chrX:102,651,041–102,651,962

chrX : 102,651,041 – 102,651,962

921 bp 96 TFs 8 linked genes

This 921 bp open chromatin element is linked to 8 target genes and is bound by 96 transcription factors.

Linked Genes

8 genes

Gene	Expression	Dist. to TSS	Distance	Link type
GPRASP1		at TSS	At TSS	Proximity
ENSG00000270050		7.9 kb	Proximal	Proximity
ENSG00000286327		8.0 kb	Proximal	Proximity
ARMCX5		51.9 kb	Distal	Multiome
ARMCX5-GPRASP2		61.1 kb	Distal	Multiome
LINC00630		117.7 kb	Distal	Multiome
TMSB15A		134.7 kb	Distal	Multiome
ENSG00000239407		233.0 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

96 transcription factors

ChIP HepG2 ENCFF252VFI 489 bp overlap

ChIP myofibroblast GSE90772.AR.myofibroblast 338 bp overlap

ARID2 1 dataset

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 225 bp overlap

ASH2L 3 datasets

ChIP H1 ENCFF399KAM 568 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 272 bp overlap

ChIP WA01 ENCSR850KIP.ASH2L.WA01 372 bp overlap

ASXL3 1 dataset

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 239 bp overlap

BCOR 3 datasets

ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 154 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 537 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 835 bp overlap

BRD4 21 datasets

ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 193 bp overlap

ChIP CLL_patient2 GSE109411.BRD4.CLL_patient2 429 bp overlap

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 208 bp overlap

ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 502 bp overlap

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 250 bp overlap

ChIP CLL_patient4_4h_CpG GSE109411.BRD4.CLL_patient4_4h_CpG 622 bp overlap

ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 56 bp overlap

ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 638 bp overlap

ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 95 bp overlap

ChIP KOPT-K1_E GSE54379.BRD4.KOPT-K1_E 78 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 250 bp overlap

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 263 bp overlap

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 258 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 261 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 598 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 314 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 917 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 820 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 654 bp overlap

ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 901 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 66 bp overlap

CBFB 2 datasets

ChIP ME-1 GSE46044.CBFB.ME-1 232 bp overlap

ChIP ME-1 GSE46044.CBFB.ME-1 89 bp overlap

CHD2 4 datasets

ChIP H1 ENCFF991MKH 331 bp overlap

ChIP SK-N-SH ENCFF669KMB 361 bp overlap

ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 180 bp overlap

ChIP WA01 ENCSR000EBT.CHD2.WA01 153 bp overlap

CTCF 6 datasets

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 154 bp overlap

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 252 bp overlap

ChIP keratinocyte GSE154221.CTCF.keratinocyte 205 bp overlap

ChIP nerve_tibial ENCSR822PJT.CTCF.nerve_tibial 62 bp overlap

ChIP ovary ENCFF845YUT 381 bp overlap

ChIP uterus ENCFF466ZUR 325 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 289 bp overlap

ChIP WTC11 ENCFF449LLF 491 bp overlap

Motif ES_0h ES_0h-E2F6_MA0471.3 8 bp overlap

EP300 1 dataset

ChIP tibial nerve ENCFF346AYA 297 bp overlap

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 346 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 198 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 125 bp overlap

ESR1 2 datasets

ChIP Ishikawa GSE99905.ESR1.Ishikawa 271 bp overlap

ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 397 bp overlap

ETS1 2 datasets

ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 319 bp overlap

ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 267 bp overlap

ChIP WA01 ENCSR000ASY.EZH2.WA01 269 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 84 bp overlap

JARID2 2 datasets

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 270 bp overlap

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 244 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 316 bp overlap

KDM4A 7 datasets

ChIP H1 ENCFF078LED 176 bp overlap

ChIP WA01 ENCSR000AVC.KDM4A.WA01 825 bp overlap

ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 166 bp overlap

ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 172 bp overlap

ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 329 bp overlap

ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 104 bp overlap

ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 179 bp overlap

KLF1 2 datasets

Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap

ChIP HEK293 ENCFF159QSW 437 bp overlap

KLF10 1 dataset

Motif DE_72h DE_72h-KLF10_MA1511.2 9 bp overlap

KLF11 1 dataset

Motif DE_72h DE_72h-KLF11_MA1512.2 10 bp overlap

KLF12 1 dataset

Motif DE_72h DE_72h-KLF12_MA0742.2 9 bp overlap

KLF13 1 dataset

Motif DE_72h DE_72h-KLF13_MA0657.2 17 bp overlap

KLF14 1 dataset

Motif DE_72h DE_72h-KLF14_MA0740.2 9 bp overlap

KLF15 1 dataset

Motif DE_72h DE_72h-KLF15_MA1513.2 8 bp overlap

KLF16 1 dataset

Motif DE_72h DE_72h-KLF16_MA0741.1 11 bp overlap

Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap

Motif DE_72h DE_72h-KLF3_MA1516.2 10 bp overlap

Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap

Motif DE_72h DE_72h-KLF5_MA0599.1 10 bp overlap

Motif DE_72h DE_72h-KLF6_MA1517.2 9 bp overlap

Motif DE_72h DE_72h-KLF7_MA1959.2 8 bp overlap

KLF9 3 datasets

Motif DE_72h DE_72h-KLF9_MA1107.3 11 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 103 bp overlap

