlap
PSIP1 2 datasets
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 263 bp overlap
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 145 bp overlap
RAD21 2 datasets
ChIP liver ENCFF485PAC 167 bp overlap
ChIP liver ENCFF522JHE 99 bp overlap
RARA 1 dataset
ChIP HepG2 ENCFF582XUA 160 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 51 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 196 bp overlap
REST 5 datasets
ChIP liver ENCFF240FWT 182 bp overlap
ChIP liver ENCFF577AZT 199 bp overlap
ChIP liver ENCFF577AZT 405 bp overlap
ChIP liver ENCSR893QWP.REST.liver 57 bp overlap
ChIP liver ENCSR867WPH.REST.liver 121 bp overlap
RREB1 1 dataset
ChIP HepG2 ENCFF986CSN 120 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 227 bp overlap
ChIP liver ENCFF807CIA 168 bp overlap
SALL1 1 dataset
ChIP HepG2 ENCFF426MCK 284 bp overlap
SAP130 1 dataset
ChIP HepG2 ENCFF892EHZ 283 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 271 bp overlap
SKI 2 datasets
ChIP Hep-G2 ENCSR754MUD.SKI.Hep-G2 57 bp overlap
ChIP HepG2 ENCFF631IPX 146 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 801 bp overlap
SMAD4 1 dataset
ChIP HepG2 ENCFF615GTE 158 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 350 bp overlap
SP1 3 datasets
ChIP liver ENCFF597LFJ 118 bp overlap
ChIP liver ENCFF597LFJ 370 bp overlap
ChIP liver ENCFF769YSM 145 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 158 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 361 bp overlap
SUPT16H 1 dataset
ChIP hiF-T GSE98758.SUPT16H.hiF-T 151 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 116 bp overlap
TAF1 2 datasets
ChIP liver ENCFF610UQP 197 bp overlap
ChIP liver ENCFF610UQP 396 bp overlap
TCF7L2 2 datasets
ChIP HEK293 ENCFF513JQN 471 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 238 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 285 bp overlap
THRB 1 dataset
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 54 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 167 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 326 bp overlap
YY1 3 datasets
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 289 bp overlap
ChIP liver ENCFF400MBC 257 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 55 bp overlap
ZBTB33 1 dataset
ChIP liver ENCFF592BJA 150 bp overlap
ZBTB34 1 dataset
ChIP HepG2 ENCFF161MIO 251 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 100 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 215 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 194 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 178 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 91 bp overlap
ZNF2 1 dataset
ChIP HEK293 ENCSR011CKE.ZNF2.HEK293 243 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 118 bp overlap
ZNF276 1 dataset
ChIP Hep-G2 ENCSR076KLJ.ZNF276.Hep-G2 110 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 303 bp overlap
ZNF341 1 dataset
ChIP HEK293 GSE76494.ZNF341.HEK293 164 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 228 bp overlap
ZNF407 1 dataset
ChIP Hep-G2 ENCSR005WGY.ZNF407.Hep-G2 179 bp overlap
ZNF598 1 dataset
ChIP Hep-G2 ENCSR173NAL.ZNF598.Hep-G2 241 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 296 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 253 bp overlap
ZNF883 1 dataset
ChIP Hep-G2 ENCSR882YYL.ZNF883.Hep-G2 142 bp overlap
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