chr20 : 11,718,641 11,719,448
807 bp 141 TFs 0 linked genes
This 807 bp open chromatin element has no linked target genes and is bound by 141 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:11,713,641 – 11,724,448
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
141 transcription factors
Source
Cell type
ASCL1 2 datasets
Motif DE_12h DE_12h-ASCL1_MA1100.3 8 bp overlap
Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 359 bp overlap
Ar 1 dataset
Motif DE_12h DE_12h-Ar_MA0007.4 16 bp overlap
Arid3a 1 dataset
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Atoh1 2 datasets
Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap
Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 214 bp overlap
BHLHA15 1 dataset
Motif DE_12h DE_12h-BHLHA15_MA0607.2 10 bp overlap
BHLHE22 1 dataset
Motif DE_12h DE_12h-BHLHE22_MA0818.2 10 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 248 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 135 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 248 bp overlap
CTCF 2 datasets
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
DMRTA1 1 dataset
Motif DE_12h DE_12h-DMRTA1_MA1707.2 10 bp overlap
EBF1 1 dataset
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
ETV2::FIGLA 3 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 3 datasets
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif ES_0h ES_0h-ETV5FIGLA_MA1945.2 14 bp overlap
Ebf4 1 dataset
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
FIGLA 1 dataset
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
FOSL2 1 dataset
Motif DE_12h DE_12h-FOSL2_MA0478.2 10 bp overlap
GATA2 1 dataset
Motif DE_12h DE_12h-GATA2_MA0036.4 7 bp overlap
GATA4 2 datasets
Motif DE_12h DE_12h-GATA4_MA0482.3 8 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 250 bp overlap
GATA5 1 dataset
Motif DE_12h DE_12h-GATA5_MA0766.3 8 bp overlap
GATA6 6 datasets
Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 278 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 325 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 418 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 391 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 351 bp overlap
Gata3 1 dataset
Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap
HES7 1 dataset
Motif DE_12h DE_12h-HES7_MA0822.1 12 bp overlap
HSF1 1 dataset
Motif DE_12h DE_12h-HSF1_MA0486.2 13 bp overlap
HSF2 1 dataset
Motif DE_12h DE_12h-HSF2_MA0770.1 13 bp overlap
HSF4 1 dataset
Motif DE_12h DE_12h-HSF4_MA0771.1 13 bp overlap
Hic1 1 dataset
Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap
Hmga1 1 dataset
Motif DE_12h DE_12h-Hmga1_MA2124.1 8 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
IRF2 1 dataset
Motif DE_12h DE_12h-IRF2_MA0051.2 16 bp overlap
IRF4 1 dataset
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
IRF5 1 dataset
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
IRF9 1 dataset
Motif DE_12h DE_12h-IRF9_MA0653.1 15 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 689 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 361 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 194 bp overlap
LHX6 1 dataset
Motif DE_12h DE_12h-LHX6_MA0658.2 8 bp overlap
LIN54 1 dataset
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 163 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MEF2C 1 dataset
Motif DE_12h DE_12h-MEF2C_MA0497.2 11 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_12h DE_12h-MEIS2_MA0774.1 8 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 224 bp overlap
MYOD1 1 dataset
Motif DE_12h DE_12h-MYOD1_MA0499.3 9 bp overlap
Mecom 1 dataset
Motif DE_12h DE_12h-Mecom_MA0029.2 11 bp overlap
NANOG 15 datasets
ChIP GM23338 ENCFF065NZG 311 bp overlap
ChIP GM23338 ENCFF065NZG 200 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 200 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 102 bp overlap
ChIP H1 ENCFF747ZPQ 156 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 807 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 395 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 229 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 159 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 807 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 344 bp overlap
ChIP hESC GSE18292.NANOG.hESC 263 bp overlap
ChIP hESC GSE20650.NANOG.hESC 320 bp overlap
ChIP hESC GSE20650.NANOG.hESC 147 bp overlap
ChIP hESC GSE18292.NANOG.hESC 104 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 140 bp overlap
NFATC3 2 datasets
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 123 bp overlap
NR3C1 2 datasets
Motif DE_12h DE_12h-NR3C1_MA0113.4 15 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 470 bp overlap
NR3C2 1 dataset
Motif DE_12h DE_12h-NR3C2_MA0727.2 15 bp overlap
Nanog 1 dataset
Motif DE_12h DE_12h-Nanog_MA2339.1 7 bp overlap
Nfat5 2 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 2 datasets
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 2 datasets