ChIP HEK293 ENCFF588INF 451 bp overlap

KMT2A 1 dataset

ChIP MOLM-13 GSE114981.KMT2A.MOLM-13 238 bp overlap

ChIP H1 ENCFF914VQY 357 bp overlap

ChIP SK-N-SH ENCFF285LXR 411 bp overlap

ChIP SK-N-SH ENCFF285LXR 411 bp overlap

ChIP WTC11 ENCFF223QFY 585 bp overlap

ChIP HEK293 ENCFF994GSG 426 bp overlap

ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 105 bp overlap

ChIP SK-N-SH ENCFF746HVJ 491 bp overlap

Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap

ChIP MOLT-3 GSE59657.MYB.MOLT-3 181 bp overlap

ChIP MOLT-3 GSE59657.MYB.MOLT-3 207 bp overlap

ChIP BE2C_SHCTR GSE70098.MYC.BE2C_SHCTR 67 bp overlap

ChIP BE2C_SHWDR5 GSE70098.MYC.BE2C_SHWDR5 182 bp overlap

ChIP NB69 GSE138295.MYC.NB69 293 bp overlap

ChIP NB69 GSE138295.MYC.NB69 371 bp overlap

MYCN 4 datasets

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 353 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 335 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 491 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 251 bp overlap

NCAPH2 2 datasets

ChIP HEK293 GSE97540.NCAPH2.HEK293 410 bp overlap

ChIP HEK293 GSE97540.NCAPH2.HEK293 313 bp overlap

ChIP ProEs GSE59087.NFE2.ProEs 99 bp overlap

ChIP SK-N-SH ENCFF820YTU 257 bp overlap

OGG1 4 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 795 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 480 bp overlap

ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 116 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 463 bp overlap

PATZ1 2 datasets

Motif DE_72h DE_72h-PATZ1_MA1961.2 11 bp overlap

ChIP SK-N-SH ENCFF650NCN 365 bp overlap

ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 839 bp overlap

POLR2A 44 datasets

ChIP adrenal gland ENCFF892SFM 341 bp overlap

ChIP body of pancreas ENCFF675RCN 625 bp overlap

ChIP breast epithelium ENCFF045XXN 179 bp overlap

ChIP breast epithelium ENCFF065JSZ 405 bp overlap

ChIP breast epithelium ENCFF110TAD 345 bp overlap

ChIP breast epithelium ENCFF955FMX 457 bp overlap

ChIP esophagus muscularis mucosa ENCFF432ZCY 235 bp overlap

ChIP esophagus muscularis mucosa ENCFF759BBR 187 bp overlap

ChIP esophagus muscularis mucosa ENCFF791ZXN 419 bp overlap

ChIP esophagus squamous epithelium ENCFF297FPP 391 bp overlap

ChIP esophagus squamous epithelium ENCFF708IOX 461 bp overlap

ChIP gastroesophageal sphincter ENCFF043KAM 391 bp overlap

ChIP gastroesophageal sphincter ENCFF070PCA 214 bp overlap

ChIP gastroesophageal sphincter ENCFF238INU 511 bp overlap

ChIP gastroesophageal sphincter ENCFF826EZZ 417 bp overlap

ChIP ovary ENCFF425PQK 377 bp overlap

ChIP prostate gland ENCFF832RQK 357 bp overlap

ChIP prostate gland ENCFF881OMH 417 bp overlap

ChIP sigmoid colon ENCFF101ILL 183 bp overlap

ChIP sigmoid colon ENCFF653CQA 425 bp overlap

ChIP sigmoid colon ENCFF661AMI 357 bp overlap

ChIP sigmoid colon ENCFF725QFT 349 bp overlap

ChIP sigmoid colon ENCFF748YVT 383 bp overlap

ChIP sigmoid colon ENCFF754JQR 247 bp overlap

ChIP spleen ENCFF044PYR 311 bp overlap

ChIP spleen ENCFF446ZGT 560 bp overlap

ChIP spleen ENCFF706IUS 568 bp overlap

ChIP stomach ENCFF278MYS 241 bp overlap

ChIP stomach ENCFF607ZPU 325 bp overlap

ChIP stomach ENCFF820WZN 104 bp overlap

ChIP suprapubic skin ENCFF832BBO 365 bp overlap

ChIP thyroid gland ENCFF979LRR 411 bp overlap

ChIP tibial nerve ENCFF983HAU 471 bp overlap

ChIP transverse colon ENCFF193UMS 571 bp overlap

ChIP transverse colon ENCFF607LKE 223 bp overlap

ChIP transverse colon ENCFF610RWV 425 bp overlap

ChIP transverse colon ENCFF840PXT 321 bp overlap

ChIP upper lobe of left lung ENCFF199JUI 405 bp overlap

ChIP upper lobe of left lung ENCFF640VPA 551 bp overlap

ChIP uterus ENCFF208ADI 230 bp overlap

ChIP uterus ENCFF566ZPY 325 bp overlap

ChIP vagina ENCFF216BYP 285 bp overlap

ChIP vagina ENCFF384GAB 632 bp overlap

ChIP vagina ENCFF384GAB 653 bp overlap

POLR2G 1 dataset

ChIP K562 ENCFF648YPL 645 bp overlap

POU5F1 2 datasets

ChIP BG03 GSE21614.POU5F1.BG03 478 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 507 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 720 bp overlap

PRDM10 1 dataset

ChIP HEK293 ENCFF145WQQ 445 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap

Plagl1 1 dataset

Motif DE_72h DE_72h-Plagl1_MA1615.2 8 bp overlap

RBPJ 2 datasets

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 482 bp overlap

ChIP PANC-1 ENCSR000BJO.REST.PANC-1 167 bp overlap

RORC 4 datasets

ChIP HCC70 GSE126380.RORC.HCC70 200 bp overlap

ChIP HCC70 GSE126380.RORC.HCC70 377 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 344 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 427 bp overlap

RUNX1 5 datasets

ChIP AML_Blast GSE60130.RUNX1.AML_Blast 367 bp overlap

ChIP AML_Blast GSE60130.RUNX1.AML_Blast 140 bp overlap

ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 503 bp overlap

ChIP CD34 GSE64862.RUNX1.CD34 367 bp overlap

ChIP CD34 GSE64862.RUNX1.CD34 140 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 311 bp overlap

ChIP WA01 GSE104690.RYBP.WA01 451 bp overlap

SIN3A 2 datasets

ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 167 bp overlap

ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 209 bp overlap

SMAD2-3 2 datasets

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 230 bp overlap

ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 420 bp overlap

SMAD2_3 1 dataset

ChIP ESC S23-ESC-d0-SMAD2_3-exp1 331 bp overlap

SMARCA4 1 dataset

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 298 bp overlap

SMARCC1 1 dataset

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 283 bp overlap

SOX17_M 2 datasets

ChIP DE_D2 DED2-SOX17-M_Batch_II 290 bp overlap

ChIP DE_D2 DED2-SOX17-M_Batch_II 143 bp overlap

Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap

Motif ES_0h ES_0h-SP1_MA0079.5 9 bp overlap

Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap

Motif DE_72h DE_72h-SP3_MA0746.3 11 bp overlap

ChIP HEK293 ENCFF087XLA 140 bp overlap

Motif DE_72h DE_72h-SP4_MA0685.2 9 bp overlap

Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap

Motif DE_72h DE_72h-SP8_MA0747.2 11 bp overlap

Motif DE_72h DE_72h-SP9_MA1564.2 10 bp overlap

SREBP2 4 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 340 bp overlap

ChIP HCC70 GSE126380.SREBP2.HCC70 442 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 316 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 398 bp overlap

STAT3 2 datasets

ChIP WA01 ERP004237.STAT3.WA01 209 bp overlap

ChIP WA01 ERP004237.STAT3.WA01 190 bp overlap

SUPT5H 1 dataset

ChIP MOLT-4_NVP2 GSE89384.SUPT5H.MOLT-4_NVP2 243 bp overlap

ChIP WA01 ENCSR000BHO.TAF1.WA01 494 bp overlap

TARDBP 2 datasets

ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 173 bp overlap

ChIP Hep-G2 GSE120104.TARDBP.Hep-G2 173 bp overlap

ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 229 bp overlap

TFIIIC 2 datasets

ChIP HEK293 GSE119418.TFIIIC.HEK293 291 bp overlap

ChIP HEK293 GSE119418.TFIIIC.HEK293 285 bp overlap

ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 64 bp overlap

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 220 bp overlap

ZBED4 1 dataset

Motif DE_72h DE_72h-ZBED4_MA2328.1 10 bp overlap

ZFP57 1 dataset

Motif DE_48h DE_48h-ZFP57_MA1583.2 7 bp overlap

ZNF143 1 dataset

ChIP CUTLL1 GSE29600.ZNF143.CUTLL1 247 bp overlap

ZNF148 1 dataset

Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap

ZNF335 2 datasets

ChIP HEK293 ENCFF784SLD 485 bp overlap

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 405 bp overlap

ZNF460 1 dataset

Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap

ZNF682 1 dataset

Motif DE_72h DE_72h-ZNF682_MA1599.2 11 bp overlap

ChIP HEK293 ENCFF835SGA 525 bp overlap

Zfp809 1 dataset

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap