chr18 : 7,116,063 7,116,564
501 bp 98 TFs 1 linked gene
This 501 bp open chromatin element is linked to LAMA1 and is bound by 98 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LAMA1 1.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:7,111,063 – 7,121,564
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
AR 4 datasets
ChIP LNCaP GSE80256.AR.LNCaP 175 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 221 bp overlap
ChIP WTC11 ENCFF267GQJ 297 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 368 bp overlap
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 489 bp overlap
ASH2L 1 dataset
ChIP VCaP GSE60841.ASH2L.VCaP 159 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 246 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 501 bp overlap
BRD3 3 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 135 bp overlap
ChIP U-87MG_GBM_dBET6_1d GSE99171.BRD3.U-87MG_GBM_dBET6_1d 189 bp overlap
ChIP U-87MG_GBM_dBET6_2h GSE99171.BRD3.U-87MG_GBM_dBET6_2h 133 bp overlap
BRD4 5 datasets
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 182 bp overlap
ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 222 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 341 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 369 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 137 bp overlap
CBX2 1 dataset
ChIP HepG2 ENCFF838BNI 373 bp overlap
CBX8 1 dataset
ChIP A-549 ENCSR616MOB.CBX8.A-549 212 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 365 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 173 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 483 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 339 bp overlap
CTCF 2 datasets
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 79 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 147 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 222 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 131 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 480 bp overlap
ESR1 2 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 173 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 501 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 127 bp overlap
EZH2 17 datasets
ChIP A-673 ENCSR179SAO.EZH2.A-673 306 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 169 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 328 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 195 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 501 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 297 bp overlap
ChIP SK-N-MC ENCFF674XUJ 162 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 458 bp overlap
ChIP VCaP_DHAT_2H GSE28950.EZH2.VCaP_DHAT_2H 178 bp overlap
ChIP VCaP_ETOH GSE28950.EZH2.VCaP_ETOH 444 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 266 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 445 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 335 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 501 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 106 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 455 bp overlap
ChIP keratinocyte ENCFF070STK 205 bp overlap
FOXA2 1 dataset
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 199 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 458 bp overlap
ChIP DE DE-GATA4-2 498 bp overlap
ChIP foregut GSE117136.GATA4.foregut 463 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 472 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 495 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 457 bp overlap
ChIP DE DE-GATA6-2 501 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 501 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 474 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 501 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 501 bp overlap
ChIP H9 ERP004206.GATA6.H9 254 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 501 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 501 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 501 bp overlap
ChIP foregut GSE117136.GATA6.foregut 435 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 492 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 438 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 501 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 409 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 194 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 265 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 351 bp overlap
ChIP RH4_DMSO-6H_bioMerck GSE116344.HDAC2.RH4_DMSO-6H_bioMerck 168 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 361 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 179 bp overlap
HIF1A 2 datasets
ChIP RCC10 GSE101063.HIF1A.RCC10 159 bp overlap
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 256 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 190 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 263 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 298 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 371 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 380 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 335 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 156 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 132 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 158 bp overlap
MAX 4 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 64 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 248 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 169 bp overlap
ChIP melanocyte GSE115845.MAX.melanocyte 56 bp overlap
MECP2 1 dataset
ChIP cortical-interneuron GSE117508.MECP2.cortical-interneuron 195 bp overlap
MED1 1 dataset
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 116 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 293 bp overlap
MXI1 2 datasets
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 107 bp overlap
ChIP neural cell ENCFF623HQN 288 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 105 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 120 bp overlap
MYCN 3 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 132 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 139 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 143 bp overlap
MYOG 1 dataset
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 256 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 472 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 189 bp overlap
NFE2L2 2 datasets
ChIP BEAS-2B GSE145834.NFE2L2.BEAS-2B 246 bp overlap
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 228 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 166 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 210 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 114 bp overlap
PCGF2 2 datasets
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 501 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 319 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 194 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 282 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 263 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 331 bp overlap
POU5F1 3 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 414 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 406 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 385 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 436 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 378 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 161 bp overlap
RAD21 2 datasets
ChIP neural ENCSR198ZYJ.RAD21.neural 395 bp overlap
ChIP neural cell ENCFF564MOT 340 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 329 bp overlap
RBBP5 3 datasets
ChIP H1 ENCFF905HFL 501 bp overlap
ChIP H1 ENCFF905HFL 360 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 501 bp overlap
RBPJ 2 datasets
ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 202 bp overlap
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 282 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 222 bp overlap
RNF2 3 datasets
ChIP A-549 ENCSR798EGJ.RNF2.A-549 158 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 360 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 334 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 156 bp overlap
SMAD1 1 dataset
ChIP Hep-G2 ENCSR213QOZ.SMAD1.Hep-G2 200 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 145 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 478 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 379 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 298 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 243 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 354 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 272 bp overlap
SMARCA4 6 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 224 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 501 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 274 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 390 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 310 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 215 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 153 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 189 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 501 bp overlap
ChIP neural cell ENCFF795YGY 315 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 59 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 425 bp overlap
SOX2 9 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 192 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 485 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 231 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 222 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 159 bp overlap
ChIP TT GSE46837.SOX2.TT 212 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 257 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 177 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 263 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 256 bp overlap
SUZ12 3 datasets
ChIP LNCaP GSE39459.SUZ12.LNCaP 285 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 229 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 54 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 337 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 136 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 143 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 400 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 89 bp overlap
TRIM28 2 datasets
ChIP AF22 GSE84259.TRIM28.AF22 352 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 310 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 188 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 131 bp overlap
ZNF222 1 dataset
ChIP HEK293T GSE78099.ZNF222.HEK293T 330 bp overlap
ZNF322 1 dataset
ChIP HEK293 GSE76494.ZNF322.HEK293 222 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 124 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 197 bp overlap
ZNF506 1 dataset
ChIP HEK293T GSE78099.ZNF506.HEK293T 201 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 92 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 165 bp overlap
ZNF557 1 dataset
ChIP HEK293T GSE78099.ZNF557.HEK293T 232 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 137 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 112 bp overlap