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Motif ES_0h ES_0h-Nfatc2_MA0152.3 8 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F1::SOX2 3 datasets
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 256 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 807 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 215 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 156 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
SCRT1 1 dataset
Motif DE_12h DE_12h-SCRT1_MA0743.3 10 bp overlap
SCRT2 1 dataset
Motif DE_12h DE_12h-SCRT2_MA0744.3 10 bp overlap
SMAD2 2 datasets
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 372 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 244 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 285 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 311 bp overlap
SMAD3 3 datasets
ChIP BG03 GSE21614.SMAD3.BG03 162 bp overlap
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 238 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 136 bp overlap
SMARCA4 4 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 340 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 201 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 382 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 296 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 191 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 281 bp overlap
SMARCC1 4 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 257 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 180 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 168 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 381 bp overlap
SNAI1 1 dataset
Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap
SNAI2 2 datasets
Motif DE_12h DE_12h-SNAI2_MA0745.3 8 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SNAI3 1 dataset
Motif DE_12h DE_12h-SNAI3_MA1559.2 9 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 233 bp overlap
SOX2 2 datasets
ChIP hiPSC GSE56567.SOX2.hiPSC 298 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 185 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 260 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 146 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 299 bp overlap
SP5 2 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SPI1 3 datasets
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 162 bp overlap
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 187 bp overlap
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 171 bp overlap
SPIB 1 dataset
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TBP 2 datasets
ChIP H1 ENCFF859IIO 307 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 153 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX4 1 dataset
Motif DE_12h DE_12h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TCF12 4 datasets
Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap
ChIP H1 ENCFF203EBH 249 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 120 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 260 bp overlap
TCF21 1 dataset
Motif DE_12h DE_12h-TCF21_MA1568.2 10 bp overlap
TCF3 2 datasets
Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap
ChIP NPC GSE154479.TCF3.NPC 224 bp overlap
TCF4 1 dataset
Motif DE_12h DE_12h-TCF4_MA0830.3 8 bp overlap
TRPS1 1 dataset
Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap
Thap11 2 datasets
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap
VENTX 1 dataset
Motif DE_12h DE_12h-VENTX_MA0724.1 9 bp overlap
YY1 5 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP H1 ENCFF524BTL 247 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 344 bp overlap
ChIP WA01 GSE39096.YY1.WA01 185 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 198 bp overlap
Yy1 1 dataset
Motif DE_12h DE_12h-Yy1_MA0095.4 8 bp overlap
ZEB1 1 dataset
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
ZFP42 1 dataset
Motif DE_12h DE_12h-ZFP42_MA1651.2 13 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 242 bp overlap
ZNF136 2 datasets
Motif DE_12h DE_12h-ZNF136_MA1588.1 15 bp overlap
Motif ES_0h ES_0h-ZNF136_MA1588.1 15 bp overlap
ZNF175 1 dataset
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 388 bp overlap
ZNF257 2 datasets
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF320 2 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif ES_0h ES_0h-ZNF320_MA1976.2 20 bp overlap
ZNF35 2 datasets
Motif DE_12h DE_12h-ZNF35_MA2333.1 7 bp overlap
Motif ES_0h ES_0h-ZNF35_MA2333.1 7 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 197 bp overlap
ZNF462 3 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCFF896CCA 237 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 791 bp overlap
ZNF528 1 dataset
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
ZNF549 1 dataset
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap
ZNF582 1 dataset
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
ZNF692 1 dataset
Motif DE_12h DE_12h-ZNF692_MA1986.2 8 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
Zfp335 1 dataset
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap