chr18 : 55,438,990 55,439,594
604 bp 111 TFs 2 linked genes
This 604 bp open chromatin element is linked to TCF4 and ENSG00000267284 and is bound by 111 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TCF4 150.6 kb Distal Multiome
ENSG00000267284 150.7 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:55,433,990 – 55,444,594
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
111 transcription factors
Source
Cell type
AR 1 dataset
ChIP breast_tumor_Male_18 GSE104399.AR.breast_tumor_Male_18 201 bp overlap
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 604 bp overlap
ChIP H1 ENCFF399KAM 498 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 557 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 478 bp overlap
Ahr::Arnt 2 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BCL6B 1 dataset
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 176 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 274 bp overlap
BRD4 2 datasets
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 168 bp overlap
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 246 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 516 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 213 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 435 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 449 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 502 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 355 bp overlap
CTCF 1 dataset
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EGR2 1 dataset
ChIP HEK293 ENCFF336LFH 217 bp overlap
EP300 1 dataset
ChIP WA01 ENCSR000BKK.EP300.WA01 166 bp overlap
ERG 1 dataset
ChIP ME-1 GSE46044.ERG.ME-1 195 bp overlap
ESR1 1 dataset
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 108 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 391 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 262 bp overlap
FOXS1 2 datasets
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxj3 2 datasets
Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap
Motif ES_0h ES_0h-Foxj3_MA0851.2 9 bp overlap
Foxq1 2 datasets
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
Motif ES_0h ES_0h-Foxq1_MA0040.2 10 bp overlap
GATA6 4 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 195 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 323 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 246 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 305 bp overlap
GFI1 1 dataset
Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 321 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
HAND2 2 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 4 datasets
ChIP H1 ENCFF353UJQ 558 bp overlap
ChIP H1 ENCFF939VKA 237 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 287 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 255 bp overlap
Hand1 2 datasets
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif ES_0h ES_0h-Hand1_MA2123.1 9 bp overlap
INSM1 1 dataset
Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 254 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 370 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 189 bp overlap
KLF4 2 datasets
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 121 bp overlap
ChIP WA09_heat-shock GSE105028.KLF4.WA09_heat-shock 251 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 357 bp overlap
MYOD1 1 dataset
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 378 bp overlap
NANOG 7 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 544 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 322 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 197 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 585 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 304 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 536 bp overlap
ChIP hESC GSE18292.NANOG.hESC 101 bp overlap
NEUROG2 2 datasets
Motif DE_12h DE_12h-NEUROG2_MA1642.2 7 bp overlap
Motif ES_0h ES_0h-NEUROG2_MA1642.2 7 bp overlap
NIPBL 2 datasets
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 361 bp overlap
ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 224 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
Motif ES_0h ES_0h-NR2F1_MA1537.2 13 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_12h DE_12h-Nfatc2_MA0152.3 8 bp overlap
Nr2f6 2 datasets
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
Motif ES_0h ES_0h-Nr2f6_MA0677.2 13 bp overlap
ONECUT3 1 dataset
Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 604 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 258 bp overlap
POU5F1 4 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 507 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 414 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 288 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 375 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
PROX1 2 datasets
Motif DE_12h DE_12h-PROX1_MA0794.1 12 bp overlap
Motif ES_0h ES_0h-PROX1_MA0794.1 12 bp overlap
Pparg::Rxra 4 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 300 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
Motif ES_0h ES_0h-RARA_MA0730.1 17 bp overlap
RARA::RXRG 2 datasets
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
Motif ES_0h ES_0h-RARARXRG_MA1149.2 17 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 604 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 355 bp overlap
RBPJ 3 datasets
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 163 bp overlap
REST 1 dataset
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 163 bp overlap
RREB1 1 dataset
Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 137 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 218 bp overlap
SMAD2 2 datasets
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 371 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 276 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 284 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 191 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 430 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 490 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 446 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 358 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 258 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 564 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 433 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif ES_0h ES_0h-SOX10_MA0442.3 6 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 563 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 241 bp overlap
SOX4 2 datasets
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
Motif ES_0h ES_0h-SOX4_MA0867.3 8 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 172 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 311 bp overlap
Sox11 2 datasets
Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap
Motif ES_0h ES_0h-Sox11_MA0869.3 8 bp overlap
Sox5 2 datasets
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 217 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 121 bp overlap
TAF2 1 dataset
ChIP hESC GSE17917.TAF2.hESC 115 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 120 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 405 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 245 bp overlap
THAP1 1 dataset
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
TP53 3 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 520 bp overlap
ChIP WTC11 ENCFF359JCU 524 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 207 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 337 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 281 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 259 bp overlap
ZIC1 2 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZKSCAN5 4 datasets
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
Motif ES_0h ES_0h-ZKSCAN5_MA1652.2 9 bp overlap
ZNF135 1 dataset
Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap
ZNF184 2 datasets
ChIP WTC11 ENCFF352POG 435 bp overlap
ChIP WTC11 ENCFF352POG 445 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 246 bp overlap
ZNF214 2 datasets
Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap
Motif ES_0h ES_0h-ZNF214_MA1975.2 13 bp overlap
ZNF281 1 dataset
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF354A 1 dataset
Motif DE_12h DE_12h-ZNF354A_MA1978.2 20 bp overlap
ZNF354C 2 datasets
Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap
Motif ES_0h ES_0h-ZNF354C_MA0130.1 6 bp overlap
ZNF418 6 datasets
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif DE_12h DE_12h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
Motif ES_0h ES_0h-ZNF418_MA1980.1 15 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 317 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 262 bp overlap
ZNF490 1 dataset
ChIP HEK293 GSE76494.ZNF490.HEK293 155 bp overlap
ZNF530 3 datasets
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
Motif ES_0h ES_0h-ZNF530_MA1981.2 14 bp overlap
ZNF549 4 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF669 2 datasets
Motif DE_12h DE_12h-ZNF669_MA1985.1 15 bp overlap
Motif ES_0h ES_0h-ZNF669_MA1985.1 15 bp overlap
ZNF675 1 dataset
Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF770 2 datasets
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
ZSCAN4 1 dataset
Motif DE_12h DE_12h-ZSCAN4_MA1155.1 15 bp overlap
Zfp335 2 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap