chr19:56,346,962–56,347,557

chr19 : 56,346,962 – 56,347,557

595 bp 97 TFs 10 linked genes

This 595 bp open chromatin element is linked to 10 target genes and is bound by 97 transcription factors.

Linked Genes

10 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000267429		625 bp	At TSS	Proximity
ZNF542P		20.9 kb	Distal	Multiome
ZSCAN5A		32.8 kb	Distal	Multiome
ZNF582		46.2 kb	Distal	Multiome
ZNF583		57.0 kb	Distal	Multiome
ZNF444		206.0 kb	Distal	Multiome
ZNF470-DT		220.1 kb	Distal	Multiome
ZNF470		220.2 kb	Distal	Multiome
ZNF787		226.0 kb	Distal	Multiome
ZNF71		248.0 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

97 transcription factors

ARID1B 2 datasets

ChIP K-562 ENCSR822CCM.ARID1B.K-562 122 bp overlap

ChIP K562 ENCFF938UXQ 436 bp overlap

ChIP K562 ENCFF030XBX 97 bp overlap

CAVIN1 1 dataset

ChIP K562 ENCFF731YBD 154 bp overlap

CBFA2T2 1 dataset

ChIP K562 ENCFF963TXY 275 bp overlap

CBFA2T3 3 datasets

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 137 bp overlap

ChIP K-562 GSE142227.CBFA2T3.K-562 63 bp overlap

ChIP K562 ENCFF673OEZ 339 bp overlap

CEBPB 1 dataset

ChIP K562 ENCFF194QGF 284 bp overlap

CEBPD 1 dataset

ChIP K-562 ENCSR000BVY.CEBPD.K-562 141 bp overlap

CREB3 1 dataset

ChIP K562 ENCFF985QJI 182 bp overlap

CREB5 1 dataset

ChIP K562 ENCFF724YOH 165 bp overlap

CXXC5 1 dataset

ChIP K562 ENCFF497CZN 51 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF093OYK 203 bp overlap

ChIP K562 ENCFF775HUO 157 bp overlap

ChIP K562 ENCFF688PUB 371 bp overlap

ChIP K562 ENCFF582AFY 182 bp overlap

EP300 2 datasets

ChIP K-562 ENCSR000EGE.EP300.K-562 200 bp overlap

ChIP K562 ENCFF226VMS 96 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-2 470 bp overlap

GATA1 3 datasets

ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 137 bp overlap

ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 110 bp overlap

ChIP K562 ENCFF094CMK 251 bp overlap

GATA2 4 datasets

ChIP K-562 ENCSR000DKA.GATA2.K-562 111 bp overlap

ChIP K562 ENCFF513FTZ 301 bp overlap

ChIP K562 ENCFF544PCK 251 bp overlap

ChIP K562 ENCFF830LLA 436 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 404 bp overlap

ChIP DE DE-GATA4-2 595 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 348 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 491 bp overlap

ChIP DE DE-GATA6-2 595 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 336 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap

GTF2A2 1 dataset

ChIP K562 ENCFF041WRN 287 bp overlap

HDAC2 1 dataset

ChIP K-562 ENCSR893WSB.HDAC2.K-562 72 bp overlap

HDAC8 1 dataset

ChIP K562 ENCFF784HCJ 186 bp overlap

HIVEP1 1 dataset

ChIP K562 ENCFF983WKN 108 bp overlap

HMBOX1 2 datasets

ChIP K562 ENCFF055GAZ 328 bp overlap

ChIP K562 ENCFF317JJX 370 bp overlap

ChIP K562 ENCFF158CQE 58 bp overlap

ChIP K562 ENCFF170RNI 58 bp overlap

IFI16 1 dataset

ChIP K562 ENCFF291QSI 104 bp overlap

IKZF1 1 dataset

ChIP K562 ENCFF771OHZ 133 bp overlap

IRF1 2 datasets

ChIP K562 ENCFF277KTJ 264 bp overlap

ChIP K562 ENCFF277KTJ 64 bp overlap

ChIP K562 ENCFF336RCR 246 bp overlap

KDM1A 1 dataset

ChIP K562 ENCFF128TYE 461 bp overlap

KLF16 1 dataset

ChIP K562 ENCFF464PIV 146 bp overlap

KLF6 2 datasets

ChIP K-562 ENCSR297CGF.KLF6.K-562 82 bp overlap

ChIP K562 ENCFF948QSP 124 bp overlap

ChIP K-562 GSE142227.LDB1.K-562 396 bp overlap

ChIP K562 ENCFF333ZIV 362 bp overlap

ChIP K562 ENCFF982GSZ 230 bp overlap

ChIP K562 ENCFF217VLV 381 bp overlap

MECOM 1 dataset

ChIP K562 ENCFF773RGL 93 bp overlap

MEIS2 1 dataset

ChIP K562 ENCFF320GSD 381 bp overlap

ChIP K562 ENCFF811XMB 131 bp overlap

ChIP K562 ENCFF295NDX 130 bp overlap

NCOR1 2 datasets

ChIP K562 ENCFF788MPU 165 bp overlap

ChIP K562 ENCFF866HRM 284 bp overlap

ChIP K562 ENCFF167YID 177 bp overlap

NR2C1 2 datasets

ChIP K-562 ENCSR178DEG.NR2C1.K-562 58 bp overlap

ChIP K562 ENCFF568JLK 185 bp overlap

NR3C1 1 dataset

ChIP K-562_GLUCC ERP007081.NR3C1.K-562_GLUCC 79 bp overlap

NR4A1 2 datasets

ChIP K-562 ENCSR130PDE.NR4A1.K-562 154 bp overlap

ChIP K562 ENCFF998LHF 123 bp overlap

PHTF2 1 dataset

ChIP K562 ENCFF723SOM 121 bp overlap

ChIP K562 ENCFF801LKH 429 bp overlap

PTTG1 1 dataset

ChIP K562 ENCFF017KRM 187 bp overlap

ChIP K562 ENCFF607OWI 135 bp overlap

RCOR1 1 dataset

ChIP K562 ENCFF216EEJ 297 bp overlap

ChIP K562 ENCFF892SPR 183 bp overlap

ChIP K562 ENCFF685YZN 204 bp overlap

RHOXF2B 1 dataset

ChIP K562 ENCFF249USN 119 bp overlap

RREB1 1 dataset

ChIP K562 ENCFF796IEO 153 bp overlap

SHOX2 1 dataset

ChIP K-562 ENCSR184IQF.SHOX2.K-562 73 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 375 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 411 bp overlap

SMAD3 1 dataset

ChIP K562 ENCFF885DQE 94 bp overlap

SMAD4 1 dataset

ChIP K562 ENCFF628RBP 239 bp overlap

SMARCA4 1 dataset

ChIP K562 ENCFF506JCB 195 bp overlap

STAT5A 2 datasets

ChIP K-562 ENCSR000BRR.STAT5A.K-562 135 bp overlap

ChIP K562 ENCFF226BTJ 341 bp overlap

ChIP K562 ENCFF314WLE 119 bp overlap

TAL1 4 datasets

ChIP K-562 ENCSR000EHB.TAL1.K-562 195 bp overlap

ChIP K562 ENCFF620GMX 295 bp overlap

ChIP K562 ENCFF661CCK 277 bp overlap

ChIP ProEs GSE59087.TAL1.ProEs 133 bp overlap

TBL1XR1 1 dataset

ChIP K562 ENCFF899VEC 330 bp overlap

TCF12 2 datasets

ChIP K562 ENCFF909RDY 383 bp overlap

ChIP K562 ENCFF931DJY 283 bp overlap

ChIP K562 ENCFF319QZT 217 bp overlap

TEAD1 1 dataset

ChIP K562 ENCFF465AQA 123 bp overlap

TEAD4 1 dataset

ChIP K562 ENCFF673NIK 276 bp overlap

TFDP1 1 dataset

ChIP K562 ENCFF794ZXJ 595 bp overlap

TRIM24 1 dataset

ChIP K562 ENCFF616RIL 451 bp overlap

TSHZ1 1 dataset

ChIP K562 ENCFF289XHG 117 bp overlap

VEZF1 1 dataset

ChIP K562 ENCFF053XDV 537 bp overlap

ZBTB17 1 dataset

ChIP K562 ENCFF731UTU 189 bp overlap

ZBTB33 1 dataset

ChIP K562 ENCFF875HLX 249 bp overlap

ZBTB40 1 dataset

ChIP K562 ENCFF337GJB 388 bp overlap

ZBTB7A 1 dataset

ChIP K562 ENCFF579ZGM 401 bp overlap

ZBTB9 1 dataset

ChIP K562 ENCFF233EFX 123 bp overlap

ZMIZ1 1 dataset

ChIP K562 ENCFF647WJV 337 bp overlap

ZNF148 1 dataset

ChIP K562 ENCFF352SDL 344 bp overlap

ZNF175 1 dataset

ChIP K562 ENCFF497AEJ 326 bp overlap

ZNF197 1 dataset

ChIP K562 ENCFF872BAU 336 bp overlap

ZNF215 2 datasets

ChIP K-562 ENCSR699RWG.ZNF215.K-562 88 bp overlap

ChIP K562 ENCFF317MOH 154 bp overlap

ZNF239 2 datasets

ChIP K-562 ENCSR606KTL.ZNF239.K-562 61 bp overlap

ChIP K562 ENCFF703IKI 135 bp overlap

ZNF281 1 dataset

ChIP K562 ENCFF594VNM 84 bp overlap

ZNF311 2 datasets

ChIP K-562 ENCSR388ZRV.ZNF311.K-562 79 bp overlap

ChIP K562 ENCFF986QSP 129 bp overlap

ZNF395 1 dataset

ChIP K562 ENCFF464EIT 389 bp overlap

ZNF397 1 dataset

ChIP K562 ENCFF203WSD 56 bp overlap

ZNF398 1 dataset

ChIP K562 ENCFF664RQO 89 bp overlap

ZNF583 2 datasets

ChIP K-562 ENCSR775EQV.ZNF583.K-562 82 bp overlap

ChIP K562 ENCFF879KXH 158 bp overlap

ZNF584 2 datasets

ChIP K562 ENCFF771INO 425 bp overlap

ChIP K562 ENCFF771INO 110 bp overlap

ZNF592 2 datasets

ChIP K-562 ENCSR249BHQ.ZNF592.K-562 128 bp overlap

ChIP K562 ENCFF547OSS 224 bp overlap

ZNF639 1 dataset

ChIP K562 ENCFF271FQR 406 bp overlap

ZNF644 1 dataset

ChIP K562 ENCFF290PDB 362 bp overlap

ZNF668 1 dataset

ChIP K562 ENCFF112IUE 83 bp overlap

ZNF740 1 dataset

ChIP K562 ENCFF447IXE 303 bp overlap

ZNF76 2 datasets

ChIP K-562 ENCSR257AFV.ZNF76.K-562 71 bp overlap

ChIP K562 ENCFF267KQX 160 bp overlap

ZNF766 1 dataset

ChIP K562 ENCFF348LDO 314 bp overlap