chr19 : 38,723,128 38,723,747
619 bp 112 TFs 0 linked genes
This 619 bp open chromatin element has no linked target genes and is bound by 112 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr19:38,718,128 – 38,728,747
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
112 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K-562 ENCSR440VKE.ADNP.K-562 127 bp overlap
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 143 bp overlap
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 177 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 114 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 287 bp overlap
ATF2 1 dataset
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 159 bp overlap
BCL11A 2 datasets
ChIP HEK293 ENCFF294OHB 154 bp overlap
ChIP HEK293 ENCSR021DJC.BCL11A.HEK293 145 bp overlap
BCL3 2 datasets
ChIP A-549 ENCSR000BQH.BCL3.A-549 165 bp overlap
ChIP A-549 ENCSR000BQH.BCL3.A-549 247 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 181 bp overlap
ChIP K562 ENCFF343XWA 67 bp overlap
BRD4 2 datasets
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 136 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 247 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 140 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 150 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 228 bp overlap
DDX5 1 dataset
ChIP BT-549 GSE112961.DDX5.BT-549 274 bp overlap
EGR1 1 dataset
ChIP A-375 GSE116190.EGR1.A-375 184 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 180 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 327 bp overlap
ChIP hESC GSE26097.EOMES.hESC 110 bp overlap
ESR1 20 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 316 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 320 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 158 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 158 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 251 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 214 bp overlap
ChIP MCF-7_E2-20min-ERalpha GSE94023.ESR1.MCF-7_E2-20min-ERalpha 171 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 248 bp overlap
ChIP MCF-7_E2-5min-ERalpha GSE94023.ESR1.MCF-7_E2-5min-ERalpha 193 bp overlap
ChIP MCF-7_E2-80min-ERalpha GSE94023.ESR1.MCF-7_E2-80min-ERalpha 178 bp overlap
ChIP MCF-7_LTED_E2 GSE86538.ESR1.MCF-7_LTED_E2 204 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 352 bp overlap
ChIP MCF-7_estradiol-Dex_4h GSE99626.ESR1.MCF-7_estradiol-Dex_4h 127 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 214 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 192 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 232 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 255 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 220 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 245 bp overlap
ChIP VCaP_E2_ERA GSE43985.ESR1.VCaP_E2_ERA 218 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 218 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 174 bp overlap
ESR1_pS118 2 datasets
ChIP MCF-7_E2_sc GSE117569.ESR1_pS118.MCF-7_E2_sc 619 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1_pS118.MCF-7_Veh_sc 307 bp overlap
ETS1 1 dataset
ChIP A-549 ENCSR000BPU.ETS1.A-549 99 bp overlap
FOXA1 2 datasets
ChIP A-549 ENCSR000BPX.FOXA1.A-549 179 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 125 bp overlap
FOXA2 7 datasets
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 207 bp overlap
ChIP DE DE-FOXA2-1 472 bp overlap
ChIP DE DE-FOXA2-2 415 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 432 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 337 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 408 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 257 bp overlap
FOXO4 1 dataset
ChIP HepG2 ENCFF909ISL 107 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 539 bp overlap
ChIP DE DE-GATA4-2 544 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 550 bp overlap
ChIP DE DE-GATA6-2 519 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 572 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 619 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 619 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 619 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 619 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 619 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 499 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 111 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 361 bp overlap
GLIS2 3 datasets
ChIP HEK293 ENCFF446EIF 92 bp overlap
ChIP HEK293 ENCFF446EIF 54 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 619 bp overlap
GTF2I 1 dataset
ChIP K562 ENCFF539BYI 213 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 160 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 167 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 117 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 135 bp overlap
HNRNPK 1 dataset
ChIP primary-keratinocyte GSE122327.HNRNPK.primary-keratinocyte 602 bp overlap
IFNA1 4 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 189 bp overlap
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 207 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 265 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 215 bp overlap
JUN 6 datasets
ChIP A549 ENCFF846DUV 244 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 469 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 619 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 299 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 454 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 209 bp overlap
JUND 2 datasets
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 152 bp overlap
ChIP HT29_DSMO GSE77039.JUND.HT29_DSMO 329 bp overlap
KDM1A 12 datasets
ChIP A-549 ENCSR639GWS.KDM1A.A-549 151 bp overlap
ChIP A549 ENCFF633QSB 194 bp overlap
ChIP A549 ENCFF633QSB 393 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 406 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 245 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 222 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 338 bp overlap
ChIP K562 ENCFF128TYE 313 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 132 bp overlap
ChIP Kasumi-1_RN1 GSE71739.KDM1A.Kasumi-1_RN1 112 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 197 bp overlap
ChIP SKNO-1_GSK690 GSE71739.KDM1A.SKNO-1_GSK690 79 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 221 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 430 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 120 bp overlap
KLF8 2 datasets
ChIP HEK293 ENCFF929IAJ 217 bp overlap
ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 107 bp overlap
MAX 2 datasets
ChIP A549 ENCFF310XGQ 286 bp overlap
ChIP melanocyte GSE115845.MAX.melanocyte 182 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 176 bp overlap
MED1 3 datasets
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 348 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 253 bp overlap
ChIP HUVEC-C_siERG GSE124892.MED1.HUVEC-C_siERG 154 bp overlap
MEN1 1 dataset
ChIP HCT-116_B1 GSE152144.MEN1.HCT-116_B1 155 bp overlap
MSX2 1 dataset
ChIP MCF-7 ENCSR604WXQ.MSX2.MCF-7 136 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 72 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 76 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 619 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 161 bp overlap
NFXL1 2 datasets
ChIP K-562 ENCSR085DDI.NFXL1.K-562 144 bp overlap
ChIP K562 ENCFF619QDE 168 bp overlap
NONO 1 dataset
ChIP HepG2 ENCFF361UQH 580 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 127 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 223 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 199 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 116 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 327 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 447 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 128 bp overlap
PCBP1 1 dataset
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 148 bp overlap
POLR2A 5 datasets
ChIP HCT116 ENCFF508RDJ 321 bp overlap
ChIP HepG2 ENCFF252NAR 364 bp overlap
ChIP HepG2 ENCFF718XAJ 257 bp overlap
ChIP K562 ENCFF262YXJ 82 bp overlap
ChIP spleen ENCFF446ZGT 256 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF508UTS 301 bp overlap
ChIP K562 ENCFF648YPL 228 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 230 bp overlap
PTBP1 6 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 170 bp overlap
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 122 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 155 bp overlap
ChIP K-562 ENCSR948KMB.PTBP1.K-562 155 bp overlap
ChIP K562 ENCFF238NLS 184 bp overlap
ChIP K562 ENCFF773HPT 187 bp overlap
RBM22 6 datasets
ChIP HepG2 ENCFF292RVQ 619 bp overlap
ChIP HepG2 ENCFF561IAJ 619 bp overlap
ChIP HepG2 ENCFF561IAJ 377 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 224 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 262 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 222 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 180 bp overlap
ChIP K562 ENCFF248CGR 82 bp overlap
ChIP K562 ENCFF957ORK 82 bp overlap
REST 2 datasets
ChIP A-549 ENCSR000BQP.REST.A-549 175 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 286 bp overlap
RPA2_phospho 2 datasets
ChIP HeLa_shASF GSE108172.RPA2_phospho.HeLa_shASF 290 bp overlap
ChIP HeLa_shTOP1 GSE108172.RPA2_phospho.HeLa_shTOP1 403 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 131 bp overlap
SIN3A 2 datasets
ChIP A-549 ENCSR000BRM.SIN3A.A-549 122 bp overlap
ChIP Panc1 ENCFF898EEQ 417 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 619 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 470 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 397 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 329 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 619 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 619 bp overlap
SMARCA5 2 datasets
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 351 bp overlap
ChIP K562 ENCFF936KHY 207 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 178 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 144 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 605 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 142 bp overlap
SRSF3 1 dataset
ChIP Hep-G2 GSE120104.SRSF3.Hep-G2 138 bp overlap
STAT1_pS727 2 datasets
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 305 bp overlap
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 192 bp overlap
SUPT5H 1 dataset
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 177 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 59 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 252 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 207 bp overlap
TCF12 1 dataset
ChIP A-549 ENCSR000BQQ.TCF12.A-549 129 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 363 bp overlap
TFCP2L1 1 dataset
ChIP A549 ENCFF393VBT 253 bp overlap
TP53 1 dataset
ChIP IMR-90_APO GSE53491.TP53.IMR-90_APO 159 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 219 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 146 bp overlap
YY1 2 datasets
ChIP A-549 ENCSR000BPM.YY1.A-549 186 bp overlap
ChIP Huh-7 GSE97411.YY1.Huh-7 217 bp overlap
ZBTB7A 2 datasets
ChIP HEK293 ENCFF420MRZ 257 bp overlap
ChIP HEK293 ENCSR773REP.ZBTB7A.HEK293 284 bp overlap
ZC3H13 1 dataset
ChIP HepG2 ENCFF444JZJ 56 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 200 bp overlap
ZFP36 9 datasets
ChIP A-549 ENCSR294JWV.ZFP36.A-549 204 bp overlap
ChIP A549 ENCFF505LUC 112 bp overlap
ChIP GM12878 ENCFF234WRG 124 bp overlap
ChIP GM12878 ENCSR900XDB.ZFP36.GM12878 86 bp overlap
ChIP HeLa-S3 ENCFF281CEA 90 bp overlap
ChIP HeLa-S3 ENCSR184MFH.ZFP36.HeLa-S3 111 bp overlap
ChIP Hep-G2 ENCSR382XLA.ZFP36.Hep-G2 59 bp overlap
ChIP K-562 ENCSR776CYN.ZFP36.K-562 169 bp overlap
ChIP K562 ENCFF255RZG 112 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 181 bp overlap
ZMYM3 8 datasets
ChIP GM12878 GSE97661.ZMYM3.GM12878 128 bp overlap
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 123 bp overlap
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 112 bp overlap
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 173 bp overlap
ChIP HepG2 ENCFF408KTI 229 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 153 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 168 bp overlap
ChIP K562 ENCFF361LXT 175 bp overlap
ZNF143 2 datasets
ChIP Hep-G2 ENCSR080UEM.ZNF143.Hep-G2 56 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 50 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 220 bp overlap
ZNF768 4 datasets
ChIP HEK293 ENCFF579QSI 118 bp overlap
ChIP HEK293 ENCSR070HWF.ZNF768.HEK293 173 bp overlap
ChIP HEK293 GSE76494.ZNF768.HEK293 92 bp overlap
ChIP HepG2 ENCFF388QCK 242 bp overlap